| aedes vexans | No | species | eukaryota | invertebrates | species | 7163 | click here |
| afipia sp. | No | species | | | species | 1871052 | click here |
| akkermansia sp. | No | species | | | species | 1872421 | click here |
| alcelaphine herpesvirus 1 | No | species | viruses and viroids | viruses | species | 35252 | click here |
| alistipes sp. | No | species | | | species | 1872444 | click here |
| alphaproteobacteria bacterium | No | no rank | | | species | 1913988 | click here |
| anaplasma ovis | No | species | bacteria | bacteria | species | 142058 | click here |
| anaplasma phagocytophilum | No | species | bacteria | bacteria | species | 948 | click here |
| anaplasma sp. | Yes | species | bacteria | bacteria | species | 1872535 | click here |
| anaplasma sp. hlj-14 | No | no rank | | | species | 1562740 | click here |
| arsenophonus endosymbiont of lipoptena cervi | No | no rank | bacteria | bacteria | species | 363258 | click here |
| ashworthius sidemi | No | species | eukaryota | invertebrates | species | 126389 | click here |
| astrovirus deer/ccastv-1/dnk/2010 | No | no rank | viruses and viroids | viruses | species | 909307 | click here |
| astrovirus deer/ccastv-2/dnk/2010 | No | no rank | viruses and viroids | viruses | species | 909308 | click here |
| babesia annae | No | species | eukaryota | invertebrates | species | 1811913 | click here |
| babesia bigemina | No | species | eukaryota | invertebrates | species | 5866 | click here |
| babesia bovis | No | species | eukaryota | invertebrates | species | 5865 | click here |
| babesia capreoli | No | species | eukaryota | invertebrates | species | 308426 | click here |
| babesia divergens | No | species | eukaryota | invertebrates | species | 32595 | click here |
| babesia odocoilei | No | species | eukaryota | invertebrates | species | 36766 | click here |
| babesia sp. | No | species | eukaryota | invertebrates | species | 35084 | click here |
| babesia sp. d1 aam-2008 | No | no rank | eukaryota | invertebrates | species | 491034 | click here |
| babesia sp. d2 aam-2008 | No | no rank | eukaryota | invertebrates | species | 491035 | click here |
| babesia sp. d3 aam-2008 | No | no rank | eukaryota | invertebrates | species | 491036 | click here |
| babesia sp. 'venatorum' | No | no rank | eukaryota | invertebrates | species | 171411 | click here |
| babesia sp. zs-t04 | No | no rank | eukaryota | invertebrates | species | 386616 | click here |
| bacillales bacterium | No | species | | | species | 1904864 | click here |
| bacilli bacterium | No | species | | | species | 1903720 | click here |
| bacterium | No | no rank | | | species | 1869227 | click here |
| bacteroidales bacterium | No | species | | | species | 2030927 | click here |
| bacteroides sp. | No | no rank | bacteria | bacteria | species | 29523 | click here |
| bartonella bovis | No | species | bacteria | bacteria | species | 155194 | click here |
| bartonella capreoli | No | species | bacteria | bacteria | species | 155192 | click here |
| bartonella schoenbuchensis | No | species | bacteria | bacteria | species | 165694 | click here |
| bartonella sp. | No | species | bacteria | bacteria | species | 46358 | click here |
| bartonella sp. ibs 206 | No | no rank | bacteria | bacteria | species | 155193 | click here |
| batai virus | No | no rank | viruses and viroids | viruses | no rank | 80942 | click here |
| besnoitia besnoiti | No | species | eukaryota | invertebrates | species | 94643 | click here |
| bhanja virus | No | species | | | species | 1213620 | click here |
| bibersteinia trehalosi | No | species | bacteria | bacteria | species | 47735 | click here |
| bifidobacterium pseudolongum subsp. globosum | No | subspecies | bacteria | bacteria | subspecies | 1690 | click here |
| blautia sp. | No | species | | | species | 1955243 | click here |
| bluetongue virus | No | species | viruses and viroids | viruses | species | 40051 | click here |
| border disease virus | No | species | viruses and viroids | viruses | species | 358764 | click here |
| borreliella burgdorferi | No | species | bacteria | bacteria | species | 139 | click here |
| borreliella garinii | No | species | bacteria | bacteria | species | 29519 | click here |
| bovine herpesvirus 1 | No | species | viruses and viroids | viruses | species | 10320 | click here |
| bovine herpesvirus 2 | No | species | viruses and viroids | viruses | species | 10295 | click here |
| bovine herpesvirus 4 | No | species | viruses and viroids | viruses | species | 10385 | click here |
| bovine kobuvirus | No | species | | | species | 1476554 | click here |
| bovine papillomavirus type 2 | No | no rank | viruses and viroids | viruses | no rank | 10560 | click here |
