| [clostridium] piliforme | No | species | bacteria | bacteria | species | 1524 | click here |
| [pasteurella] aerogenes | No | species | bacteria | bacteria | species | 749 | click here |
| [pasteurella] pneumotropica | No | species | bacteria | bacteria | species | 758 | click here |
| acinetobacter johnsonii | No | species | bacteria | bacteria | species | 40214 | click here |
| acinetobacter pittii | No | no rank | bacteria | bacteria | species | 48296 | click here |
| acinetobacter radioresistens | No | species | bacteria | bacteria | species | 40216 | click here |
| actinobacillus capsulatus | No | species | bacteria | bacteria | species | 717 | click here |
| aedes aegypti | No | species | eukaryota | invertebrates | species | 7159 | click here |
| aedes vexans | No | species | eukaryota | invertebrates | species | 7163 | click here |
| aeromonas hydrophila | No | species | bacteria | bacteria | species | 644 | click here |
| aichivirus a | No | species | viruses and viroids | viruses | species | 72149 | click here |
| alistipes sp. enrichment culture clone | No | no rank | | | species | 1648956 | click here |
| alphacoronavirus l232 | No | species | | | species | 2520501 | click here |
| alphacoronavirus sp. | No | species | | | species | 1906673 | click here |
| anaplasma phagocytophilum | No | species | bacteria | bacteria | species | 948 | click here |
| andrya cuniculi | No | species | eukaryota | invertebrates | species | 140450 | click here |
| anopheles atroparvus | No | species | eukaryota | invertebrates | species | 41427 | click here |
| anopheles maculipennis | No | species | eukaryota | invertebrates | species | 41429 | click here |
| anopheles messeae | No | species | eukaryota | invertebrates | species | 41430 | click here |
| arthroderma benhamiae | No | species | eukaryota | plants | species | 63400 | click here |
| arthroderma cuniculi | No | species | eukaryota | plants | species | 74036 | click here |
| arthroderma otae | No | species | eukaryota | plants | species | 63405 | click here |
| arthroderma vanbreuseghemii | No | species | eukaryota | plants | species | 63407 | click here |
| arthrographis kalrae | No | species | eukaryota | plants | species | 241728 | click here |
| ascaris lumbricoides | No | species | eukaryota | invertebrates | species | 6252 | click here |
| ascaris suum | No | species | eukaryota | invertebrates | species | 6253 | click here |
| ascodesmis sphaerospora | No | species | eukaryota | plants | species | 47183 | click here |
| aspergillus fumigatus | No | species | eukaryota | plants | species | 746128 | click here |
| avian hepatitis e virus | No | no rank | viruses and viroids | viruses | no rank | 172851 | click here |
| babesia divergens | No | species | eukaryota | invertebrates | species | 32595 | click here |
| bacillus amyloliquefaciens | No | species | bacteria | bacteria | species | 1390 | click here |
| bacillus cereus | No | species | bacteria | bacteria | species | 1396 | click here |
| bacillus licheniformis | No | species | bacteria | bacteria | species | 1402 | click here |
| bacillus pumilus | No | species | bacteria | bacteria | species | 1408 | click here |
| bacillus sp. rab-xz-15 | No | no rank | bacteria | bacteria | species | 764843 | click here |
| bacillus sp. rb-zd-1 | No | no rank | bacteria | bacteria | species | 863583 | click here |
| bacillus sp. t-4-3 | No | no rank | | | species | 1463939 | click here |
| bacillus subtilis | No | species | bacteria | bacteria | species | 1423 | click here |
| bacteroides fragilis | No | species | bacteria | bacteria | species | 817 | click here |
| bartonella alsatica | No | species | bacteria | bacteria | species | 52764 | click here |
| bartonella henselae | Yes | species | bacteria | bacteria | species | 38323 | click here |
| baylisascaris procyonis | No | species | eukaryota | invertebrates | species | 6259 | click here |
| beauveria sp. rsl-iii | No | no rank | eukaryota | plants | species | 699190 | click here |
| betacoronavirus 1 | No | species | viruses and viroids | viruses | species | 694003 | click here |
| betacoronavirus sp. | No | species | | | species | 1928434 | click here |
| bifidobacterium animalis subsp. lactis | No | subspecies | bacteria | bacteria | subspecies | 302911 | click here |
| bifidobacterium animalis subsp. lactis atcc 27674 | No | no rank | | | no rank | 1365954 | click here |
| bifidobacterium cuniculi | No | species | bacteria | bacteria | species | 1688 | click here |
| bifidobacterium italicum | No | species | | | species | 1960968 | click here |
| bifidobacterium magnum | No | species | bacteria | bacteria | species | 1692 | click here |
| bifidobacterium magnum dsm 20222 | No | no rank | | | no rank | 1121108 | click here |
