| ascaris lumbricoides | Yes | species | eukaryota | invertebrates | species | 6252 | click here |
| ateles belzebuth lymphocryptovirus 1 | Yes | species | | | species | 1093774 | click here |
| ateles fusciceps lymphocryptovirus 1 | Yes | species | | | species | 1093775 | click here |
| ateles geoffroyi lymphocryptovirus 1 | Yes | species | | | species | 1093776 | click here |
| ateles paniscus cytomegalovirus | Yes | species | | | species | 1881005 | click here |
| ateles paniscus lymphocryptovirus 1 | Yes | species | viruses and viroids | viruses | species | 209266 | click here |
| ateles paniscus polyomavirus 1 | Yes | species | | | species | 1236391 | click here |
| ateline herpesvirus 1 | Yes | species | viruses and viroids | viruses | species | 35243 | click here |
| ateline herpesvirus 2 | Yes | species | viruses and viroids | viruses | species | 10380 | click here |
| blastocystis hominis | Yes | species | eukaryota | plants | species | 12968 | click here |
| blastocystis sp. | Yes | species | eukaryota | plants | species | 46767 | click here |
| blastocystis sp. 05/170 | Yes | no rank | eukaryota | plants | species | 380404 | click here |
| blastocystis sp. 05/243 | Yes | no rank | eukaryota | plants | species | 380405 | click here |
| blastocystis sp. 05/356 | Yes | no rank | eukaryota | plants | species | 380408 | click here |
| blastocystis sp. 05/51 | Yes | no rank | eukaryota | plants | species | 380409 | click here |
| blastocystis sp. 05/542 | Yes | no rank | eukaryota | plants | species | 380411 | click here |
| blastocystis sp. 05/543 | Yes | no rank | eukaryota | plants | species | 380412 | click here |
| controrchis biliophilus | Yes | species | | | species | 1986111 | click here |
| cryptosporidium parvum | Yes | species | eukaryota | invertebrates | species | 5807 | click here |
| dipetalonema caudispina | Yes | species | | invertebrates | species | 1766039 | click here |
| dipetalonema gracile | Yes | species | eukaryota | invertebrates | species | 221945 | click here |
| dipetalonema robini | Yes | species | | | species | 1766043 | click here |
| eastern equine encephalitis virus | Yes | species | viruses and viroids | viruses | species | 11021 | click here |
| echinococcus multilocularis | Yes | species | eukaryota | invertebrates | species | 6211 | click here |
| endolimax nana | Yes | species | eukaryota | invertebrates | species | 110788 | click here |
| entamoeba dispar | Yes | species | eukaryota | invertebrates | species | 46681 | click here |
| entamoeba hartmanni | Yes | species | eukaryota | invertebrates | species | 110767 | click here |
| entamoeba histolytica | Yes | species | eukaryota | invertebrates | species | 5759 | click here |
| giardia intestinalis | Yes | species | eukaryota | invertebrates | species | 5741 | click here |
| gibbon ape leukemia virus | Yes | species | viruses and viroids | viruses | species | 11840 | click here |
| hepatitis b virus | Yes | species | viruses and viroids | viruses | species | 10407 | click here |
| human parvovirus 4 | Yes | species | viruses and viroids | viruses | species | 289365 | click here |
| hymenolepis diminuta | Yes | species | eukaryota | invertebrates | species | 6216 | click here |
| lagothrix lagotricha lymphocryptovirus 1 | Yes | species | | | species | 1093781 | click here |
| leishmania amazonensis | Yes | species | eukaryota | invertebrates | species | 5659 | click here |
| macacine herpesvirus 1 | Yes | species | viruses and viroids | viruses | species | 10325 | click here |
| mycobacterium bovis | Yes | species | bacteria | bacteria | species | 1765 | click here |
| mycobacterium tuberculosis | Yes | species | bacteria | bacteria | species | 1773 | click here |
| plasmodium brasilianum | Yes | species | eukaryota | invertebrates | species | 5824 | click here |
| plasmodium falciparum | Yes | species | eukaryota | invertebrates | species | 5833 | click here |
| plasmodium malariae | Yes | species | eukaryota | invertebrates | species | 5858 | click here |
| plasmodium simium | Yes | species | eukaryota | invertebrates | species | 5859 | click here |
| pneumocystis carinii | Yes | species | eukaryota | plants | species | 4754 | click here |
| red-faced spider monkey adenovirus | Yes | species | | | species | 2301510 | click here |
| respiratory syncytial virus | Yes | species | viruses and viroids | viruses | species | 12814 | click here |
| simian foamy virus | Yes | species | viruses and viroids | viruses | species | 11642 | click here |
| spider monkey polyomavirus | Yes | species | viruses and viroids | viruses | species | 887572 | click here |
| st. louis encephalitis virus | Yes | species | viruses and viroids | viruses | species | 11080 | click here |
| strongyloides cebus | Yes | species | eukaryota | invertebrates | species | 174719 | click here |
| strongyloides sp. 1 bsg-2017 | Yes | no rank | | | species | 1986037 | click here |
| toxoplasma gondii | Yes | species | eukaryota | invertebrates | species | 5811 | click here |
| trypanosoma cruzi | Yes | species | eukaryota | invertebrates | species | 5693 | click here |
| trypanosoma rangeli | Yes | species | eukaryota | invertebrates | species | 5698 | click here |
| trypanoxyuris atelis | Yes | species | eukaryota | invertebrates | species | 338318 | click here |
| trypanoxyuris atelophora | Yes | species | | invertebrates | species | 1630203 | click here |
| uncultured bacterium | Yes | no rank | bacteria | environmental samples | species | 77133 | click here |
| west nile virus | Yes | species | viruses and viroids | viruses | species | 11082 | click here |
| woolly monkey hepatitis b virus | Yes | species | viruses and viroids | viruses | species | 68416 | click here |
| woolly monkey sarcoma virus | Yes | species | viruses and viroids | viruses | species | 11970 | click here |
| yellow fever virus | Yes | species | viruses and viroids | viruses | species | 11089 | click here |
| yersinia pseudotuberculosis | Yes | species | bacteria | bacteria | species | 633 | click here |