| bovine respiratory syncytial virus | No | species | viruses and viroids | viruses | species | 11246 | click here |
| bovine viral diarrhea virus 1 | No | species | viruses and viroids | viruses | species | 11099 | click here |
| bovine viral diarrhea virus-1 isolate sh9 | No | no rank | viruses and viroids | viruses | no rank | 99476 | click here |
| brucella suis | No | species | bacteria | bacteria | species | 29461 | click here |
| bunostomum trigonocephalum | No | species | eukaryota | invertebrates | species | 66065 | click here |
| bunyamwera orthobunyavirus | No | species | | | species | 1933179 | click here |
| bunyamwera virus | No | species | viruses and viroids | viruses | species | 35304 | click here |
| burkholderiaceae bacterium | No | species | | | species | 2030806 | click here |
| butyrivibrio sp. | No | no rank | bacteria | bacteria | species | 28121 | click here |
| california encephalitis orthobunyavirus | No | species | | | species | 1933264 | click here |
| california encephalitis virus | No | no rank | viruses and viroids | viruses | no rank | 35305 | click here |
| calovo virus | No | species | viruses and viroids | viruses | species | 365047 | click here |
| campylobacter sp. | No | no rank | bacteria | bacteria | species | 205 | click here |
| candidatus saccharibacteria bacterium | No | species | | | species | 2026720 | click here |
| capreolus capreolus papillomavirus 1 | No | species | viruses and viroids | viruses | species | 470214 | click here |
| capreolus herpesvirus 1 | No | species | | | species | 1273575 | click here |
| caprine arthritis encephalitis virus | No | species | viruses and viroids | viruses | species | 11660 | click here |
| caprine herpesvirus 1 | No | species | viruses and viroids | viruses | species | 39944 | click here |
| caprine herpesvirus 2 | No | species | viruses and viroids | viruses | species | 135102 | click here |
| caprine kobuvirus | No | species | | | species | 1452516 | click here |
| cephenemyia stimulator | No | species | eukaryota | invertebrates | species | 170895 | click here |
| cercopithifilaria rugosicauda | No | species | | | species | 1427170 | click here |
| cervid herpesvirus 1 | No | species | viruses and viroids | viruses | species | 79891 | click here |
| cervid herpesvirus 2 | No | species | viruses and viroids | viruses | species | 365327 | click here |
| chabertia ovina | No | species | eukaryota | invertebrates | species | 63233 | click here |
| chlamydia abortus | No | species | bacteria | bacteria | species | 83555 | click here |
| chlamydia sp. | No | no rank | bacteria | bacteria | species | 35827 | click here |
| chronic wasting disease | No | species | | | | | click here |
| clostridia bacterium | No | species | | | species | 2044939 | click here |
| clostridiales bacterium | No | species | | | species | 1898207 | click here |
| clostridium perfringens | No | species | bacteria | bacteria | species | 1502 | click here |
| clostridium sp. | No | no rank | bacteria | bacteria | species | 1506 | click here |
| cooperia oncophora | No | species | eukaryota | invertebrates | species | 27828 | click here |
| cooperia pectinata | No | species | eukaryota | invertebrates | species | 420891 | click here |
| cooperia punctata | No | species | eukaryota | invertebrates | species | 96640 | click here |
| coxiella burnetii | No | species | bacteria | bacteria | species | 777 | click here |
| coxiella endosymbiont of lipoptena fortisetosa | No | species | | | species | 1815967 | click here |
| cryptosporidium bovis | No | species | eukaryota | invertebrates | species | 310047 | click here |
| cryptosporidium canis | No | species | eukaryota | invertebrates | species | 195482 | click here |
| cryptosporidium ryanae | No | species | eukaryota | invertebrates | species | 515981 | click here |
| cryptosporidium ubiquitum | No | species | eukaryota | invertebrates | species | 857276 | click here |
| culex pipiens | No | species | eukaryota | invertebrates | species | 7175 | click here |
| culex pipiens pipiens | No | subspecies | eukaryota | invertebrates | subspecies | 38569 | click here |
| dicrocoelium dendriticum | No | species | eukaryota | invertebrates | species | 57078 | click here |
| dictyocaulus capreolus | No | species | eukaryota | invertebrates | species | 216872 | click here |
| dictyocaulus eckerti | No | species | eukaryota | invertebrates | species | 44604 | click here |
| dictyocaulus noerneri | No | species | eukaryota | invertebrates | species | 126390 | click here |
| dictyocaulus sp. | No | species | eukaryota | invertebrates | species | 89064 | click here |
| dictyocaulus sp. 1 san-2009 | No | no rank | eukaryota | invertebrates | species | 668803 | click here |