| bifidobacterium saeculare dsm 6531 = lmg 14934 | No | no rank | | | no rank | 1437611 | click here |
| blastocystis sp. | No | species | eukaryota | plants | species | 46767 | click here |
| bordetella bronchiseptica | No | species | bacteria | bacteria | species | 518 | click here |
| bordetella bronchiseptica 3e44 | No | no rank | | | no rank | 1331200 | click here |
| bordetella bronchiseptica b20-10725633 | No | no rank | | | no rank | 1458263 | click here |
| bordetella bronchiseptica rb630 | No | no rank | | | no rank | 1331243 | click here |
| bordetella hinzii 5132 | No | no rank | | | no rank | 1331257 | click here |
| bordetella sp. scyabb-1 | No | no rank | bacteria | bacteria | species | 593400 | click here |
| borna disease virus | No | species | viruses and viroids | viruses | species | 12455 | click here |
| borreliella burgdorferi | No | species | bacteria | bacteria | species | 139 | click here |
| borreliella garinii | No | species | bacteria | bacteria | species | 29519 | click here |
| bovine immunodeficiency virus | No | species | viruses and viroids | viruses | species | 11657 | click here |
| bovine viral diarrhea virus 1 | No | species | viruses and viroids | viruses | species | 11099 | click here |
| brucella suis | No | species | bacteria | bacteria | species | 29461 | click here |
| byssochlamys spectabilis | No | species | eukaryota | plants | species | 264951 | click here |
| campylobacter cuniculorum | No | species | bacteria | bacteria | species | 374106 | click here |
| campylobacter cuniculorum dsm 23162 | No | no rank | | | no rank | 1121267 | click here |
| campylobacter jejuni | No | species | bacteria | bacteria | species | 197 | click here |
| canine distemper virus | No | species | viruses and viroids | viruses | species | 11232 | click here |
| chaetomidium trichorobustum | No | species | eukaryota | plants | species | 669025 | click here |
| chaetomium trigonosporum | No | species | eukaryota | plants | species | 706413 | click here |
| chlamydia psittaci | No | species | bacteria | bacteria | species | 83554 | click here |
| chlamydia psittaci c6/98 | No | no rank | | | no rank | 1112249 | click here |
| chrysosporium parvum | No | species | eukaryota | plants | species | 41283 | click here |
| cilia-associated respiratory bacterium b6 | No | no rank | bacteria | bacteria | species | 146753 | click here |
| circinella muscae | No | species | | | species | 1171613 | click here |
| circinella umbellata | No | species | eukaryota | plants | species | 101103 | click here |
| citrobacter freundii | No | species | bacteria | bacteria | species | 546 | click here |
| classical swine fever virus | No | species | viruses and viroids | viruses | species | 11096 | click here |
| clonorchis sinensis | No | species | eukaryota | invertebrates | species | 79923 | click here |
| clostridioides difficile | No | species | bacteria | bacteria | species | 1496 | click here |
| clostridium autoethanogenum | No | species | bacteria | bacteria | species | 84023 | click here |
| clostridium autoethanogenum dsm 10061 | No | no rank | | | no rank | 1341692 | click here |
| clostridium perfringens | No | species | bacteria | bacteria | species | 1502 | click here |
| clostridium sp. auh-jlr23 | No | no rank | | | species | 1505062 | click here |
| cocksfoot mottle virus | No | species | viruses and viroids | viruses | species | 40979 | click here |
| cooperia punctata | No | species | eukaryota | invertebrates | species | 96640 | click here |
| coronavirus rabbit_cov/la06_256/ory_cun/esp/2006 | No | species | | | species | 1679924 | click here |
| coronavirus rabbit_cov/la09_24/ory_cun/esp/2009 | No | species | | | species | 1679925 | click here |
| coronavirus rabbit_cov/la09_31/ory_cun/esp/2009 | No | species | | | species | 1679926 | click here |
| coronavirus rabbit_cov/la09_32/ory_cun/esp/2009 | No | species | | | species | 1679927 | click here |
| coronavirus rabbit_cov/la09_48/ory_cun/esp/2009 | No | species | | | species | 1679928 | click here |
| cryptosporidium andersoni | No | species | eukaryota | invertebrates | species | 117008 | click here |
| cryptosporidium canis | No | species | eukaryota | invertebrates | species | 195482 | click here |
| cryptosporidium cuniculus | No | species | eukaryota | invertebrates | species | 564424 | click here |
| cryptosporidium fayeri | No | species | eukaryota | invertebrates | species | 582425 | click here |
| cryptosporidium hominis | No | species | eukaryota | invertebrates | species | 237895 | click here |
| cryptosporidium parvum | No | species | eukaryota | invertebrates | species | 5807 | click here |
| cryptosporidium sp. b1-36 | No | no rank | eukaryota | invertebrates | species | 229488 | click here |