| [clostridium] piliforme | Yes | species | bacteria | bacteria | species | 1524 | click here |
| angiostrongylus ondatrae | Yes | species | | | species | | click here |
| ascaris lumbricoides | Yes | species | eukaryota | invertebrates | species | 6252 | click here |
| bacillus aerius | Yes | species | bacteria | bacteria | species | 293388 | click here |
| capillaria hepatica | Yes | species | | | species | 1239592 | click here |
| chlamydia psittaci m56 | Yes | no rank | | | no rank | 1218357 | click here |
| cryptosporidium parvum | Yes | species | eukaryota | invertebrates | species | 5807 | click here |
| cryptosporidium sp. | Yes | species | eukaryota | invertebrates | species | 90962 | click here |
| cryptosporidium sp. 3568 | Yes | no rank | eukaryota | invertebrates | species | 278846 | click here |
| cryptosporidium sp. 3726 | Yes | no rank | eukaryota | invertebrates | species | 278847 | click here |
| cryptosporidium sp. 5490 | Yes | no rank | eukaryota | invertebrates | species | 202483 | click here |
| cryptosporidium sp. 5538 | Yes | no rank | eukaryota | invertebrates | species | 278848 | click here |
| dracunculus insignis | Yes | species | eukaryota | invertebrates | species | 331418 | click here |
| echinococcus multilocularis | Yes | species | eukaryota | invertebrates | species | 6211 | click here |
| echinostoma revolutum | Yes | species | eukaryota | invertebrates | species | 48217 | click here |
| echinostoma trivolvis | Yes | species | eukaryota | invertebrates | species | 27849 | click here |
| enterocytozoon bieneusi | Yes | species | eukaryota | plants | species | 31281 | click here |
| environmental samples | Yes | | | environmental samples | no rank | 333811 | click here |
| environmental samples | Yes | | | environmental samples | no rank | 359183 | click here |
| environmental samples | Yes | | | | no rank | 1629145 | click here |
| francisella philomiragia | Yes | species | bacteria | bacteria | species | 28110 | click here |
| francisella tularensis | Yes | species | bacteria | bacteria | species | 263 | click here |
| giardia intestinalis | Yes | species | eukaryota | invertebrates | species | 5741 | click here |
| giardia microti | Yes | species | eukaryota | invertebrates | species | 61965 | click here |
| human herpesvirus 1 | Yes | species | viruses and viroids | viruses | species | 10298 | click here |
| hydatigera taeniaeformis | Yes | species | eukaryota | invertebrates | species | 6205 | click here |
| influenza a virus | Yes | species | viruses and viroids | viruses | species | 11320 | click here |
| influenza a virus (a/musk rat/buryatiya/1944/2000(h4n6)) | Yes | no rank | viruses and viroids | viruses | no rank | 538418 | click here |
| influenza a virus (a/muskrat/russia/63/2014(h2n2)) | Yes | no rank | | | no rank | 1638769 | click here |
| leptospira interrogans | Yes | species | bacteria | bacteria | species | 173 | click here |
| leptospira santarosai | Yes | species | bacteria | bacteria | species | 28183 | click here |
| macrocanthorhynchus hirundinaceus | Yes | species | | | species | | click here |
| omsk hemorrhagic fever virus | Yes | species | viruses and viroids | viruses | species | 12542 | click here |
| ondatra zibethicus cytomegalovirus 1 | Yes | species | viruses and viroids | viruses | species | 431629 | click here |
| opisthorchis felineus | Yes | species | eukaryota | invertebrates | species | 147828 | click here |
| paragonimus kellicotti | Yes | species | eukaryota | invertebrates | species | 100269 | click here |
| paragonimus westermani | Yes | species | eukaryota | invertebrates | species | 34504 | click here |
| puumala orthohantavirus | Yes | species | | | species | 1980486 | click here |
| quinqueserialis quinqueserialis | Yes | species | | | species | 1200265 | click here |
| rodentolepis evaginata | No | species | eukaryota | invertebrates | species | 911536 | click here |
| salmonella enterica | Yes | species | bacteria | bacteria | species | 28901 | click here |
| taenia crassiceps | Yes | species | eukaryota | invertebrates | species | 6207 | click here |
| taenia martis | Yes | species | eukaryota | invertebrates | species | 159981 | click here |
| taenia polyacantha | Yes | species | eukaryota | invertebrates | species | 159984 | click here |
| tahyna orthobunyavirus | Yes | species | | | species | 2560796 | click here |
| tahyna virus | Yes | no rank | viruses and viroids | viruses | no rank | 45270 | click here |
| tick-borne encephalitis virus | Yes | species | viruses and viroids | viruses | species | 11084 | click here |
| toxoplasma gondii | Yes | species | eukaryota | invertebrates | species | 5811 | click here |
| uncultured bacterium | Yes | no rank | bacteria | environmental samples | species | 77133 | click here |