| actinomyces sp. a1(2015) | No | no rank | | | species | 1769425 | click here |
| actinomyces sp. c10 | No | no rank | | | species | 1769418 | click here |
| actinomyces sp. js11 | No | no rank | | | species | 1769419 | click here |
| actinomyces sp. js16 | No | no rank | | | species | 1769420 | click here |
| akabane virus | No | species | viruses and viroids | viruses | species | 70566 | click here |
| alcelaphine herpesvirus 1 | No | species | viruses and viroids | viruses | species | 35252 | click here |
| alcelaphine herpesvirus 1 | Yes | species | viruses and viroids | viruses | species | 35252 | click here |
| alcelaphine herpesvirus 2 | No | species | viruses and viroids | viruses | species | 138184 | click here |
| alcelaphine herpesvirus 2 | Yes | species | viruses and viroids | viruses | species | 138184 | click here |
| anaplasma bovis | No | species | bacteria | bacteria | species | 186733 | click here |
| anaplasma centrale | No | species | bacteria | bacteria | species | 769 | click here |
| anaplasma centrale | Yes | species | bacteria | bacteria | species | 769 | click here |
| anaplasma marginale | No | species | bacteria | bacteria | species | 770 | click here |
| anaplasma marginale | Yes | species | bacteria | bacteria | species | 770 | click here |
| anaplasma ovis | No | species | bacteria | bacteria | species | 142058 | click here |
| anaplasma ovis | Yes | species | bacteria | bacteria | species | 142058 | click here |
| anaplasma phagocytophilum | No | species | bacteria | bacteria | species | 948 | click here |
| anaplasma phagocytophilum | Yes | species | bacteria | bacteria | species | 948 | click here |
| anaplasma platys | No | species | bacteria | bacteria | species | 949 | click here |
| anaplasma sp. 1-ap-2016 | No | no rank | | | species | 1811197 | click here |
| anaplasma sp. hlj-14 | No | no rank | | | species | 1562740 | click here |
| anaplasma sp. reddeer1/1 | No | no rank | | | species | 1387254 | click here |
| anaplasma sp. reddeer1/2 | No | no rank | | | species | 1387255 | click here |
| ashworthius sidemi | No | species | eukaryota | invertebrates | species | 126389 | click here |
| babesia bigemina | No | species | eukaryota | invertebrates | species | 5866 | click here |
| babesia capreoli | No | species | eukaryota | invertebrates | species | 308426 | click here |
| babesia cf. divergens | No | subspecies | eukaryota | invertebrates | species | 740948 | click here |
| babesia cf. odocoilei | No | no rank | | | species | 1078082 | click here |
| babesia divergens | No | species | eukaryota | invertebrates | species | 32595 | click here |
| babesia divergens | Yes | species | eukaryota | invertebrates | species | 32595 | click here |
| babesia odocoilei | No | species | eukaryota | invertebrates | species | 36766 | click here |
| babesia odocoilei | Yes | species | eukaryota | invertebrates | species | 36766 | click here |
| babesia sp. 1 mj-2013 | No | no rank | | | species | 1401113 | click here |
| babesia sp. 968-9 | No | no rank | eukaryota | invertebrates | species | 940461 | click here |
| babesia sp. red deer/g1/irl | No | no rank | eukaryota | invertebrates | species | 740949 | click here |
| bacillus anthracis | No | species | bacteria | bacteria | species | 1392 | click here |
| bartonella bovis | No | species | bacteria | bacteria | species | 155194 | click here |
| bartonella capreoli | No | species | bacteria | bacteria | species | 155192 | click here |
| bartonella schoenbuchensis | No | species | bacteria | bacteria | species | 165694 | click here |
| bartonella sp. | No | species | bacteria | bacteria | species | 46358 | click here |
| bartonella sp. 'elk-1' | No | no rank | bacteria | bacteria | species | 122269 | click here |
| bartonella sp. 'elk-2' | No | no rank | bacteria | bacteria | species | 122270 | click here |
| bartonella sp. 'elk-3' | No | no rank | bacteria | bacteria | species | 122271 | click here |
| batai virus | No | no rank | viruses and viroids | viruses | no rank | 80942 | click here |
| besnoitia besnoiti | No | species | eukaryota | invertebrates | species | 94643 | click here |
| besnoitia tarandi | No | species | eukaryota | invertebrates | species | 279368 | click here |
| bhanja virus | No | species | | | species | 1213620 | click here |
| bicaulus sagittatus | No | species | | | species | | click here |
| blastocystis sp. subtype 1 | No | no rank | eukaryota | plants | species | 944036 | click here |
| blastocystis sp. subtype 10 | No | no rank | eukaryota | plants | species | 944207 | click here |
| bluetongue virus | No | species | viruses and viroids | viruses | species | 40051 | click here |
| bluetongue virus | Yes | species | viruses and viroids | viruses | species | 40051 | click here |
