| acanthocheilonema odendhali | Yes | species | nematodes | invertebrates | species | 1346854 | click here |
| adenocephalus pacificus | Yes | species | eukaryota | invertebrates | species | 372152 | click here |
| aeromonas dhakensis | Yes | species | bacteria | bacteria | species | 196024 | click here |
| anelloviridae sp. | Yes | species | | | species | 2055263 | click here |
| anellovirus fur seal/aaust58/br/2012 | Yes | no rank | | | species | 1659791 | click here |
| anellovirus fur seal/aaust59/br/2012 | Yes | no rank | | | species | 1659792 | click here |
| anellovirus fur seal/aaust60/br/2012 | Yes | no rank | | | species | 1659793 | click here |
| anellovirus fur seal/aaust62/br/2012 | Yes | no rank | | | species | 1676473 | click here |
| anellovirus fur seal/atrop52/br/2012 | Yes | no rank | | | species | 1659794 | click here |
| anellovirus fur seal/atrop72/br/2012 | Yes | no rank | | | species | 1676474 | click here |
| anisakis pegreffii | Yes | species | eukaryota | invertebrates | species | 303229 | click here |
| anisakis physeteris | Yes | species | eukaryota | invertebrates | species | 290545 | click here |
| anisakis simplex | Yes | species | eukaryota | invertebrates | species | 6269 | click here |
| anisakis simplex c nascetti et al., 1986 | Yes | no rank | eukaryota | invertebrates | species | 645698 | click here |
| anisakis sp. san-2004 | Yes | no rank | eukaryota | invertebrates | species | 306023 | click here |
| arcanobacterium phocae | Yes | species | bacteria | bacteria | species | 131112 | click here |
| ascocotyle longa | Yes | species | | invertebrates | species | 1343080 | click here |
| avian orthoreovirus | Yes | species | viruses and viroids | viruses | species | 38170 | click here |
| blastocystis hominis | Yes | species | eukaryota | plants | species | 12968 | click here |
| blastomyces dermatitidis | Yes | species | eukaryota | plants | species | 5039 | click here |
| bolbosoma nipponicum | Yes | species | | invertebrates | species | 1167864 | click here |
| bolbosoma sp. mgv-2012 | Yes | no rank | | | species | 1227250 | click here |
| bovine calicivirus | Yes | no rank | viruses and viroids | viruses | no rank | 37300 | click here |
| brucella abortus | Yes | species | bacteria | bacteria | species | 235 | click here |
| brucella canis | Yes | species | bacteria | bacteria | species | 36855 | click here |
| brucella ceti | Yes | species | bacteria | bacteria | species | 120577 | click here |
| brucella pinnipedialis | Yes | species | bacteria | bacteria | species | 120576 | click here |
| california sea lion adeno-associated virus 1 | Yes | | | | no rank | 1073950 | click here |
| california sea lion adenovirus | Yes | species | | | species | 2259112 | click here |
| california sea lion adenovirus 1 | No | species | viruses and viroids | viruses | species | 943083 | click here |
| california sea lion adenovirus 1 | Yes | species | viruses and viroids | viruses | species | 943083 | click here |
| california sea lion anellovirus | Yes | no rank | viruses and viroids | viruses | no rank | 602021 | click here |
| california sea lion astrovirus 1 | Yes | species | viruses and viroids | viruses | species | 645426 | click here |
| california sea lion astrovirus 10 | Yes | species | | | species | 1073951 | click here |
| california sea lion astrovirus 11 | Yes | species | | | species | 1073952 | click here |
| california sea lion astrovirus 2 | Yes | species | viruses and viroids | viruses | species | 645427 | click here |
| california sea lion astrovirus 3 | Yes | species | viruses and viroids | viruses | species | 645428 | click here |
| california sea lion astrovirus 4 | Yes | species | | | species | 1073953 | click here |
| california sea lion astrovirus 5 | Yes | species | | | species | 1073954 | click here |
| california sea lion astrovirus 6 | Yes | species | | | species | 1073955 | click here |
| california sea lion astrovirus 7 | Yes | species | | | species | 1073956 | click here |
| california sea lion astrovirus 8 | Yes | species | | | species | 1073957 | click here |
| california sea lion astrovirus 9 | Yes | species | | | species | 1073958 | click here |
| california sea lion bocavirus 1 | Yes | species | | | species | 1073959 | click here |
| california sea lion bocavirus 3 | Yes | species | | | species | 1073961 | click here |
| california sea lion bocavirus 4 | Yes | species | | | species | 1073962 | click here |
| california sea lion herpesvirus | Yes | species | viruses and viroids | viruses | species | 107236 | click here |
| california sea lion norovirus | Yes | species | | | species | 2070151 | click here |
| california sea lion norovirus 1 | Yes | no rank | | | no rank | 1073964 | click here |
