| a-2 plaque virus | Yes | no rank | viruses and viroids | viruses | no rank | 120087 | click here |
| acholeplasma cavigenitalium | Yes | species | bacteria | bacteria | species | 264633 | click here |
| acidaminococcus fermentans | Yes | species | bacteria | bacteria | species | 905 | click here |
| acinetobacter sp. 352m1 | Yes | no rank | | | species | 741099 | click here |
| acinetobacter sp. 352m2 | Yes | no rank | | | species | 741100 | click here |
| acinetobacter sp. 352m3 | Yes | no rank | | | species | 741101 | click here |
| acinetobacter sp. 352m4 | Yes | no rank | | | species | 741102 | click here |
| acinetobacter sp. 352m5 | Yes | no rank | | | species | 741103 | click here |
| acinetobacter sp. 352n | Yes | no rank | | | species | 741104 | click here |
| acinetobacter sp. 353m | Yes | no rank | | | species | 741105 | click here |
| acinetobacter sp. 355m | Yes | no rank | | | species | 741106 | click here |
| acinetobacter sp. 360n | Yes | no rank | | | species | 741107 | click here |
| acinetobacter sp. anc 5347 | Yes | no rank | | | species | 2053290 | click here |
| adeno-associated virus | Yes | species | viruses and viroids | viruses | species | 272636 | click here |
| adenovirus predict_adv-17 | Yes | species | | | species | 2710950 | click here |
| aedes aegypti | Yes | species | eukaryota | invertebrates | species | 7159 | click here |
| aedes albopictus | Yes | species | eukaryota | invertebrates | species | 7160 | click here |
| aeromonas caviae | Yes | species | bacteria | bacteria | species | 648 | click here |
| aeromonas dhakensis | Yes | species | bacteria | bacteria | species | 196024 | click here |
| agrobacterium sp. 355mo | Yes | no rank | | | species | 741109 | click here |
| alagoas vesiculovirus | Yes | species | | | species | 1972579 | click here |
| alloscardovia sp. moziv/2 | Yes | no rank | | | species | 1769421 | click here |
| alternaria alternata | Yes | species | eukaryota | plants | species | 5599 | click here |
| amblyomma coelebs | Yes | species | eukaryota | invertebrates | species | 251378 | click here |
| amblyomma dubitatum | Yes | species | eukaryota | invertebrates | species | 321419 | click here |
| amblyomma extraoculatum | Yes | species | eukaryota | invertebrates | species | 251382 | click here |
| amblyomma pacae | Yes | species | eukaryota | invertebrates | species | 251390 | click here |
| amblyomma parvum | Yes | species | eukaryota | invertebrates | species | 251391 | click here |
| amblyomma romitii | Yes | species | | | species | 1283706 | click here |
| amblyomma sculptum | Yes | species | | | species | 1581419 | click here |
| amblyomma tigrinum | Yes | species | eukaryota | invertebrates | species | 251399 | click here |
| anelloviridae sp. | Yes | species | | | species | 2055263 | click here |
| angiostrongylus cantonensis | Yes | species | eukaryota | invertebrates | species | 6313 | click here |
| angiostrongylus mackerrasae | Yes | species | | | species | 1659310 | click here |
| anisakis simplex | Yes | species | eukaryota | invertebrates | species | 6269 | click here |
| anopheles albimanus | Yes | species | eukaryota | invertebrates | species | 7167 | click here |
| anopheles arabiensis | Yes | species | eukaryota | invertebrates | species | 7173 | click here |
| anopheles beklemishevi | Yes | species | eukaryota | invertebrates | species | 210816 | click here |
| anopheles coluzzii | Yes | species | | | species | 1518534 | click here |
| anopheles dirus | Yes | species | eukaryota | invertebrates | species | 7168 | click here |
| anopheles farauti | Yes | species | eukaryota | invertebrates | species | 69004 | click here |
| anopheles freeborni | Yes | species | eukaryota | invertebrates | species | 7170 | click here |
| anopheles gambiae | Yes | species | eukaryota | invertebrates | species | 7165 | click here |
| anopheles gambiae s | Yes | no rank | eukaryota | invertebrates | no rank | 377270 | click here |
| anopheles maculipennis | Yes | species | eukaryota | invertebrates | species | 41429 | click here |
| anopheles quadrimaculatus | Yes | species | eukaryota | invertebrates | species | 7166 | click here |
| anopheles stephensi | Yes | species | eukaryota | invertebrates | species | 30069 | click here |
| anoplocephalinae sp. f161-080313-1-6 | Yes | no rank | | | species | 1407639 | click here |
| anoplocephalinae sp. f161-110313-1 | Yes | no rank | | | species | 1407640 | click here |
| anoplocephalinae sp. m581-6-210513-1 | Yes | no rank | | | species | 1430007 | click here |