| bluetongue virus 1 | No | no rank | viruses and viroids | viruses | no rank | 35327 | click here |
| bluetongue virus 21 | No | no rank | viruses and viroids | viruses | no rank | 45030 | click here |
| border disease virus | No | species | viruses and viroids | viruses | species | 358764 | click here |
| borreliella afzelii | No | species | bacteria | bacteria | species | 29518 | click here |
| borreliella burgdorferi | No | species | bacteria | bacteria | species | 139 | click here |
| bovine ephemeral fever virus | No | species | viruses and viroids | viruses | species | 11303 | click here |
| bovine foamy virus | No | species | viruses and viroids | viruses | species | 207343 | click here |
| bovine hepacivirus | No | species | viruses and viroids | viruses | species | 1633878 | click here |
| bovine herpesvirus 1 | No | species | viruses and viroids | viruses | species | 10320 | click here |
| bovine herpesvirus 1 | Yes | species | viruses and viroids | viruses | species | 10320 | click here |
| bovine herpesvirus 2 | No | species | viruses and viroids | viruses | species | 10295 | click here |
| bovine herpesvirus 4 | No | species | viruses and viroids | viruses | species | 10385 | click here |
| bovine herpesvirus 6 | No | species | | viruses | species | 1504288 | click here |
| bovine papillomavirus | No | species | viruses and viroids | viruses | species | 10571 | click here |
| bovine papillomavirus | Yes | species | viruses and viroids | viruses | species | 10571 | click here |
| bovine papillomavirus 7z | No | species | | | species | 1765003 | click here |
| bovine papillomavirus type 1 | No | no rank | viruses and viroids | viruses | no rank | 10559 | click here |
| bovine papillomavirus type 1 | Yes | no rank | viruses and viroids | viruses | no rank | 10559 | click here |
| bovine papillomavirus type 2 | No | no rank | viruses and viroids | viruses | no rank | 10560 | click here |
| bovine respiratory syncytial virus | No | species | viruses and viroids | viruses | species | 11246 | click here |
| bovine spongiform encephalopathy agent | No | species | | | species | | click here |
| bovine spongiform encephalopathy agent | Yes | species | | | species | | click here |
| bovine viral diarrhea virus 1 | No | species | viruses and viroids | viruses | species | 11099 | click here |
| bovine viral diarrhea virus 1 | Yes | species | viruses and viroids | viruses | species | 11099 | click here |
| brucella abortus | No | species | bacteria | bacteria | species | 235 | click here |
| brucella abortus | Yes | species | bacteria | bacteria | species | 235 | click here |
| brucella abortus b10-0091 | No | no rank | | | no rank | 1328359 | click here |
| brucella ovis | No | species | bacteria | bacteria | species | 236 | click here |
| bunostomum trigonocephalum | No | species | eukaryota | invertebrates | species | 66065 | click here |
| bunyamwera orthobunyavirus | No | species | | | species | 1933179 | click here |
| bunyamwera virus | No | species | viruses and viroids | viruses | species | 35304 | click here |
| bunyamwera virus | Yes | species | viruses and viroids | viruses | species | 35304 | click here |
| california encephalitis orthobunyavirus | No | species | | | species | 1933264 | click here |
| california encephalitis virus | No | no rank | viruses and viroids | viruses | no rank | 35305 | click here |
| california encephalitis virus | Yes | no rank | viruses and viroids | viruses | no rank | 35305 | click here |
| calovo virus | No | species | viruses and viroids | viruses | species | 365047 | click here |
| campylobacter hyointestinalis subsp. hyointestinalis | No | subspecies | bacteria | bacteria | subspecies | 91352 | click here |
| caprine arthritis encephalitis virus | No | species | viruses and viroids | viruses | species | 11660 | click here |
| caprine herpesvirus 1 | No | species | viruses and viroids | viruses | species | 39944 | click here |
| caprine herpesvirus 2 | No | species | viruses and viroids | viruses | species | 135102 | click here |
| cephenemyia apicata | Yes | species | | | species | | click here |
| cephenemyia auribarbis | No | species | | | species | 1888233 | click here |
| cephenemyia jellisoni | Yes | species | | | species | 1640936 | click here |
| cephenemyia pratti | Yes | species | | | species | | click here |
| cervid herpesvirus 1 | No | species | viruses and viroids | viruses | species | 79891 | click here |
| cervid herpesvirus 1 | Yes | species | viruses and viroids | viruses | species | 79891 | click here |
| cervid herpesvirus 2 | No | species | viruses and viroids | viruses | species | 365327 | click here |
| cervine adenovirus | No | species | viruses and viroids | viruses | species | 346174 | click here |