| angiostrongylus dujardini | Yes | species | eukaryota | invertebrates | species | 274538 | click here |
| canine distemper virus | Yes | species | viruses and viroids | viruses | species | 11232 | click here |
| cystoisospora timoni | Yes | species | eukaryota | invertebrates | species | 242061 | click here |
| enterocytozoon bieneusi | Yes | species | eukaryota | plants | species | 31281 | click here |
| giardia intestinalis | Yes | species | eukaryota | invertebrates | species | 5741 | click here |
| influenza a virus | Yes | species | viruses and viroids | viruses | species | 11320 | click here |
| influenza a virus (a/meerkat/shanghai/sh-1/2012(h5n1)) | Yes | no rank | | | no rank | 1503714 | click here |
| japanese encephalitis virus | Yes | species | viruses and viroids | viruses | species | 11072 | click here |
| leptospira interrogans serovar copenhageni | Yes | no rank | bacteria | bacteria | no rank | 44275 | click here |
| mycobacterium africanum | Yes | species | bacteria | bacteria | species | 33894 | click here |
| mycobacterium bovis | Yes | species | bacteria | bacteria | species | 1765 | click here |
| mycobacterium goodii | Yes | species | bacteria | bacteria | species | 134601 | click here |
| mycobacterium microti | Yes | species | bacteria | bacteria | species | 1806 | click here |
| mycobacterium suricattae | Yes | species | | | species | 1688787 | click here |
| mycobacterium tuberculosis | Yes | species | bacteria | bacteria | species | 1773 | click here |
| mycobacterium tuberculosis complex sp. (ex suricata suricatta) 48 | Yes | no rank | | | species | 1871905 | click here |
| neospora caninum | Yes | species | eukaryota | invertebrates | species | 29176 | click here |
| rabies virus | Yes | species | viruses and viroids | viruses | species | 11292 | click here |
| staphylococcus aureus | Yes | species | bacteria | bacteria | species | 1280 | click here |
| toxoplasma gondii | Yes | species | eukaryota | invertebrates | species | 5811 | click here |
| uncultured babesia | Yes | no rank | eukaryota | environmental samples | species | 629240 | click here |
| uncultured bacterium | Yes | no rank | bacteria | environmental samples | species | 77133 | click here |
| uncultured cytauxzoon | Yes | no rank | | | species | 1570947 | click here |
| uncultured helicobacter sp. | Yes | no rank | bacteria | environmental samples | species | 175537 | click here |
| yersinia pseudotuberculosis | Yes | species | bacteria | bacteria | species | 633 | click here |