| acetobacter tropicalis | No | species | bacteria | bacteria | species | 104102 | click here |
| agrobacterium rhizogenes | No | species | bacteria | bacteria | species | 359 | click here |
| agrobacterium sp. 13-626 | No | no rank | | | species | 1841652 | click here |
| agrobacterium tumefaciens | No | species | bacteria | bacteria | species | 358 | click here |
| alternaria alternata | No | species | eukaryota | plants | species | 5599 | click here |
| alternaria arborescens | No | species | eukaryota | plants | species | 156630 | click here |
| alternaria botrytis | No | species | eukaryota | plants | species | 119956 | click here |
| alternaria calycipyricola | No | species | | | species | 1187907 | click here |
| alternaria destruens | No | species | eukaryota | plants | species | 230003 | click here |
| alternaria rosae | No | species | | | species | 1187941 | click here |
| alternaria sp. | No | species | | | species | 1715220 | click here |
| alternaria sp. gxglb-1 | No | no rank | | | species | 1761473 | click here |
| alternaria sp. lhb1 | No | no rank | | | species | 1424340 | click here |
| alternaria tenuissima | No | species | eukaryota | plants | species | 119927 | click here |
| apple chlorotic leaf spot virus | No | species | viruses and viroids | viruses | species | 12175 | click here |
| apple dimple fruit viroid | No | species | viruses and viroids | viruses | species | 73494 | click here |
| apple mosaic virus | No | species | viruses and viroids | viruses | species | 12319 | click here |
| apple rubbery wood virus 2 | No | no rank | | | no rank | 2164103 | click here |
| apple scar skin viroid | No | species | viruses and viroids | viruses | species | 12895 | click here |
| apple stem grooving virus | No | species | viruses and viroids | viruses | species | 28347 | click here |
| apple stem pitting virus | No | species | viruses and viroids | viruses | species | 35350 | click here |
| aster yellows phytoplasma | No | subspecies | bacteria | bacteria | species | 35779 | click here |
| athelia bombacina | No | species | eukaryota | plants | species | 5310 | click here |
| bacillus amyloliquefaciens | No | species | bacteria | bacteria | species | 1390 | click here |
| biscogniauxia rosacearum | No | species | | | species | 1765962 | click here |
| botryosphaeria berengeriana f. sp. pyricola | No | no rank | eukaryota | plants | no rank | 760146 | click here |
| botryosphaeria dothidea | No | species | eukaryota | plants | species | 55169 | click here |
| botryosphaeria sp. gs-2014 | No | no rank | | | species | 1480134 | click here |
| botrytis cinerea | No | species | eukaryota | plants | species | 40559 | click here |
| candidatus phytoplasma mali | No | subspecies | bacteria | bacteria | species | 37692 | click here |
| candidatus phytoplasma prunorum | No | subspecies | bacteria | bacteria | species | 47565 | click here |
| candidatus phytoplasma pyri | No | subspecies | bacteria | bacteria | species | 47566 | click here |
| carposina sasakii | No | species | eukaryota | invertebrates | species | 252295 | click here |
| cauliflower mosaic virus | No | species | viruses and viroids | viruses | species | 10641 | click here |
| cherry virus turkey | No | species | | | species | 2506409 | click here |
| citrus concave gum-associated virus | No | no rank | | | no rank | 2024604 | click here |
| citrus virus a | No | species | | | species | 2484986 | click here |
| cladosporium sp. cpc 15516 | No | no rank | eukaryota | plants | species | 706149 | click here |
| claroideoglomus lamellosum | No | species | eukaryota | plants | species | 118615 | click here |
| claroideoglomus sp. | No | species | | | species | 1913634 | click here |
| coccus hesperidum | No | species | eukaryota | invertebrates | species | 538890 | click here |
| colletotrichum acutatum | No | species | eukaryota | plants | species | 27357 | click here |
| colletotrichum fioriniae | No | species | eukaryota | plants | species | 710243 | click here |
| colletotrichum fructicola | No | species | eukaryota | plants | species | 690256 | click here |
| colletotrichum gloeosporioides | No | species | eukaryota | plants | species | 474922 | click here |
| colletotrichum siamense | No | species | eukaryota | plants | species | 690259 | click here |
| cucumber mosaic virus | No | species | viruses and viroids | viruses | species | 12305 | click here |
| cyphellophora sessilis | No | species | eukaryota | plants | species | 293231 | click here |
