| [clostridium] piliforme | No | species | bacteria | bacteria | species | 1524 | click here |
| acanthocheilonema reconditum | No | species | eukaryota | invertebrates | species | 114234 | click here |
| alaria alata | No | species | eukaryota | invertebrates | species | 138590 | click here |
| alaria americana | No | species | | | species | | click here |
| alaria arisaemoides | No | species | | | species | | click here |
| alaria canis | No | species | | | species | | click here |
| alaria marcianae | No | species | | | species | 1684801 | click here |
| alaria michiganensis | No | species | | | species | | click here |
| alaria mustelae | No | species | eukaryota | invertebrates | species | 669500 | click here |
| alphacoronavirus 1 | No | species | viruses and viroids | viruses | species | 693997 | click here |
| amblyomma maculatum | No | species | eukaryota | invertebrates | species | 34609 | click here |
| amblyomma mixtum | No | species | | | species | 1581418 | click here |
| anaplasma phagocytophilum | No | species | bacteria | bacteria | species | 948 | click here |
| ancylostoma caninum | No | species | eukaryota | invertebrates | species | 29170 | click here |
| angiostrongylus vasorum | No | species | eukaryota | invertebrates | species | 321387 | click here |
| anopheles punctipennis | No | species | eukaryota | invertebrates | species | 102899 | click here |
| babesia canis | No | species | eukaryota | invertebrates | species | 5867 | click here |
| babesia gibsoni | No | species | eukaryota | invertebrates | species | 33632 | click here |
| babesia microti | No | species | eukaryota | invertebrates | species | 5868 | click here |
| bartonella rochalimae | No | species | bacteria | bacteria | species | 395923 | click here |
| bartonella sp. coyote22sub2 | No | no rank | | | species | 1933911 | click here |
| bartonella vinsonii | No | species | bacteria | bacteria | species | 33047 | click here |
| bartonella vinsonii subsp. berkhoffii | No | subspecies | bacteria | bacteria | subspecies | 40933 | click here |
| borrelia turicatae | No | species | bacteria | bacteria | species | 142 | click here |
| borreliella burgdorferi | No | species | bacteria | bacteria | species | 139 | click here |
| brucella abortus | No | species | bacteria | bacteria | species | 235 | click here |
| brucella canis | No | species | bacteria | bacteria | species | 36855 | click here |
| california encephalitis virus | No | no rank | viruses and viroids | viruses | no rank | 35305 | click here |
| campylobacter jejuni | No | species | bacteria | bacteria | species | 197 | click here |
| campylobacter upsaliensis | No | species | bacteria | bacteria | species | 28080 | click here |
| canid herpesvirus 1 | No | species | viruses and viroids | viruses | species | 170325 | click here |
| canine adenovirus 1 | No | no rank | viruses and viroids | viruses | no rank | 10512 | click here |
| canine adenovirus 2 | No | no rank | viruses and viroids | viruses | no rank | 10514 | click here |
| canine coronavirus | No | no rank | viruses and viroids | viruses | no rank | 11153 | click here |
| canine distemper virus | No | species | viruses and viroids | viruses | species | 11232 | click here |
| canine mastadenovirus a | No | species | viruses and viroids | viruses | species | 10537 | click here |
| canine parainfluenza virus | No | species | viruses and viroids | viruses | species | 149595 | click here |
| canine parvovirus | No | no rank | viruses and viroids | viruses | no rank | 10788 | click here |
| canine parvovirus 2 | No | no rank | viruses and viroids | viruses | no rank | 246878 | click here |
| capillaria aerophila | No | species | | | species | 1172388 | click here |
| capillaria hepatica | No | species | | | species | 1239592 | click here |
| capillaria plica | No | species | | | species | 1239593 | click here |
| carnivore chaphamaparvovirus 1 | No | species | | | species | 2734297 | click here |
| carnivore protoparvovirus 1 | No | species | | | species | 1511906 | click here |
| clostridium botulinum | No | species | bacteria | bacteria | species | 1491 | click here |
| contracaecum spiculigerum | No | species | eukaryota | invertebrates | species | 292499 | click here |
| coquillettidia perturbans | No | species | eukaryota | invertebrates | species | 329111 | click here |
| coxiella burnetii | No | species | bacteria | bacteria | species | 777 | click here |
| crenosoma vulpis | No | species | eukaryota | invertebrates | species | 321390 | click here |
| cryptocotyle lingua | No | species | eukaryota | invertebrates | species | 66766 | click here |
| cryptosporidium canis | No | species | eukaryota | invertebrates | species | 195482 | click here |
