| african horse sickness virus | Yes | species | viruses and viroids | viruses | species | 40050 | click here |
| aleutian mink disease virus | Yes | species | viruses and viroids | viruses | species | 28314 | click here |
| anaplasma phagocytophilum | Yes | species | bacteria | bacteria | species | 948 | click here |
| ancylostoma braziliense | Yes | species | eukaryota | invertebrates | species | 369059 | click here |
| ancylostoma tubaeforme | Yes | species | eukaryota | invertebrates | species | 53327 | click here |
| angiostrongylus vasorum | Yes | species | eukaryota | invertebrates | species | 321387 | click here |
| anopheles coluzzii | Yes | species | | | species | 1518534 | click here |
| anopheles gambiae | Yes | species | eukaryota | invertebrates | species | 7165 | click here |
| armillifer moliniformis | Yes | species | | | species | | click here |
| armillifer moniliformis | Yes | species | eukaryota | invertebrates | species | 764905 | click here |
| babesia annae | Yes | species | eukaryota | invertebrates | species | 1811913 | click here |
| babesia gibsoni | Yes | species | eukaryota | invertebrates | species | 33632 | click here |
| babesia leo | Yes | species | eukaryota | invertebrates | species | 124136 | click here |
| bartonella alsatica | Yes | species | bacteria | bacteria | species | 52764 | click here |
| bartonella clarridgeiae | Yes | species | bacteria | bacteria | species | 56426 | click here |
| bartonella henselae | Yes | species | bacteria | bacteria | species | 38323 | click here |
| bartonella rochalimae | Yes | species | bacteria | bacteria | species | 395923 | click here |
| bat coronavirus | Yes | species | | | species | 1508220 | click here |
| blastocystis sp. subtype 5 | Yes | no rank | eukaryota | plants | species | 944169 | click here |
| bluetongue virus | Yes | species | viruses and viroids | viruses | species | 40051 | click here |
| bottlenose dolphin coronavirus hku22 | Yes | no rank | | | no rank | 1433215 | click here |
| brugia malayi | Yes | species | eukaryota | invertebrates | species | 6279 | click here |
| brugia pahangi | Yes | species | eukaryota | invertebrates | species | 6280 | click here |
| brugia patei | Yes | species | eukaryota | invertebrates | species | 42154 | click here |
| canine adenovirus 1 | Yes | no rank | viruses and viroids | viruses | no rank | 10512 | click here |
| canine coronavirus | Yes | no rank | viruses and viroids | viruses | no rank | 11153 | click here |
| canine distemper virus | Yes | species | viruses and viroids | viruses | species | 11232 | click here |
| canine mastadenovirus a | Yes | species | viruses and viroids | viruses | species | 10537 | click here |
| canine parvovirus | No | no rank | viruses and viroids | viruses | no rank | 10788 | click here |
| canine parvovirus | Yes | no rank | viruses and viroids | viruses | no rank | 10788 | click here |
| canine parvovirus 2a | Yes | no rank | viruses and viroids | viruses | no rank | 497961 | click here |
| canine parvovirus 2c | Yes | no rank | viruses and viroids | viruses | no rank | 544789 | click here |
| caparinia ictonyctis | Yes | species | | | species | | click here |
| carnivore protoparvovirus 1 | Yes | species | | | species | 1511906 | click here |
| civet sars cov 007/2004 | No | no rank | viruses and viroids | viruses | no rank | 285945 | click here |
| corynebacterium faecale | Yes | species | | | species | 1758466 | click here |
| crenosoma striatum | Yes | species | eukaryota | invertebrates | species | 699426 | click here |
| crenosoma vulpis | Yes | species | eukaryota | invertebrates | species | 321390 | click here |
| cress virus sp. | Yes | species | | | species | 2202563 | click here |
| cryptosporidium sp. masked palm civet genotype | Yes | no rank | | | species | 1916686 | click here |
| ctenocephalides felis damarensis | Yes | subspecies | | | subspecies | 1658306 | click here |
| ctenocephalides felis strongylus | Yes | subspecies | | | subspecies | 1469617 | click here |
| cytauxzoon sp. | Yes | species | | | species | 1937407 | click here |
| dermacentor auratus | Yes | species | | | species | 1256036 | click here |
| echinococcus granulosus | Yes | species | eukaryota | invertebrates | species | 6210 | click here |
| ehrlichia canis | Yes | species | bacteria | bacteria | species | 944 | click here |
| enteractinococcus sp. yim 101632 | Yes | no rank | | | species | 1521435 | click here |
| enterocytozoon bieneusi | Yes | species | eukaryota | plants | species | 31281 | click here |
| escherichia coli | Yes | species | bacteria | bacteria | species | 562 | click here |
| felid herpesvirus 1 | Yes | species | viruses and viroids | viruses | species | 10334 | click here |
