| adeno-associated virus | Yes | species | viruses and viroids | viruses | species | 272636 | click here |
| aeromonas dhakensis | Yes | species | bacteria | bacteria | species | 196024 | click here |
| blastocystis sp. | Yes | species | eukaryota | plants | species | 46767 | click here |
| blastocystis sp. subtype 4 | Yes | no rank | eukaryota | plants | species | 944170 | click here |
| blastocystis sp. subtype 5 | Yes | no rank | eukaryota | plants | species | 944169 | click here |
| bovine parainfluenza virus 3 | Yes | species | viruses and viroids | viruses | species | 11215 | click here |
| capillaria hepatica | Yes | species | | | species | 1239592 | click here |
| cardiovirus a | Yes | species | | | species | 1821749 | click here |
| cryptosporidium parvum | Yes | species | eukaryota | invertebrates | species | 5807 | click here |
| cryptosporidium ubiquitum | Yes | species | eukaryota | invertebrates | species | 857276 | click here |
| dicrocoelium dendriticum | Yes | species | eukaryota | invertebrates | species | 57078 | click here |
| echinococcus granulosus | Yes | species | eukaryota | invertebrates | species | 6210 | click here |
| echinococcus multilocularis | Yes | species | eukaryota | invertebrates | species | 6211 | click here |
| echinococcus vogeli | Yes | species | eukaryota | invertebrates | species | 6213 | click here |
| emmonsia crescens | Yes | species | eukaryota | plants | species | 73230 | click here |
| encephalomyocarditis virus | Yes | no rank | viruses and viroids | viruses | no rank | 12104 | click here |
| enterocytozoon bieneusi | Yes | species | eukaryota | plants | species | 31281 | click here |
| fasciola hepatica | Yes | species | eukaryota | invertebrates | species | 6192 | click here |
| francisella tularensis | Yes | species | bacteria | bacteria | species | 263 | click here |
| giardia intestinalis | Yes | species | eukaryota | invertebrates | species | 5741 | click here |
| heterobilharzia americana | Yes | species | eukaryota | invertebrates | species | 39320 | click here |
| leptospira interrogans | Yes | species | bacteria | bacteria | species | 173 | click here |
| mamastrovirus 3 | Yes | species | | | species | 1239567 | click here |
| myocastor coypus polyomavirus 1 | Yes | species | | | species | 2304056 | click here |
| neobalantidium coli | Yes | species | eukaryota | invertebrates | species | 71585 | click here |
| pneumocystis sp. | Yes | species | | | species | 1913146 | click here |
| pneumocystis sp. 3 pd-2016 | Yes | no rank | | | species | 1783538 | click here |
| rabies virus | Yes | species | viruses and viroids | viruses | species | 11292 | click here |
| rotavirus a | Yes | species | viruses and viroids | viruses | species | 28875 | click here |
| rotavirus b | Yes | species | viruses and viroids | viruses | species | 28876 | click here |
| rotavirus sp. | Yes | no rank | viruses and viroids | viruses | species | 10970 | click here |
| strongyloides myopotami | Yes | species | eukaryota | invertebrates | species | 553531 | click here |
| taenia martis | Yes | species | eukaryota | invertebrates | species | 159981 | click here |
| taenia polyacantha | Yes | species | eukaryota | invertebrates | species | 159984 | click here |
| toxoplasma gondii | Yes | species | eukaryota | invertebrates | species | 5811 | click here |
| trichinella spiralis | Yes | species | eukaryota | invertebrates | species | 6334 | click here |
| trichuris leporis | Yes | species | eukaryota | invertebrates | species | 109045 | click here |
| trichuris myocastoris | Yes | species | | | species | 1986355 | click here |
| trichuris sp. kr-2015 | Yes | no rank | | | species | 1611874 | click here |
| trichuris sylvilagi | Yes | species | | | species | | click here |
| vesicular stomatitis indiana virus | Yes | species | viruses and viroids | viruses | species | 11277 | click here |