| aedes aegypti | Yes | species | eukaryota | invertebrates | species | 7159 | click here |
| atadenovirus sp. | Yes | species | | | species | 2671518 | click here |
| aves polyomavirus 1 | Yes | species | | | species | 1891747 | click here |
| avian bornavirus | Yes | species | viruses and viroids | viruses | species | 675389 | click here |
| avian hepatitis e virus | Yes | no rank | viruses and viroids | viruses | no rank | 172851 | click here |
| avian polyomavirus | Yes | species | | | species | 1702318 | click here |
| bacillus licheniformis | Yes | species | bacteria | bacteria | species | 1402 | click here |
| bacillus sp. cc1 | Yes | no rank | bacteria | bacteria | species | 872952 | click here |
| bacillus sp. cc15 | Yes | no rank | bacteria | bacteria | species | 872959 | click here |
| bacillus sp. cc17 | Yes | no rank | bacteria | bacteria | species | 872960 | click here |
| bacterium cc13 | Yes | no rank | bacteria | bacteria | species | 872963 | click here |
| bacterium cc16 | Yes | no rank | bacteria | bacteria | species | 872964 | click here |
| bacterium cc6 | Yes | no rank | bacteria | bacteria | species | 872962 | click here |
| brueelia astrildae | Yes | species | | | species | 1737524 | click here |
| brueelia sp. brsp.amsu.2.9.2011.40 | Yes | no rank | | | species | 1740383 | click here |
| brueelia sp. brsp.crre.11.29.2010.16 | Yes | no rank | | | species | 1740421 | click here |
| brueelia sp. brsp.ertri.11.28.2011.2 | Yes | no rank | | | species | 1485556 | click here |
| brueelia sp. brsp.esme.11.15.2010.13 | Yes | no rank | | | species | 1740434 | click here |
| brueelia sp. brsp.hyni.11.29.2010.17 | Yes | no rank | | | species | 1740445 | click here |
| brueelia sp. brsp.larh.5.30.2012.4 | Yes | no rank | | | species | 1740454 | click here |
| brueelia sp. brsp.larh.5.30.2012.5 | Yes | no rank | | | species | 1740455 | click here |
| brueelia sp. brsp.lostr.12.11.2011.7 | Yes | no rank | | | species | 1740458 | click here |
| brueelia sp. brsp.pyaf.11.15.2010.16 | Yes | no rank | | | species | 1740500 | click here |
| brueelia sp. brsp.uran.2.9.2011.35 | Yes | no rank | | | species | 1740517 | click here |
| brueelia sp. brsp.vima.4.5.2011.4 | Yes | no rank | | | species | 1740520 | click here |
| brueelia sp. brsploleu42820125 | Yes | no rank | | | species | 1740545 | click here |
| brueelia sp. brsploleu42820126 | Yes | no rank | | | species | 1740546 | click here |
| brueelia sp. brsplostr326201233 | Yes | no rank | | | species | 1740547 | click here |
| candida albicans | Yes | species | eukaryota | plants | species | 5476 | click here |
| cryptosporidium baileyi | Yes | species | eukaryota | invertebrates | species | 27987 | click here |
| cryptosporidium galli | Yes | species | eukaryota | invertebrates | species | 218119 | click here |
| cryptosporidium sp. gf1 | Yes | no rank | eukaryota | invertebrates | species | 150833 | click here |
| cryptosporidium sp. gf2 | Yes | no rank | eukaryota | invertebrates | species | 153967 | click here |
| cryptosporidium sp. gf2_1 | Yes | no rank | eukaryota | invertebrates | species | 150835 | click here |
| cryptosporidium sp. gf2_2 | Yes | no rank | eukaryota | invertebrates | species | 150834 | click here |
| cryptosporidium sp. manon c7 | Yes | no rank | eukaryota | invertebrates | species | 742352 | click here |
| cryptosporidium sp. pf1 | Yes | no rank | eukaryota | invertebrates | species | 150836 | click here |
| culex quinquefasciatus | Yes | species | eukaryota | invertebrates | species | 7176 | click here |
| encephalitozoon cuniculi | Yes | species | eukaryota | plants | species | 6035 | click here |
| encephalitozoon hellem | Yes | species | eukaryota | plants | species | 27973 | click here |
| enterobacter cloacae | Yes | species | bacteria | bacteria | species | 550 | click here |
| enterobacter sp. cc18 | Yes | no rank | bacteria | bacteria | species | 872961 | click here |
| enterobacter sp. cc8 | Yes | no rank | bacteria | bacteria | species | 872955 | click here |
| erythrura gouldiae polyomavirus 1 | Yes | species | | | species | 2169903 | click here |
| escherichia coli | Yes | species | bacteria | bacteria | species | 562 | click here |
| estrildid finch bornavirus 1 | Yes | no rank | | | no rank | 1715295 | click here |
| estrildidae adenovirus 1 | Yes | species | | | species | 2609082 | click here |
| estrildidae adenovirus 2 | Yes | species | | | species | 2609083 | click here |
| finch polyomavirus | Yes | no rank | viruses and viroids | viruses | no rank | 349564 | click here |
| gouldian finch adenovirus 1 | Yes | species | | | species | 1391178 | click here |
| gouldian finch circovirus | Yes | species | | | species | 1221219 | click here |
| great tit adenovirus 1 | Yes | serotype | viruses and viroids | viruses | serotype | 676130 | click here |