| argentinian mammarenavirus | Yes | species | | | species | 2169991 | click here |
| armigeres subalbatus | Yes | species | eukaryota | invertebrates | species | 124917 | click here |
| aroa virus | Yes | species | viruses and viroids | viruses | species | 64303 | click here |
| arthrobacter sp. 352g | Yes | no rank | | | species | 741127 | click here |
| arthrobacter sp. 387n | Yes | no rank | | | species | 741128 | click here |
| arthrobacter sp. 391g | Yes | no rank | | | species | 741129 | click here |
| arthroderma benhamiae | Yes | species | eukaryota | plants | species | 63400 | click here |
| arthroderma otae | Yes | species | eukaryota | plants | species | 63405 | click here |
| arthroderma vanbreuseghemii | Yes | species | eukaryota | plants | species | 63407 | click here |
| ascaris lumbricoides | Yes | species | eukaryota | invertebrates | species | 6252 | click here |
| ascaris suum | Yes | species | eukaryota | invertebrates | species | 6253 | click here |
| aspergillus pseudoglaucus | Yes | species | | | species | 1405805 | click here |
| avian infectious bronchitis virus (strain m41) | Yes | no rank | viruses and viroids | viruses | no rank | 11127 | click here |
| babesia sp. | Yes | species | eukaryota | invertebrates | species | 35084 | click here |
| babesia sp. capybara 1 | Yes | no rank | eukaryota | invertebrates | species | 441542 | click here |
| babesia sp. dma-2015 | Yes | no rank | | | species | 1685121 | click here |
| bacilli bacterium | Yes | species | | | species | 1903720 | click here |
| bacterium ps7 | Yes | no rank | bacteria | bacteria | species | 92173 | click here |
| bacteroidales bacterium | Yes | species | | | species | 2030927 | click here |
| bacteroidales bacterium gp1 | Yes | species | | | species | 1807745 | click here |
| bacteroidales bacterium gp2 | Yes | species | | | species | 1807746 | click here |
| bacteroidales bacterium gp3 | Yes | species | | | species | 1807747 | click here |
| bacteroidales bacterium gp4 | Yes | species | | | species | 1807748 | click here |
| bacteroides faecichinchillae | Yes | species | | | species | 871325 | click here |
| bacteroides heparinolyticus | Yes | species | bacteria | bacteria | species | 28113 | click here |
| bacteroides rodentium | Yes | species | bacteria | bacteria | species | 691816 | click here |
| bacteroides sartorii | Yes | species | bacteria | bacteria | species | 671267 | click here |
| bacteroides stercorirosoris | Yes | species | | | species | 871324 | click here |
| bartonella henselae | Yes | species | bacteria | bacteria | species | 38323 | click here |
| bartonella sp. | Yes | species | bacteria | bacteria | species | 46358 | click here |
| baylisascaris procyonis | Yes | species | eukaryota | invertebrates | species | 6259 | click here |
| berne virus | Yes | no rank | viruses and viroids | viruses | no rank | 11156 | click here |
| bhanja virus | Yes | species | | | species | 1213620 | click here |
| bifidobacterium animalis subsp. animalis mcc 1489 | Yes | no rank | | | no rank | 1365957 | click here |
| bifidobacterium pseudolongum subsp. globosum | Yes | subspecies | bacteria | bacteria | subspecies | 1690 | click here |
| bisgaard taxon 5 | Yes | no rank | bacteria | bacteria | species | 28159 | click here |
| bisgaard taxon 7 | Yes | no rank | bacteria | bacteria | species | 28161 | click here |
| blastocystis hominis | Yes | species | eukaryota | plants | species | 12968 | click here |
| blastocystis ratti | Yes | species | eukaryota | plants | species | 82344 | click here |
| blastocystis sp. | Yes | species | eukaryota | plants | species | 46767 | click here |
| blastocystis sp. jfxw-2015 | Yes | no rank | | | species | 1721106 | click here |
| blastocystis sp. subtype 17 | Yes | no rank | | | species | 1260460 | click here |
| blastocystis sp. subtype 4 | Yes | no rank | eukaryota | plants | species | 944170 | click here |
| blastocystis sp. subtype 5 | Yes | no rank | eukaryota | plants | species | 944169 | click here |
| blautia sp. | Yes | species | | | species | 1955243 | click here |
| bordetella bronchiseptica | Yes | species | bacteria | bacteria | species | 518 | click here |
| bordetella bronchiseptica mbord665 | Yes | no rank | | | no rank | 1331224 | click here |
| bordetella bronchiseptica mbord668 | Yes | no rank | | | no rank | 1331225 | click here |
| bordetella bronchiseptica mbord670 | Yes | no rank | | | no rank | 1331226 | click here |
| bordetella bronchiseptica mbord678 | Yes | no rank | | | no rank | 1331228 | click here |