| feline calicivirus | Yes | species | viruses and viroids | viruses | species | 11978 | click here |
| feline coronavirus | Yes | no rank | viruses and viroids | viruses | no rank | 12663 | click here |
| feline immunodeficiency virus | Yes | species | viruses and viroids | viruses | species | 11673 | click here |
| feline leukemia virus | Yes | species | viruses and viroids | viruses | species | 11768 | click here |
| feline panleukopenia virus | Yes | no rank | viruses and viroids | viruses | no rank | 10786 | click here |
| feline parvovirus | Yes | species | viruses and viroids | viruses | species | 10785 | click here |
| genet fecal picobirnavirus | Yes | species | viruses and viroids | viruses | species | 1504565 | click here |
| genet fecal theilovirus | Yes | species | | | species | 1504546 | click here |
| giardia intestinalis | Yes | species | eukaryota | invertebrates | species | 5741 | click here |
| gnathostoma spinigerum | Yes | species | eukaryota | invertebrates | species | 75299 | click here |
| haemaphysalis asiatica | Yes | species | | | species | 1274519 | click here |
| haemaphysalis hystricis | Yes | species | | | species | 1155000 | click here |
| hepatozoon sp. djh-2016 | Yes | no rank | | | species | 1907162 | click here |
| hydatigera parva | Yes | species | eukaryota | invertebrates | species | 1434711 | click here |
| ikoma lyssavirus | Yes | species | | | species | 1167696 | click here |
| influenza a virus | No | species | viruses and viroids | viruses | species | 11320 | click here |
| influenza a virus | Yes | species | viruses and viroids | viruses | species | 11320 | click here |
| influenza a virus (a/civet cat/cambodia/x0313306/2013(h5n1)) | No | no rank | | | no rank | 1329868 | click here |
| influenza a virus (a/civet cat/cambodia/x0313307/2013(h5n1)) | No | no rank | | | no rank | 1329869 | click here |
| klebsiella pneumoniae | Yes | species | bacteria | bacteria | species | 573 | click here |
| kobuvirus bs14 | No | species | | | species | 1821747 | click here |
| leishmania donovani sensu lato | Yes | | | | subspecies | | click here |
| leishmania infantum | Yes | species | eukaryota | invertebrates | species | 5671 | click here |
| leptospira interrogans | Yes | species | bacteria | bacteria | species | 173 | click here |
| mamastrovirus sp. | Yes | species | | | species | 1912147 | click here |
| mammalian orthoreovirus | Yes | species | viruses and viroids | viruses | species | 351073 | click here |
| mammalian orthoreovirus 3 | Yes | no rank | viruses and viroids | viruses | no rank | 538123 | click here |
| mammalian orthorubulavirus 5 | Yes | species | | | species | 2560580 | click here |
| mangshi virus | Yes | species | | | species | 1766829 | click here |
| microbacterium sp. yim 100951 | Yes | no rank | | | species | 1336204 | click here |
| middle east respiratory syndrome coronavirus | Yes | species | viruses and viroids | viruses | species | 1335626 | click here |
| mokola virus | Yes | species | viruses and viroids | viruses | species | 12538 | click here |
| mycobacterium bovis | Yes | species | bacteria | bacteria | species | 1765 | click here |
| mycobacterium intracellulare | Yes | species | bacteria | bacteria | species | 1767 | click here |
| mycobacterium septicum | Yes | species | bacteria | bacteria | species | 98668 | click here |
| neospora caninum | Yes | species | eukaryota | invertebrates | species | 29176 | click here |
| norwalk virus | Yes | species | viruses and viroids | viruses | species | 11983 | click here |
| orthohepevirus a | Yes | species | | | species | 1678143 | click here |
| paguma larvata circovirus | Yes | no rank | | | no rank | 2294094 | click here |
| paguma larvata torque teno virus | Yes | no rank | | | no rank | 2219036 | click here |
| paragonimus skrjabini | Yes | species | eukaryota | invertebrates | species | 59630 | click here |
| piedraia quintanilhae | Yes | species | eukaryota | plants | species | 705560 | click here |
| plesiomonas shigelloides | Yes | species | bacteria | bacteria | species | 703 | click here |
| proteus mirabilis | Yes | species | bacteria | bacteria | species | 584 | click here |
| proteus vulgaris | Yes | species | bacteria | bacteria | species | 585 | click here |
| protoparvovirus sp. | Yes | species | | | species | 1987106 | click here |
| rabies virus | No | species | viruses and viroids | viruses | species | 11292 | click here |
| rabies virus | Yes | species | viruses and viroids | viruses | species | 11292 | click here |
| rotavirus a | Yes | species | viruses and viroids | viruses | species | 28875 | click here |
| rotavirus d | Yes | species | viruses and viroids | viruses | species | 335100 | click here |