| absidia glauca | No | species | eukaryota | plants | species | 4829 | click here |
| acremonium sp. | No | no rank | eukaryota | plants | species | 5045 | click here |
| aeromonas veronii | No | species | bacteria | bacteria | species | 654 | click here |
| ailurivirus a | No | species | | | species | 2560287 | click here |
| ancylostoma ailuropodae | No | species | | | species | 1676986 | click here |
| ancylostoma caninum | No | species | eukaryota | invertebrates | species | 29170 | click here |
| anisakis simplex | No | species | eukaryota | invertebrates | species | 6269 | click here |
| apiotrichum montevideense | No | species | eukaryota | plants | species | 82521 | click here |
| arthrinium sacchari | No | species | eukaryota | plants | species | 166626 | click here |
| ascaris lumbricoides | No | species | eukaryota | invertebrates | species | 6252 | click here |
| aspergillus versicolor | No | species | eukaryota | plants | species | 46472 | click here |
| aureobasidium pullulans | No | species | eukaryota | plants | species | 5580 | click here |
| babesia sp. | No | species | eukaryota | invertebrates | species | 35084 | click here |
| bacillus amyloliquefaciens | No | species | bacteria | bacteria | species | 1390 | click here |
| bacillus sp. aa1(2014) | No | no rank | | | species | 1454996 | click here |
| bacillus sp. aa2 | No | no rank | | | species | 1454997 | click here |
| bacillus sp. aa5 | No | no rank | | | species | 1454998 | click here |
| bacillus sp. aa6 | No | no rank | | | species | 1454999 | click here |
| bacillus sp. cf1 | No | no rank | | | species | 1455000 | click here |
| bacillus sp. gg2 | No | no rank | | | species | 1455001 | click here |
| bacillus sp. gg3(2014) | No | no rank | | | species | 1455002 | click here |
| bacillus sp. hc2(2014) | No | no rank | | | species | 1455003 | click here |
| bacillus sp. hc3(2014) | No | no rank | | | species | 1455004 | click here |
| bacillus sp. hh1 | No | no rank | | | species | 1455005 | click here |
| bacillus sp. hh2 | No | no rank | | | species | 1455006 | click here |
| bacillus sp. hh3(2014) | No | no rank | | | species | 1455007 | click here |
| bacillus sp. jx1 | No | no rank | | | species | 1455008 | click here |
| bacillus sp. jx2 | No | no rank | | | species | 1455009 | click here |
| bacillus sp. qy1 | No | no rank | | | species | 1455010 | click here |
| bacillus sp. qy2 | No | no rank | | | species | 1455011 | click here |
| bacillus sp. tt1 | No | no rank | | | species | 1455012 | click here |
| bacillus sp. wj1 | No | no rank | | | species | 1455013 | click here |
| bacillus sp. xl4 | No | no rank | | | species | 1455014 | click here |
| bacillus sp. xm1 | No | no rank | | | species | 1455015 | click here |
| bacillus sp. yh4 | No | no rank | | | species | 1455016 | click here |
| bacillus sp. yh5 | No | no rank | | | species | 1455017 | click here |
| bacillus sp. yh6 | No | no rank | | | species | 1455018 | click here |
| bacillus sp. yh7 | No | no rank | | | species | 1455019 | click here |
| bacillus sp. yh8 | No | no rank | | | species | 1455020 | click here |
| bacillus sp. yy2 | No | no rank | | | species | 1455021 | click here |
| bacillus sp. zx2(2014) | No | no rank | | | species | 1455022 | click here |
| bacillus subtilis | No | species | bacteria | bacteria | species | 1423 | click here |
| baylisascaris ailuri | No | species | eukaryota | invertebrates | species | 941948 | click here |
| baylisascaris schroederi | No | species | eukaryota | invertebrates | species | 522413 | click here |
| baylisascaris transfuga | No | species | eukaryota | invertebrates | species | 6260 | click here |
| blastocystis sp. | No | species | eukaryota | plants | species | 46767 | click here |
| candida catenulata | No | species | eukaryota | plants | species | 45537 | click here |
| candida sp. | No | species | | | species | 1853550 | click here |
| canid herpesvirus 1 | No | species | viruses and viroids | viruses | species | 170325 | click here |
| canine adenovirus 2 | No | no rank | viruses and viroids | viruses | no rank | 10514 | click here |
| canine coronavirus | No | no rank | viruses and viroids | viruses | no rank | 11153 | click here |
| canine distemper virus | No | species | viruses and viroids | viruses | species | 11232 | click here |