| cryptosporidium parvum | No | species | eukaryota | invertebrates | species | 5807 | click here |
| cryptosporidium sp. ex canis latrans | No | no rank | eukaryota | invertebrates | species | 372578 | click here |
| culex pipiens | No | species | eukaryota | invertebrates | species | 7175 | click here |
| culex quinquefasciatus | No | species | eukaryota | invertebrates | species | 7176 | click here |
| culiseta melanura | No | species | eukaryota | invertebrates | species | 329109 | click here |
| cystoisospora canis | No | species | | | species | 1662860 | click here |
| cystoisospora ohioensis | No | species | eukaryota | invertebrates | species | 279926 | click here |
| dermacentor albipictus | No | species | eukaryota | invertebrates | species | 60249 | click here |
| dipylidium caninum | No | species | eukaryota | invertebrates | species | 66787 | click here |
| dirofilaria immitis | No | species | eukaryota | invertebrates | species | 6287 | click here |
| eastern equine encephalitis virus | No | species | viruses and viroids | viruses | species | 11021 | click here |
| echinococcus canadensis | No | species | eukaryota | invertebrates | species | 519352 | click here |
| echinococcus granulosus | No | species | eukaryota | invertebrates | species | 6210 | click here |
| echinococcus multilocularis | No | species | eukaryota | invertebrates | species | 6211 | click here |
| ehrlichia canis | No | species | bacteria | bacteria | species | 944 | click here |
| ehrlichia chaffeensis | No | species | bacteria | bacteria | species | 945 | click here |
| ehrlichia ewingii | No | species | bacteria | bacteria | species | 947 | click here |
| ehrlichia sp. capl | No | no rank | bacteria | bacteria | species | 102149 | click here |
| ehrlichia sp. casc | No | no rank | bacteria | bacteria | species | 101948 | click here |
| ehrlichia sp. cate | No | no rank | bacteria | bacteria | species | 101949 | click here |
| environmental samples | No | | | environmental samples | no rank | 333811 | click here |
| environmental samples | No | | | environmental samples | no rank | 359183 | click here |
| environmental samples | No | | | | no rank | 1629145 | click here |
| escherichia coli | No | species | bacteria | bacteria | species | 562 | click here |
| escherichia sp. souza-273 | No | no rank | bacteria | bacteria | species | 126124 | click here |
| feline panleukopenia virus | No | no rank | viruses and viroids | viruses | no rank | 10786 | click here |
| filaroides osleri | No | species | | | species | | click here |
| francisella tularensis | No | species | bacteria | bacteria | species | 263 | click here |
| giardia intestinalis | No | species | eukaryota | invertebrates | species | 5741 | click here |
| h1n1 subtype | No | no rank | viruses and viroids | viruses | no rank | 114727 | click here |
| haemaphysalis longicornis | No | species | eukaryota | invertebrates | species | 44386 | click here |
| hammondia heydorni | No | species | eukaryota | invertebrates | species | 99159 | click here |
| hepatozoon americanum | No | species | eukaryota | invertebrates | species | 110119 | click here |
| hepatozoon canis | No | species | eukaryota | invertebrates | species | 110120 | click here |
| hepatozoon sp. ex canis latrans kea-2011 | No | no rank | | | species | 1080278 | click here |
| heterobilharzia americana | No | species | eukaryota | invertebrates | species | 39320 | click here |
| histoplasma capsulatum | No | species | eukaryota | plants | species | 5037 | click here |
| hymenolepis diminuta | No | species | eukaryota | invertebrates | species | 6216 | click here |
| influenza a virus | No | species | viruses and viroids | viruses | species | 11320 | click here |
| lambdapapillomavirus 2 | No | species | viruses and viroids | viruses | species | 35258 | click here |
| lawsonia intracellularis | No | species | bacteria | bacteria | species | 29546 | click here |
| leptospira interrogans | No | species | bacteria | bacteria | species | 173 | click here |
| malassezia pachydermatis | No | species | eukaryota | plants | species | 77020 | click here |
| mastophorus muris | No | species | | | species | 1499391 | click here |
| mesocestoides lineatus | No | species | eukaryota | invertebrates | species | 160008 | click here |
| mesocestoides sp. a kp-2005 | No | no rank | eukaryota | invertebrates | species | 332180 | click here |
| mesocestoides sp. b kp-2005 | No | no rank | eukaryota | invertebrates | species | 337325 | click here |
| mesocestoides sp. cl1m1 | No | no rank | eukaryota | invertebrates | species | 101171 | click here |
| mesocestoides sp. cl2m1 | No | no rank | eukaryota | invertebrates | species | 101172 | click here |