| actinomyces sp. a1(2015) | Yes | no rank | | | species | 1769425 | click here |
| actinomyces sp. c10 | Yes | no rank | | | species | 1769418 | click here |
| actinomyces sp. js11 | Yes | no rank | | | species | 1769419 | click here |
| actinomyces sp. js16 | Yes | no rank | | | species | 1769420 | click here |
| aedes aegypti | Yes | species | eukaryota | invertebrates | species | 7159 | click here |
| aedes esoensis | Yes | species | eukaryota | invertebrates | species | 373843 | click here |
| aedes japonicus | Yes | species | eukaryota | invertebrates | species | 140438 | click here |
| aedes japonicus japonicus | Yes | subspecies | eukaryota | invertebrates | subspecies | 140439 | click here |
| akabane virus | Yes | species | viruses and viroids | viruses | species | 70566 | click here |
| alcelaphine herpesvirus 1 | Yes | species | viruses and viroids | viruses | species | 35252 | click here |
| alcelaphine herpesvirus 2 | Yes | species | viruses and viroids | viruses | species | 138184 | click here |
| amblyomma testudinarium | Yes | species | eukaryota | invertebrates | species | 375577 | click here |
| anaeromyces mucronatus | Yes | species | eukaryota | plants | species | 994854 | click here |
| anaplasma bovis | Yes | species | bacteria | bacteria | species | 186733 | click here |
| anaplasma centrale | Yes | species | bacteria | bacteria | species | 769 | click here |
| anaplasma marginale | Yes | species | bacteria | bacteria | species | 770 | click here |
| anaplasma ovis | Yes | species | bacteria | bacteria | species | 142058 | click here |
| anaplasma phagocytophilum | Yes | species | bacteria | bacteria | species | 948 | click here |
| anaplasma platys | Yes | species | bacteria | bacteria | species | 949 | click here |
| anaplasma sp. 1-ap-2016 | Yes | no rank | | | species | 1811197 | click here |
| anaplasma sp. ac30b | Yes | no rank | bacteria | bacteria | species | 889305 | click here |
| anaplasma sp. ac48d | Yes | no rank | bacteria | bacteria | species | 889301 | click here |
| anaplasma sp. ac52d | Yes | no rank | bacteria | bacteria | species | 889303 | click here |
| anaplasma sp. ac70-06d | Yes | no rank | bacteria | bacteria | species | 889302 | click here |
| anaplasma sp. hlj-14 | Yes | no rank | | | species | 1562740 | click here |
| anaplasma sp. reddeer1/1 | Yes | no rank | | | species | 1387254 | click here |
| anaplasma sp. reddeer1/2 | Yes | no rank | | | species | 1387255 | click here |
| anaplasma sp. sika10 | Yes | no rank | | | species | 1593131 | click here |
| anaplasma sp. sika11 | Yes | no rank | | | species | 1593132 | click here |
| anaplasma sp. sika12 | Yes | no rank | | | species | 1593133 | click here |
| anaplasma sp. sika14 | Yes | no rank | | | species | 1593134 | click here |
| anaplasma sp. sika3 | Yes | no rank | | | species | 1593126 | click here |
| anaplasma sp. sika5 | Yes | no rank | | | species | 1593127 | click here |
| anaplasma sp. sika6 | Yes | no rank | | | species | 1593128 | click here |
| anaplasma sp. sika7 | Yes | no rank | | | species | 1593129 | click here |
| anaplasma sp. sika9 | Yes | no rank | | | species | 1593130 | click here |
| ashworthius sidemi | Yes | species | eukaryota | invertebrates | species | 126389 | click here |
| axis porcinus gammaherpesvirus 1 | Yes | species | | | species | 2716967 | click here |
| babesia bigemina | Yes | species | eukaryota | invertebrates | species | 5866 | click here |
| babesia capreoli | Yes | species | eukaryota | invertebrates | species | 308426 | click here |
| babesia cf. divergens | Yes | subspecies | eukaryota | invertebrates | species | 740948 | click here |
| babesia cf. odocoilei | Yes | no rank | | | species | 1078082 | click here |
| babesia divergens | Yes | species | eukaryota | invertebrates | species | 32595 | click here |
| babesia duncani | Yes | species | eukaryota | invertebrates | species | 323732 | click here |
| babesia motasi | Yes | species | eukaryota | invertebrates | species | 237580 | click here |
| babesia odocoilei | Yes | species | eukaryota | invertebrates | species | 36766 | click here |
| babesia sp. | Yes | species | eukaryota | invertebrates | species | 35084 | click here |
| babesia sp. 1 mj-2013 | Yes | no rank | | | species | 1401113 | click here |
| babesia sp. 899-8 | Yes | no rank | eukaryota | invertebrates | species | 940460 | click here |
| babesia sp. 968-9 | Yes | no rank | eukaryota | invertebrates | species | 940461 | click here |
| babesia sp. ex cervus nippon | Yes | no rank | | | species | 1354810 | click here |
