| aedes aegypti | Yes | species | eukaryota | invertebrates | species | 7159 | click here |
| aedes vexans | Yes | species | eukaryota | invertebrates | species | 7163 | click here |
| analges passerinus | Yes | species | eukaryota | invertebrates | species | 474139 | click here |
| atadenovirus sp. | Yes | species | | | species | 2671518 | click here |
| aviadenovirus sp. | Yes | species | | | species | 2217649 | click here |
| avian orthoavulavirus 1 | Yes | species | | | species | 2560319 | click here |
| avian polyomavirus | Yes | species | | | species | 1702318 | click here |
| avipoxvirus isolate the netherlands | Yes | species | | | species | 1294120 | click here |
| borreliella burgdorferi | Yes | species | bacteria | bacteria | species | 139 | click here |
| brueelia sp. brbre.cachl.4.16.2012.9 | Yes | no rank | | | species | 1740372 | click here |
| brueelia sp. brsp.capi.8.16.2011.6 | Yes | no rank | | | species | 1740398 | click here |
| brueelia sp. brsp.casin.10.4.2011.11 | Yes | no rank | | | species | 1740399 | click here |
| chlamydia psittaci | Yes | species | bacteria | bacteria | species | 83554 | click here |
| cryptosporidium baileyi | Yes | species | eukaryota | invertebrates | species | 27987 | click here |
| cryptosporidium galli | Yes | species | eukaryota | invertebrates | species | 218119 | click here |
| culex pipiens | Yes | species | eukaryota | invertebrates | species | 7175 | click here |
| culex pipiens pipiens | Yes | subspecies | eukaryota | invertebrates | subspecies | 38569 | click here |
| culex quinquefasciatus | Yes | species | eukaryota | invertebrates | species | 7176 | click here |
| culicoides nubeculosus | Yes | species | eukaryota | invertebrates | species | 144565 | click here |
| eastern equine encephalitis virus | Yes | species | viruses and viroids | viruses | species | 11021 | click here |
| escherichia albertii | Yes | species | bacteria | bacteria | species | 208962 | click here |
| escherichia coli | Yes | species | bacteria | bacteria | species | 562 | click here |
| etapapillomavirus 1 | Yes | species | viruses and viroids | viruses | species | 197771 | click here |
| finch polyomavirus | Yes | no rank | viruses and viroids | viruses | no rank | 349564 | click here |
| haemoproteus sp. | Yes | species | eukaryota | invertebrates | species | 191679 | click here |
| haemoproteus sp. eru-5h | Yes | no rank | | | species | 1883147 | click here |
| haemoproteus sp. hsiskin1 | Yes | no rank | eukaryota | invertebrates | species | 257647 | click here |
| haemoproteus sp. spipas01 | Yes | no rank | | | species | 2018533 | click here |
| haemoproteus sp. spisal01 | Yes | no rank | | | species | 2018535 | click here |
| haemoproteus sp. tlg-2014 | Yes | no rank | | | species | 1472038 | click here |
| haemoproteus tartakovskyi | Yes | species | eukaryota | invertebrates | species | 707206 | click here |
| highlands j virus | Yes | species | viruses and viroids | viruses | species | 11024 | click here |
| influenza a virus | Yes | species | viruses and viroids | viruses | species | 11320 | click here |
| influenza a virus (a/twite/gangcha/01/2006(h7n2)) | Yes | no rank | | | no rank | 1840642 | click here |
| influenza a virus (a/twite/gangcha/02/2006(h7n2)) | Yes | no rank | | | no rank | 1840643 | click here |
| isospora sp. | Yes | species | | | species | 1743397 | click here |
| leucocytozoon fringillinarum | Yes | species | eukaryota | invertebrates | species | 587282 | click here |
| leucocytozoon sp. | Yes | species | | | species | 1504291 | click here |
| leucocytozoon sp. colbf21 | Yes | no rank | | | species | 2018548 | click here |
| leucocytozoon sp. lsiskin2 | Yes | no rank | eukaryota | invertebrates | species | 257637 | click here |
