| arostrilepis janickii | Yes | species | | | species | 1297891 | click here |
| arvicola terrestris cytomegalovirus 1 | Yes | species | viruses and viroids | viruses | species | 431620 | click here |
| bartonella grahamii | Yes | species | bacteria | bacteria | species | 33045 | click here |
| blastocystis sp. | Yes | species | eukaryota | plants | species | 46767 | click here |
| borreliella afzelii | Yes | species | bacteria | bacteria | species | 29518 | click here |
| capillaria hepatica | Yes | species | | | species | 1239592 | click here |
| cowpox virus | Yes | species | viruses and viroids | viruses | species | 10243 | click here |
| ctenophthalmus sp. f405 | Yes | no rank | | | species | 1658645 | click here |
| echinococcus multilocularis | Yes | species | eukaryota | invertebrates | species | 6211 | click here |
| echinococcus ortleppi | Yes | species | eukaryota | invertebrates | species | 446560 | click here |
| emmonsia crescens uamh 3008 | Yes | no rank | | | no rank | 1247875 | click here |
| francisella tularensis | Yes | species | bacteria | bacteria | species | 263 | click here |
| francisella tularensis subsp. holarctica | Yes | subspecies | bacteria | bacteria | subspecies | 119857 | click here |
| hydatigera sp. b al-2015 | Yes | no rank | | | species | 1710883 | click here |
| hydatigera taeniaeformis | Yes | species | eukaryota | invertebrates | species | 6205 | click here |
| lymphocytic choriomeningitis mammarenavirus | Yes | species | viruses and viroids | viruses | species | 11623 | click here |
| omsk hemorrhagic fever virus | Yes | species | viruses and viroids | viruses | species | 12542 | click here |
| puumala orthohantavirus | Yes | species | | | species | 1980486 | click here |
| rabies virus | Yes | species | viruses and viroids | viruses | species | 11292 | click here |
| rickettsia felis | Yes | species | bacteria | bacteria | species | 42862 | click here |
| rickettsia helvetica | Yes | species | bacteria | bacteria | species | 35789 | click here |
| taenia polyacantha | Yes | species | eukaryota | invertebrates | species | 159984 | click here |
| tick-borne encephalitis virus | Yes | species | viruses and viroids | viruses | species | 11084 | click here |
| toxoplasma gondii | Yes | species | eukaryota | invertebrates | species | 5811 | click here |
| trichuris arvicolae | Yes | species | eukaryota | invertebrates | species | 153940 | click here |
| tula orthohantavirus | Yes | species | | | species | 1980494 | click here |
| uncultured actinobacillus sp. | Yes | no rank | bacteria | environmental samples | species | 417616 | click here |
| uncultured anaplasma sp. | Yes | no rank | bacteria | environmental samples | species | 319051 | click here |
| uncultured bacterium | Yes | no rank | bacteria | environmental samples | species | 77133 | click here |
| uncultured bartonella sp. | Yes | no rank | bacteria | environmental samples | species | 104108 | click here |
| uncultured bordetella sp. | Yes | no rank | bacteria | environmental samples | species | 296836 | click here |
| uncultured borreliella sp. | Yes | no rank | bacteria | environmental samples | species | 302170 | click here |
| uncultured filobacterium sp. | Yes | species | | | species | 1740709 | click here |
| uncultured helicobacter sp. | Yes | no rank | bacteria | environmental samples | species | 175537 | click here |
| uncultured leptospira sp. | Yes | no rank | bacteria | environmental samples | species | 253437 | click here |
| uncultured mycobacterium sp. | Yes | no rank | bacteria | environmental samples | species | 171292 | click here |
| uncultured mycoplasma sp. | Yes | no rank | bacteria | environmental samples | species | 167967 | click here |
| uncultured orientia sp. | Yes | no rank | bacteria | environmental samples | species | 543121 | click here |
| uncultured pasteurellaceae bacterium | Yes | no rank | bacteria | environmental samples | species | 300311 | click here |
| uncultured rickettsia sp. | Yes | no rank | bacteria | environmental samples | species | 249168 | click here |
| uncultured ureaplasma sp. | Yes | no rank | bacteria | environmental samples | species | 293430 | click here |
| uncultured yersinia sp. | Yes | no rank | bacteria | environmental samples | species | 454005 | click here |
| versteria mustelae | Yes | species | | invertebrates | species | 1434714 | click here |
| yersinia massiliensis | Yes | species | bacteria | bacteria | species | 419257 | click here |