| aichivirus a | No | species | viruses and viroids | viruses | species | 72149 | click here |
| anaplasma phagocytophilum | No | species | bacteria | bacteria | species | 948 | click here |
| angiostrongylus sp. dnus-2013-03-11-sm256 | No | no rank | | | species | 2015504 | click here |
| aspiculuris tetraptera | No | species | eukaryota | invertebrates | species | 451377 | click here |
| babesia microti | No | species | eukaryota | invertebrates | species | 5868 | click here |
| bartonella sp. rr002-1g | No | no rank | bacteria | bacteria | species | 322680 | click here |
| bartonella sp. rr0037-2g | No | no rank | bacteria | bacteria | species | 322676 | click here |
| bartonella sp. rr0039-3g | No | no rank | bacteria | bacteria | species | 322675 | click here |
| bartonella sp. rr0040-2g | No | no rank | bacteria | bacteria | species | 322678 | click here |
| bartonella sp. rr0042-1g | No | no rank | bacteria | bacteria | species | 322673 | click here |
| bartonella sp. rr0048-2g | No | no rank | bacteria | bacteria | species | 322672 | click here |
| bartonella sp. rr0051-2g | No | no rank | bacteria | bacteria | species | 322671 | click here |
| bartonella sp. rr0060-2g | No | no rank | bacteria | bacteria | species | 322670 | click here |
| bartonella sp. rt222sm | No | no rank | bacteria | bacteria | species | 228009 | click here |
| beilong virus | No | species | viruses and viroids | viruses | species | 341053 | click here |
| bertiella sp. dq4 | No | no rank | | | species | 2042605 | click here |
| betacoronavirus hku24 | No | species | | | species | 1590370 | click here |
| bordetella hinzii | No | species | bacteria | bacteria | species | 103855 | click here |
| borreliella afzelii | No | species | bacteria | bacteria | species | 29518 | click here |
| borreliella valaisiana | No | species | bacteria | bacteria | species | 62088 | click here |
| breinlia jittapalapongi | No | species | | | species | 1766042 | click here |
| capillaria hepatica | No | species | | | species | 1239592 | click here |
| cardiovirus 05vz | No | species | | | species | 1821743 | click here |
| coronaviridae sp. | No | species | | | species | 1986198 | click here |
| cryptosporidium parvum | No | species | eukaryota | invertebrates | species | 5807 | click here |
| cryptosporidium sp. rat genotype ii | No | no rank | eukaryota | invertebrates | species | 698774 | click here |
| cryptosporidium suis | No | species | eukaryota | invertebrates | species | 396558 | click here |
| gongylonema neoplasticum | No | species | | | species | 1616033 | click here |
| hantavirus jurong tjk/06(rt49) | No | no rank | viruses and viroids | viruses | species | 659338 | click here |
| hantavirus jurong tjk/06(rt50) | No | no rank | viruses and viroids | viruses | species | 659339 | click here |
| hunnivirus 05vz | No | species | | | species | 1821753 | click here |
| hunnivirus 83gr | No | species | | | species | 1821754 | click here |
| hydatigera taeniaeformis | No | species | eukaryota | invertebrates | species | 6205 | click here |
| hymenolepis diminuta | No | species | eukaryota | invertebrates | species | 6216 | click here |
| hymenolepis nana | No | species | eukaryota | invertebrates | species | 102285 | click here |
| jingmen tick virus | No | no rank | | | no rank | 1491393 | click here |
| kobuvirus 05vz | No | species | | | species | 1821745 | click here |
| kobuvirus 83gr | No | species | | | species | 1821746 | click here |
| leptospira interrogans | No | species | bacteria | bacteria | species | 173 | click here |
| longquan aa mouse coronavirus | No | species | | | species | 1508222 | click here |
| longquan rl rat coronavirus | No | species | | | species | 1508223 | click here |
| moniliformis moniliformis | No | species | eukaryota | invertebrates | species | 10237 | click here |
| murine coronavirus | No | species | viruses and viroids | viruses | species | 694005 | click here |
| murine kobuvirus 1 | No | no rank | | | no rank | 1141624 | click here |
| niviventer confucianus picornavirus | No | species | | | species | 2184396 | click here |
| orientia tsutsugamushi | No | species | bacteria | bacteria | species | 784 | click here |
| orthohantavirus sp. | No | species | | | species | 2022413 | click here |
| orthohepevirus a | No | species | | | species | 1678143 | click here |
| paramyxoviridae sp. | No | species | | | species | 1663356 | click here |
| paramyxovirus predict_pmv-58 | No | species | | | species | 1647258 | click here |
| pegivirus sp. | No | species | | | species | 2498143 | click here |
| phenuiviridae sp. | No | species | | | species | 2585232 | click here |
| picornaviridae sp. | No | species | | | species | 1530251 | click here |
| pneumocystis wakefieldiae | No | species | eukaryota | plants | species | 38082 | click here |
| polyplax spinulosa | No | species | eukaryota | invertebrates | species | 468197 | click here |
| rabovirus a | No | species | | | species | 1603962 | click here |
| rat adeno-associated virus | No | species | | | species | 2303482 | click here |
| rat astrovirus | No | species | | | species | 2039491 | click here |
| rat bocavirus | No | species | | | species | 1788315 | click here |
| rat mammarenavirus | No | species | | | species | 2479483 | click here |
| rattus tanezumi adenovirus | No | species | | | species | 1819366 | click here |
| rattus tanezumi hunnivirus | No | species | | | species | 2184404 | click here |
| rattus tanezumi parechovirus | No | species | | | species | 2184405 | click here |
| rhabdoviridae sp. | No | species | | | species | 1955137 | click here |
| riboviria sp. | No | species | | | species | 2585031 | click here |
| rodent associated cyclovirus 2 | Yes | species | | | species | 2560715 | click here |
| rodent astrovirus | No | species | | | species | 1914442 | click here |
| rodent coronavirus | No | species | | | species | 2050018 | click here |
| rodent hepevirus | No | species | | | species | 2126132 | click here |
| rodent pegivirus | No | species | viruses and viroids | viruses | species | 1321391 | click here |
| rodent torque teno virus 3 | No | species | | | species | 2054610 | click here |
| seoul orthohantavirus | No | species | | | species | 1980490 | click here |
| serang virus | No | species | viruses and viroids | viruses | species | 528322 | click here |
| syphacia muris | No | species | eukaryota | invertebrates | species | 451379 | click here |
| theileria youngi | No | species | eukaryota | invertebrates | species | 119759 | click here |
| torque teno virus 3 | No | species | viruses and viroids | viruses | species | 687342 | click here |
| uncultured anaplasma sp. | No | no rank | bacteria | environmental samples | species | 319051 | click here |
| uncultured bartonella sp. | No | no rank | bacteria | environmental samples | species | 104108 | click here |
| uncultured ehrlichia sp. | No | no rank | bacteria | environmental samples | species | 249170 | click here |
| uncultured leptospira sp. | No | no rank | bacteria | environmental samples | species | 253437 | click here |
| uncultured orientia sp. | No | no rank | bacteria | environmental samples | species | 543121 | click here |
| wenzhou rattus tanezumi pegivirus 1 | No | species | | | species | 2832090 | click here |
| wenzhou virus | No | species | | | species | 1588685 | click here |
| xingyi virus | No | species | | | species | 2201416 | click here |