| canine mastadenovirus a | No | species | viruses and viroids | viruses | species | 10537 | click here |
| canine parainfluenza virus | No | species | viruses and viroids | viruses | species | 149595 | click here |
| canine parvovirus | No | no rank | viruses and viroids | viruses | no rank | 10788 | click here |
| cellulomonas iranensis | No | species | bacteria | bacteria | species | 76862 | click here |
| cellulosilyticum lentocellum | No | species | bacteria | bacteria | species | 29360 | click here |
| chaetothyriales sp. | No | species | | | species | 1715222 | click here |
| chalara sp. | No | no rank | eukaryota | plants | species | 36534 | click here |
| chryseobacterium chengduensis | No | species | | | species | 1685413 | click here |
| circovirus sp. | No | species | | | species | 1964372 | click here |
| cladosporium cladosporioides | No | species | eukaryota | plants | species | 29917 | click here |
| cladosporium sp. | No | species | | | species | 1707700 | click here |
| cladosporium sp. xq3-13 | No | no rank | | | species | 1773458 | click here |
| cladosporium sphaerospermum | No | species | eukaryota | plants | species | 92950 | click here |
| cordyceps confragosa | No | species | | | species | 1105325 | click here |
| cosmospora viridescens | No | species | | | species | 1053086 | click here |
| cryptosporidium andersoni | No | species | eukaryota | invertebrates | species | 117008 | click here |
| cryptosporidium hominis | No | species | eukaryota | invertebrates | species | 237895 | click here |
| cryptosporidium muris | No | species | eukaryota | invertebrates | species | 5808 | click here |
| cryptosporidium parvum | No | species | eukaryota | invertebrates | species | 5807 | click here |
| cryptosporidium sp. giant panda genotype | No | no rank | | | species | 1132025 | click here |
| cryptosporidium sp. xhl-01 | No | no rank | | | species | 1095637 | click here |
| cutaneotrichosporon guehoae | No | species | eukaryota | plants | species | 105714 | click here |
| cutaneotrichosporon moniliiforme | No | species | | | species | 1895941 | click here |
| cyphellophora olivacea | No | species | eukaryota | plants | species | 293229 | click here |
| cyphellophora pluriseptata | No | species | eukaryota | plants | species | 856652 | click here |
| cyphellophora sessilis | No | species | eukaryota | plants | species | 293231 | click here |
| dicistroviridae sp. | No | species | | | species | 1955144 | click here |
| didymella glomerata | No | species | eukaryota | plants | species | 749621 | click here |
| doratomyces sp. | No | species | | | species | 1856739 | click here |
| doratomyces stemonitis | No | species | eukaryota | plants | species | 186354 | click here |
| enterobacter cloacae | No | species | bacteria | bacteria | species | 550 | click here |
| enterobacter cloacae subsp. cloacae 08xa1 | No | no rank | | | no rank | 1203195 | click here |
| enterococcus durans | No | species | bacteria | bacteria | species | 53345 | click here |
| enterococcus faecalis | No | species | bacteria | bacteria | species | 1351 | click here |
| enterococcus faecium | No | species | bacteria | bacteria | species | 1352 | click here |
| enterococcus hirae | No | species | bacteria | bacteria | species | 1354 | click here |
| enterococcus thailandicus | No | species | bacteria | bacteria | species | 417368 | click here |
| enterocytozoon bieneusi | No | species | eukaryota | plants | species | 31281 | click here |
| environmental samples | No | | | environmental samples | no rank | 333811 | click here |
| environmental samples | No | | | environmental samples | no rank | 359183 | click here |
| environmental samples | No | | | | no rank | 1629145 | click here |
| escherichia coli | No | species | bacteria | bacteria | species | 562 | click here |
| exophiala alcalophila | No | species | eukaryota | plants | species | 91920 | click here |
| exophiala attenuata | No | species | eukaryota | plants | species | 214034 | click here |
| exophiala sp. j17 | No | no rank | | | species | 1969586 | click here |
| exophiala sp. j23 | No | no rank | | | species | 1969584 | click here |
| exophiala sp. j31 | No | no rank | | | species | 1969585 | click here |
| exophiala sp. xq3-10 | No | no rank | | | species | 1773488 | click here |