| h5n1 subtype | Yes | no rank | viruses and viroids | viruses | no rank | 102793 | click here |
| haemoproteus sp. | Yes | species | eukaryota | invertebrates | species | 191679 | click here |
| haemoproteus sp. estmel02 | Yes | no rank | | | species | 1892086 | click here |
| haemoproteus sp. estmel03 | Yes | no rank | | | species | 1892087 | click here |
| haemoproteus sp. lonbic01 | Yes | no rank | | | species | 1892089 | click here |
| haemoproteus sp. loncuc01 | Yes | no rank | | | species | 1892090 | click here |
| haemoproteus sp. loncuc02 | Yes | no rank | | | species | 1892091 | click here |
| haemoproteus sp. neotem01 | Yes | no rank | | | species | 1199208 | click here |
| haemoproteus sp. wah26 | Yes | no rank | eukaryota | invertebrates | species | 570770 | click here |
| haemoproteus sp. wah36 | Yes | no rank | eukaryota | invertebrates | species | 570781 | click here |
| influenza a virus | Yes | species | viruses and viroids | viruses | species | 11320 | click here |
| influenza a virus (a/chestnut munia/hong kong/2442/2007(h5n1)) | Yes | no rank | viruses and viroids | viruses | no rank | 573959 | click here |
| influenza a virus (a/scaly-breasted munia/hong kong/2433/2007(h5n1)) | Yes | no rank | viruses and viroids | viruses | no rank | 573961 | click here |
| influenza a virus (a/scaly-breasted munia/hong kong/2572/2007(h5n1)) | Yes | no rank | viruses and viroids | viruses | no rank | 573958 | click here |
| influenza a virus (a/scaly-breasted munia/hong kong/45/2007(h5n1)) | Yes | no rank | viruses and viroids | viruses | no rank | 573960 | click here |
| influenza a virus (a/white-backed munia/hong kong/828/2007(h5n1)) | Yes | no rank | viruses and viroids | viruses | no rank | 573947 | click here |
| ingwavuma virus | Yes | no rank | viruses and viroids | viruses | no rank | 159145 | click here |
| isospora sp. | Yes | species | | | species | 1743397 | click here |
| klebsiella sp. cc11 | Yes | no rank | bacteria | bacteria | species | 872957 | click here |
| klebsiella sp. cc5 | Yes | no rank | bacteria | bacteria | species | 872953 | click here |
| leucocytozoon sabrazesi | Yes | species | eukaryota | invertebrates | species | 434249 | click here |
| leucocytozoon sp. | Yes | species | | | species | 1504291 | click here |
| lonchura maja polyomavirus 1 | Yes | species | | | species | 2169904 | click here |
| macrorhabdus ornithogaster | Yes | species | eukaryota | plants | species | 349299 | click here |
| micrococcus sp. cc9 | Yes | no rank | bacteria | bacteria | species | 872956 | click here |
| munia coronavirus hku13-3514 | Yes | no rank | viruses and viroids | viruses | no rank | 572289 | click here |
| mycobacterium genavense | Yes | species | bacteria | bacteria | species | 36812 | click here |
| mycoplasma gallisepticum | Yes | species | bacteria | bacteria | species | 2096 | click here |
| onychalges pachyspathus | Yes | species | | | species | 1663128 | click here |
| onychalges sp. 2 pbk-2015 | Yes | no rank | | | species | 1663129 | click here |
| passerid herpesvirus 1 | Yes | species | viruses and viroids | viruses | species | 199702 | click here |
| passerivirus sp. | Yes | species | | | species | 2065211 | click here |
| plasmodium sp. | Yes | species | eukaryota | invertebrates | species | 31272 | click here |
| plasmodium sp. lin8b | Yes | no rank | eukaryota | invertebrates | species | 445132 | click here |
| plasmodium sp. p15 | Yes | no rank | eukaryota | invertebrates | species | 399039 | click here |
| plasmodium sp. p30 | Yes | no rank | eukaryota | invertebrates | species | 392191 | click here |
| plasmodium sp. p46 | Yes | no rank | eukaryota | invertebrates | species | 392204 | click here |
| plasmodium sp. pg | Yes | no rank | eukaryota | invertebrates | species | 399040 | click here |
| plasmodium sp. urben1 | Yes | no rank | | | species | 929011 | click here |
| plasmodium sp. wa41 | Yes | no rank | eukaryota | invertebrates | species | 570820 | click here |
| plasmodium sp. wa9 | Yes | no rank | eukaryota | invertebrates | species | 570830 | click here |
| pseudomonas sp. cc4 | Yes | no rank | bacteria | bacteria | species | 418026 | click here |
| pyrrhula pyrrhula polyomavirus 1 | Yes | species | | | species | 1891751 | click here |
| ross river virus | Yes | species | viruses and viroids | viruses | species | 11029 | click here |
| rothia nasimurium | Yes | species | bacteria | bacteria | species | 85336 | click here |
| salmonella enterica subsp. enterica serovar typhimurium | Yes | no rank | bacteria | bacteria | no rank | 90371 | click here |
| serinus canaria polyomavirus | Yes | no rank | | | no rank | 2070023 | click here |
| siadenovirus sp. | Yes | species | | | species | 2671519 | click here |