| babesia sp. fd1 | Yes | no rank | eukaryota | invertebrates | species | 323729 | click here |
| babesia sp. jl-2016a | Yes | no rank | | | species | 1813786 | click here |
| babesia sp. red deer/g1/irl | Yes | no rank | eukaryota | invertebrates | species | 740949 | click here |
| babesia sp. 'venatorum' | Yes | no rank | eukaryota | invertebrates | species | 171411 | click here |
| bacillus anthracis | Yes | species | bacteria | bacteria | species | 1392 | click here |
| bacillus cereus | Yes | species | bacteria | bacteria | species | 1396 | click here |
| bacillus subtilis | Yes | species | bacteria | bacteria | species | 1423 | click here |
| bacillus thuringiensis | Yes | species | bacteria | bacteria | species | 1428 | click here |
| bacterium | Yes | no rank | | | species | 1869227 | click here |
| bartonella bovis | Yes | species | bacteria | bacteria | species | 155194 | click here |
| bartonella capreoli | Yes | species | bacteria | bacteria | species | 155192 | click here |
| bartonella chomelii | Yes | species | bacteria | bacteria | species | 236402 | click here |
| bartonella henselae | Yes | species | bacteria | bacteria | species | 38323 | click here |
| bartonella schoenbuchensis | Yes | species | bacteria | bacteria | species | 165694 | click here |
| bartonella sp. | Yes | species | bacteria | bacteria | species | 46358 | click here |
| bartonella sp. 'elk-1' | Yes | no rank | bacteria | bacteria | species | 122269 | click here |
| bartonella sp. 'elk-2' | Yes | no rank | bacteria | bacteria | species | 122270 | click here |
| bartonella sp. 'elk-3' | Yes | no rank | bacteria | bacteria | species | 122271 | click here |
| bartonella sp. wd12.1 | Yes | no rank | | | species | 1933903 | click here |
| bartonella sp. wd16.2 | Yes | no rank | | | species | 1933904 | click here |
| batai virus | Yes | no rank | viruses and viroids | viruses | no rank | 80942 | click here |
| besnoitia besnoiti | Yes | species | eukaryota | invertebrates | species | 94643 | click here |
| besnoitia tarandi | Yes | species | eukaryota | invertebrates | species | 279368 | click here |
| bhanja virus | Yes | species | | | species | 1213620 | click here |
| bicaulus sagittatus | Yes | species | | | species | | click here |
| blastocystis sp. | Yes | species | eukaryota | plants | species | 46767 | click here |
| blastocystis sp. subtype 1 | Yes | no rank | eukaryota | plants | species | 944036 | click here |
| blastocystis sp. subtype 1 strain chimp23 | Yes | no rank | eukaryota | plants | no rank | 926707 | click here |
| blastocystis sp. subtype 10 | Yes | no rank | eukaryota | plants | species | 944207 | click here |
| blastocystis sp. subtype 13 | Yes | no rank | eukaryota | plants | species | 708184 | click here |
| blastocystis sp. subtype 14 | Yes | no rank | | | species | 1202666 | click here |
| blastocystis sp. subtype 3 | Yes | no rank | eukaryota | plants | species | 944168 | click here |
| blastocystis sp. subtype 5 | Yes | no rank | eukaryota | plants | species | 944169 | click here |
| bluetongue virus | Yes | species | viruses and viroids | viruses | species | 40051 | click here |
| bluetongue virus 1 | Yes | no rank | viruses and viroids | viruses | no rank | 35327 | click here |
| bluetongue virus 21 | Yes | no rank | viruses and viroids | viruses | no rank | 45030 | click here |
| border disease virus | Yes | species | viruses and viroids | viruses | species | 358764 | click here |
| borrelia sp. | Yes | no rank | bacteria | bacteria | species | 145 | click here |
| borreliella afzelii | Yes | species | bacteria | bacteria | species | 29518 | click here |
| borreliella burgdorferi | Yes | species | bacteria | bacteria | species | 139 | click here |
| bovine coronavirus | Yes | no rank | viruses and viroids | viruses | no rank | 11128 | click here |
| bovine ephemeral fever virus | Yes | species | viruses and viroids | viruses | species | 11303 | click here |
| bovine foamy virus | Yes | species | viruses and viroids | viruses | species | 207343 | click here |
| bovine hepacivirus | Yes | species | viruses and viroids | viruses | species | 1633878 | click here |
| bovine herpesvirus 1 | Yes | species | viruses and viroids | viruses | species | 10320 | click here |
| bovine herpesvirus 2 | Yes | species | viruses and viroids | viruses | species | 10295 | click here |
| bovine herpesvirus 4 | Yes | species | viruses and viroids | viruses | species | 10385 | click here |
| bovine herpesvirus 6 | Yes | species | | viruses | species | 1504288 | click here |
| bovine mastadenovirus a | Yes | species | viruses and viroids | viruses | species | 129953 | click here |