| leucocytozoon sp. pirfla02 | Yes | no rank | | | species | 2018552 | click here |
| macrorhabdus ornithogaster | Yes | species | eukaryota | plants | species | 349299 | click here |
| mycobacterium avium | Yes | species | bacteria | bacteria | species | 1764 | click here |
| mycobacterium genavense | Yes | species | bacteria | bacteria | species | 36812 | click here |
| mycoplasma gallisepticum | Yes | species | bacteria | bacteria | species | 2096 | click here |
| mycoplasma gypis | Yes | species | bacteria | bacteria | species | 92404 | click here |
| mycoplasma sturni | Yes | species | bacteria | bacteria | species | 39047 | click here |
| myrsidea argentina | Yes | species | | | species | 2022842 | click here |
| parvoviridae sp. | Yes | species | | | species | 1940570 | click here |
| picornavirales sp. | Yes | species | | | species | 1955153 | click here |
| plasmodium ashfordi | Yes | species | | | species | 1194440 | click here |
| plasmodium circumflexum | Yes | species | | | species | 1075167 | click here |
| plasmodium delichoni | Yes | species | | | species | 1823748 | click here |
| plasmodium elongatum | Yes | species | eukaryota | invertebrates | species | 77517 | click here |
| plasmodium homocircumflexum | Yes | species | | | species | 1973199 | click here |
| plasmodium nucleophilum | Yes | species | eukaryota | invertebrates | species | 131381 | click here |
| plasmodium relictum | Yes | species | eukaryota | invertebrates | species | 85471 | click here |
| plasmodium sp. pgoldf1 | Yes | no rank | eukaryota | invertebrates | species | 407989 | click here |
| plasmodium vaughani | Yes | species | | | species | 1190499 | click here |
| proctophyllodes aff. pinnatus ad1128 | Yes | no rank | eukaryota | invertebrates | species | 799893 | click here |
| proctophyllodes cf. pinnatus ad873 | Yes | no rank | eukaryota | invertebrates | species | 799897 | click here |
| proctophyllodes pinnatus | Yes | species | eukaryota | invertebrates | species | 799887 | click here |
| proctophyllodes spini | Yes | species | eukaryota | invertebrates | species | 474270 | click here |
| pteronyssus striatus | Yes | species | | | species | | click here |
| ptilonyssus chloris | Yes | species | | | species | 2652178 | click here |
| pyrrhula pyrrhula polyomavirus 1 | Yes | species | | | species | 1891751 | click here |
| salmonella enterica | Yes | species | bacteria | bacteria | species | 28901 | click here |
| salmonella enterica subsp. enterica | Yes | subspecies | bacteria | bacteria | subspecies | 59201 | click here |
| salmonella enterica subsp. enterica serovar typhimurium | Yes | no rank | bacteria | bacteria | no rank | 90371 | click here |
| serinus canaria polyomavirus | Yes | no rank | | | no rank | 2070023 | click here |
| siadenovirus sp. | Yes | species | | | species | 2671519 | click here |
| sindbis virus | Yes | species | viruses and viroids | viruses | species | 11034 | click here |
| strelkoviacarus sp. ad771 | Yes | no rank | eukaryota | invertebrates | species | 482804 | click here |
| tick-borne encephalitis virus | Yes | species | viruses and viroids | viruses | species | 11084 | click here |
| toxoplasma gondii | Yes | species | eukaryota | invertebrates | species | 5811 | click here |
| trichomonas gallinae | Yes | species | eukaryota | invertebrates | species | 56777 | click here |
| trypanosoma sp. | Yes | species | eukaryota | invertebrates | species | 5696 | click here |
| uncultured mycoplasma sp. | Yes | no rank | bacteria | environmental samples | species | 167967 | click here |
| west nile virus | Yes | species | viruses and viroids | viruses | species | 11082 | click here |