| cystofilobasidium capitatum | No | species | eukaryota | plants | species | 5412 | click here |
| cytospora ceratosperma | No | species | | | species | 1928361 | click here |
| cytospora leucostoma | No | species | eukaryota | plants | species | 1230097 | click here |
| cytospora sacculus | No | species | eukaryota | plants | species | 252746 | click here |
| cytospora sp. | No | species | | | species | 1715226 | click here |
| diaporthe ambigua | No | species | eukaryota | plants | species | 73123 | click here |
| diaporthe brasiliensis | No | species | | | species | 1304153 | click here |
| diaporthe eres | No | species | eukaryota | plants | species | 83184 | click here |
| diaporthe foeniculina | No | species | eukaryota | plants | species | 1469663 | click here |
| diaporthe inconspicua | No | species | | | species | 1303583 | click here |
| diaporthe infecunda | No | species | | | species | 1303584 | click here |
| diaporthe nobilis | No | species | | | species | 1303587 | click here |
| diaporthe oxe | No | species | | | species | 1304157 | click here |
| diaporthe perseae | No | species | eukaryota | plants | species | 291058 | click here |
| diaporthe phaseolorum | No | species | eukaryota | plants | species | 36923 | click here |
| diaporthe rudis | No | species | eukaryota | plants | species | 1469661 | click here |
| diaporthe sp. | No | species | | | species | 1756133 | click here |
| diaporthe sp. 1 ls-2016 | No | no rank | | | species | 1783467 | click here |
| diaporthe sp. 2 ls-2016 | No | no rank | | | species | 1783468 | click here |
| diaporthe terebinthifolii | No | species | | | species | 1303642 | click here |
| dickeya fangzhongdai | No | species | | | species | 1778540 | click here |
| didymella macrostoma | No | species | eukaryota | plants | species | 73002 | click here |
| diplodia bulgarica | No | species | eukaryota | plants | species | 856259 | click here |
| diplodia intermedia | No | species | eukaryota | plants | species | 856260 | click here |
| diplodia malorum | No | species | eukaryota | plants | species | 856253 | click here |
| diplodia mutila | No | species | eukaryota | plants | species | 85927 | click here |
| diplodia seriata | No | species | eukaryota | plants | species | 420778 | click here |
| dothiorella omnivora | No | species | | | species | 1873931 | click here |
| dothiorella sarmentorum | No | species | eukaryota | plants | species | 240345 | click here |
| elsinoe piri | No | species | | | species | 1978816 | click here |
| enterobacter sp. en113 | No | no rank | | | species | 1751923 | click here |
| enterobacter sp. en23 | No | no rank | | | species | 1751924 | click here |
| enterococcus mundtii | No | species | bacteria | bacteria | species | 53346 | click here |
| epicoccum nigrum | No | species | eukaryota | plants | species | 105696 | click here |
| epicoccum sp. eshn2 | No | no rank | | | species | 1768421 | click here |
| epidiaspis leperii | No | species | eukaryota | invertebrates | species | 340556 | click here |
| eriophyes pyri | No | species | eukaryota | invertebrates | species | 483436 | click here |
| erwinia amylovora | No | species | bacteria | bacteria | species | 552 | click here |
| erwinia billingiae | No | species | bacteria | bacteria | species | 182337 | click here |
| erwinia gerundensis | No | species | | | species | 1619313 | click here |
| erwinia piriflorinigrans | No | species | bacteria | bacteria | species | 665097 | click here |
| erwinia sp. cfbp 5882 | No | no rank | bacteria | bacteria | species | 665098 | click here |
| euzophera pyriella | No | species | | | species | 1306844 | click here |
| ewingella americana | No | species | bacteria | bacteria | species | 41202 | click here |
| fibulorhizoctonia psychrophila | No | species | | | species | 1759441 | click here |
| fomitiporia mediterranea | No | species | eukaryota | plants | species | 208960 | click here |
| fungal sp. l-0301 | No | no rank | | | species | 1585463 | click here |
| fusarium avenaceum | No | species | eukaryota | plants | species | 40199 | click here |
| fusarium fujikuroi | No | species | eukaryota | plants | species | 5127 | click here |
| fusarium oxysporum | No | species | eukaryota | plants | species | 5507 | click here |
| fusarium proliferatum | No | species | eukaryota | plants | species | 948311 | click here |
| fusarium solani | No | species | eukaryota | plants | species | 169388 | click here |