| akabane virus | Yes | species | viruses and viroids | viruses | species | 70566 | click here |
| alcelaphine herpesvirus 1 | Yes | species | viruses and viroids | viruses | species | 35252 | click here |
| alcelaphine herpesvirus 2 | Yes | species | viruses and viroids | viruses | species | 138184 | click here |
| anopheles gambiae | Yes | species | eukaryota | invertebrates | species | 7165 | click here |
| avitellina centripunctata | Yes | species | | | species | 1141744 | click here |
| blastocystis sp. | Yes | species | eukaryota | plants | species | 46767 | click here |
| bluetongue virus | Yes | species | viruses and viroids | viruses | species | 40051 | click here |
| bovidae gammaherpesvirus 4 | Yes | species | | | species | 2716971 | click here |
| bovine ephemeral fever virus | Yes | species | viruses and viroids | viruses | species | 11303 | click here |
| bovine herpesvirus 1 | Yes | species | viruses and viroids | viruses | species | 10320 | click here |
| bovine herpesvirus 2 | Yes | species | viruses and viroids | viruses | species | 10295 | click here |
| bovine viral diarrhea virus 1 | Yes | species | viruses and viroids | viruses | species | 11099 | click here |
| brucella abortus | Yes | species | bacteria | bacteria | species | 235 | click here |
| crimean-congo hemorrhagic fever orthonairovirus | Yes | species | | | species | 1980519 | click here |
| damaliscus korrigum gammaherpesvirus 1 | Yes | species | | | species | 2716977 | click here |
| echinococcus granulosus | Yes | species | eukaryota | invertebrates | species | 6210 | click here |
| ehrlichia ruminantium | Yes | species | bacteria | bacteria | species | 779 | click here |
| escherichia coli | Yes | species | bacteria | bacteria | species | 562 | click here |
| escherichia coli o8 | Yes | no rank | | | no rank | 1010796 | click here |
| foot-and-mouth disease virus | Yes | species | viruses and viroids | viruses | species | 12110 | click here |
| haemonchus bedfordi | Yes | species | | | species | 1701398 | click here |
| haemonchus contortus | Yes | species | eukaryota | invertebrates | species | 6289 | click here |
| longistrongylus albifrontis | Yes | species | | | species | | click here |
| lumpy skin disease virus | Yes | species | viruses and viroids | viruses | species | 59509 | click here |
| moniezia expansa | Yes | species | eukaryota | invertebrates | species | 28841 | click here |
| mycobacterium bovis | Yes | species | bacteria | bacteria | species | 1765 | click here |
| nematodirus spathiger | Yes | species | eukaryota | invertebrates | species | 61841 | click here |
| oestrus ovis | Yes | species | eukaryota | invertebrates | species | 123737 | click here |
| salmonella enterica subsp. enterica serovar typhimurium | Yes | no rank | bacteria | bacteria | no rank | 90371 | click here |
| schistosoma bovis | Yes | species | eukaryota | invertebrates | species | 6184 | click here |
| sindbis virus | Yes | species | viruses and viroids | viruses | species | 11034 | click here |
| theileria sp. ex damaliscus lunatus | Yes | no rank | eukaryota | invertebrates | species | 889314 | click here |
| trichostrongylus axei | Yes | species | eukaryota | invertebrates | species | 40349 | click here |
| uncultured neocallimastigales | Yes | no rank | eukaryota | environmental samples | species | 325898 | click here |
| yersinia pseudotuberculosis | Yes | species | bacteria | bacteria | species | 633 | click here |