| california sea lion polyomavirus 1 | Yes | species | viruses and viroids | viruses | species | 715223 | click here |
| california sea lion polyomavirus 2 | Yes | species | | | species | 2752309 | click here |
| california sea lion rotavirus 1 | Yes | species | | | species | 1073965 | click here |
| california sea lion sapelovirus 1 | Yes | species | | | species | 1073967 | click here |
| california sea lion sapelovirus 2 | Yes | species | | | species | 1073968 | click here |
| california sea lion sapovirus 1 | Yes | species | | | species | 1073970 | click here |
| california sea lion sapovirus 2 | Yes | species | | | species | 1073971 | click here |
| campylobacter insulaenigrae | Yes | species | bacteria | bacteria | species | 260714 | click here |
| campylobacter lari | Yes | species | bacteria | bacteria | species | 201 | click here |
| campylobacter sp. rm17260 | No | no rank | | | species | 1660067 | click here |
| campylobacter sp. rm17260 | Yes | no rank | | | species | 1660067 | click here |
| candida albicans | Yes | species | eukaryota | plants | species | 5476 | click here |
| candidatus mycoplasma haemozalophi | Yes | species | bacteria | bacteria | species | 689816 | click here |
| canine adenovirus 1 | Yes | no rank | viruses and viroids | viruses | no rank | 10512 | click here |
| canine distemper virus | No | species | viruses and viroids | viruses | species | 11232 | click here |
| canine distemper virus | Yes | species | viruses and viroids | viruses | species | 11232 | click here |
| canine mastadenovirus a | Yes | species | viruses and viroids | viruses | species | 10537 | click here |
| canine parvovirus | Yes | no rank | viruses and viroids | viruses | no rank | 10788 | click here |
| cetacean poxvirus 1 | Yes | species | viruses and viroids | viruses | species | 319748 | click here |
| chlamydia psittaci | Yes | species | bacteria | bacteria | species | 83554 | click here |
| clistobothrium sp. jh-2016 | Yes | no rank | | | species | 1891277 | click here |
| clostridium chauvoei | Yes | species | bacteria | bacteria | species | 46867 | click here |
| clostridium perfringens | Yes | species | bacteria | bacteria | species | 1502 | click here |
| coccidioides immitis | No | species | eukaryota | plants | species | 5501 | click here |
| coccidioides immitis | Yes | species | eukaryota | plants | species | 5501 | click here |
| contracaecum margolisi | Yes | species | eukaryota | invertebrates | species | 270452 | click here |
| contracaecum microcephalum | Yes | species | eukaryota | invertebrates | species | 142968 | click here |
| contracaecum ogmorhini | Yes | species | eukaryota | invertebrates | species | 139408 | click here |
| contracaecum ogmorhini sensu lato australia | Yes | species | | | species | 1902293 | click here |
| contracaecum ogmorhini sensu lato pacific canada | Yes | species | | | species | 1902295 | click here |
| contracaecum ogmorhini sensu lato south africa | Yes | species | | | species | 1902294 | click here |
| contracaecum osculatum | Yes | species | eukaryota | invertebrates | species | 106324 | click here |
| contracaecum sp. antarctic fur seal isolate av06c-1 | Yes | no rank | | | species | 1384597 | click here |
| contracaecum sp. san-2004 | Yes | no rank | eukaryota | invertebrates | species | 306024 | click here |
| corynosoma australe | Yes | species | eukaryota | invertebrates | species | 141686 | click here |
| corynosoma cetaceum | Yes | species | eukaryota | invertebrates | species | 141689 | click here |
| corynosoma hannae | Yes | species | | | species | 1913632 | click here |
| corynosoma obtuscens | Yes | species | | invertebrates | species | 1227245 | click here |
| corynosoma semerme | Yes | species | | | species | 2040616 | click here |
| corynosoma strumosum | Yes | species | eukaryota | invertebrates | species | 141827 | click here |
| corynosoma validum | Yes | species | eukaryota | invertebrates | species | 141828 | click here |
| corynosoma villosum | Yes | species | eukaryota | invertebrates | species | 141829 | click here |
| coxiella burnetii | Yes | species | bacteria | bacteria | species | 777 | click here |
| coxiella sp. sl1 | Yes | no rank | bacteria | bacteria | species | 751953 | click here |
| cryptococcus gattii vgi | Yes | species | | | species | 37769 | click here |
| cryptosporidium parvum | Yes | species | eukaryota | invertebrates | species | 5807 | click here |
| dipetalonema odendhali | Yes | species | | | species | | click here |
| diphyllobothrium cordatum | Yes | species | eukaryota | invertebrates | species | 372083 | click here |
| diphyllobothrium dalliae | Yes | species | | | species | | click here |
| diphyllobothrium sp. jb-2017 | Yes | no rank | | | species | 2015395 | click here |
| diphyllobothrium tetrapterum | Yes | species | | | species | 1933041 | click here |