| aedes taylori | Yes | species | eukaryota | invertebrates | species | 299628 | click here |
| alphapapillomavirus 12 | Yes | species | viruses and viroids | viruses | species | 10570 | click here |
| anopheles coluzzii | Yes | species | | | species | 1518534 | click here |
| anopheles gambiae | Yes | species | eukaryota | invertebrates | species | 7165 | click here |
| anubis baboon polyomavirus | Yes | no rank | | | no rank | 1608532 | click here |
| babesia microti | Yes | species | eukaryota | invertebrates | species | 5868 | click here |
| babesia sp. | Yes | species | eukaryota | invertebrates | species | 35084 | click here |
| babesia sp. kmg-2009a | No | no rank | eukaryota | invertebrates | species | 635000 | click here |
| babesia sp. kmg-2009a | Yes | no rank | eukaryota | invertebrates | species | 635000 | click here |
| baboon cytomegalovirus | No | species | viruses and viroids | viruses | species | 120505 | click here |
| baboon cytomegalovirus | Yes | species | viruses and viroids | viruses | species | 120505 | click here |
| baboon endogenous virus | Yes | species | viruses and viroids | viruses | species | 196403 | click here |
| baboon endogenous virus strain m7 | Yes | no rank | viruses and viroids | viruses | no rank | 11764 | click here |
| baboon enterovirus | Yes | no rank | viruses and viroids | viruses | no rank | 172022 | click here |
| baboon gamma-herpesvirus | Yes | no rank | viruses and viroids | viruses | no rank | 169974 | click here |
| baboon orthoreovirus | No | species | viruses and viroids | viruses | species | 75888 | click here |
| baboon orthoreovirus | Yes | species | viruses and viroids | viruses | species | 75888 | click here |
| baboon polyomavirus 2 | Yes | species | | viruses | species | | click here |
| baboon t-cell leukemia virus | Yes | no rank | viruses and viroids | viruses | no rank | 47688 | click here |
| bacillus anthracis | Yes | species | bacteria | bacteria | species | 1392 | click here |
| bertiella studeri | Yes | species | eukaryota | invertebrates | species | 578852 | click here |
| bifidobacterium pseudocatenulatum | Yes | species | bacteria | bacteria | species | 28026 | click here |
| bifidobacterium sp. | Yes | no rank | bacteria | bacteria | species | 41200 | click here |
| blastocystis hominis | Yes | species | eukaryota | plants | species | 12968 | click here |
| blastocystis sp. | Yes | species | eukaryota | plants | species | 46767 | click here |
| blastocystis sp. subtype 1 | Yes | no rank | eukaryota | plants | species | 944036 | click here |
| blastocystis sp. subtype 3 | No | no rank | eukaryota | plants | species | 944168 | click here |
| blastocystis sp. subtype 3 | Yes | no rank | eukaryota | plants | species | 944168 | click here |
| bouboui virus | Yes | species | viruses and viroids | viruses | species | 64295 | click here |
| brucella papionis | No | species | | | species | 1462582 | click here |
| brugia malayi | Yes | species | eukaryota | invertebrates | species | 6279 | click here |
| buxtonella-like sp. bc13 | Yes | no rank | | | species | 1144362 | click here |
| buxtonella-like sp. bc132 | Yes | no rank | | | species | 1144363 | click here |
| buxtonella-like sp. bc160 | Yes | no rank | | | species | 1144364 | click here |
| buxtonella-like sp. bc184 | Yes | no rank | | | species | 1144367 | click here |
| buxtonella-like sp. bc2 | Yes | no rank | | | species | 1144369 | click here |
| buxtonella-like sp. bc4 | Yes | no rank | | | species | 1144370 | click here |
| buxtonella-like sp. bc5 | Yes | no rank | | | species | 1144371 | click here |
| candida albicans | Yes | species | eukaryota | plants | species | 5476 | click here |
| cercopithecine herpesvirus 2 | Yes | species | viruses and viroids | viruses | species | 10317 | click here |
| chikungunya virus | Yes | species | viruses and viroids | viruses | species | 37124 | click here |
| chilomastix mesnili | Yes | species | eukaryota | invertebrates | species | 472572 | click here |
| chlamydia pneumoniae | Yes | species | bacteria | bacteria | species | 83558 | click here |
| clostridium perfringens | Yes | species | bacteria | bacteria | species | 1502 | click here |
| coxsackievirus b2 | Yes | no rank | viruses and viroids | viruses | no rank | 82639 | click here |
| coxsackievirus b3 | Yes | no rank | viruses and viroids | viruses | no rank | 12072 | click here |
| cryptosporidium hominis | No | species | eukaryota | invertebrates | species | 237895 | click here |
| cryptosporidium muris | Yes | species | eukaryota | invertebrates | species | 5808 | click here |
| cryptosporidium parvum | Yes | species | eukaryota | invertebrates | species | 5807 | click here |
| cyathostominae sp. ex baboon vo-2016 | No | no rank | | | species | 1784985 | click here |
| cyathostominae sp. h29 | Yes | no rank | | | species | 1880956 | click here |
| cyathostominae sp. h30 | Yes | no rank | | | species | 1880957 | click here |
| cyathostominae sp. m3 | Yes | no rank | | | species | 1880958 | click here |
| cyathostominae sp. m57 | Yes | no rank | | | species | 1880959 | click here |
| cyclospora cercopitheci | Yes | species | eukaryota | invertebrates | species | 88457 | click here |
| cyclospora colobi | Yes | species | eukaryota | invertebrates | species | 88458 | click here |
| cyclospora papionis | Yes | species | eukaryota | invertebrates | species | 88459 | click here |
| dengue virus | Yes | species | viruses and viroids | viruses | species | 12637 | click here |
| dengue virus 2 | Yes | no rank | viruses and viroids | viruses | no rank | 11060 | click here |
| dipetalonema gracile | Yes | species | eukaryota | invertebrates | species | 221945 | click here |
| dracunculus medinensis | Yes | species | eukaryota | invertebrates | species | 318479 | click here |
| ebola virus | Yes | subspecies | viruses and viroids | viruses | no rank | 1570291 | click here |
| echinococcus granulosus | Yes | species | eukaryota | invertebrates | species | 6210 | click here |
| echovirus e7 | Yes | no rank | viruses and viroids | viruses | no rank | 46018 | click here |
| encephalomyocarditis virus | Yes | no rank | viruses and viroids | viruses | no rank | 12104 | click here |
| entamoeba chattoni | Yes | species | eukaryota | invertebrates | species | 110765 | click here |
| entamoeba coli | Yes | species | eukaryota | invertebrates | species | 110766 | click here |
| entamoeba hartmanni | Yes | species | eukaryota | invertebrates | species | 110767 | click here |
| entamoeba histolytica | Yes | species | eukaryota | invertebrates | species | 5759 | click here |
| enterobius vermicularis | Yes | species | eukaryota | invertebrates | species | 51028 | click here |
| enterococcus sp. enrichment culture | No | no rank | | | species | 1735984 | click here |
| enterocytozoon bieneusi | No | species | eukaryota | plants | species | 31281 | click here |
| enterocytozoon bieneusi | Yes | species | eukaryota | plants | species | 31281 | click here |
| enterovirus a | Yes | species | viruses and viroids | viruses | species | 138948 | click here |
| enterovirus b | Yes | species | viruses and viroids | viruses | species | 138949 | click here |
| enterovirus h | Yes | species | viruses and viroids | viruses | species | 310907 | click here |
| enterovirus j | Yes | species | | | species | 1330521 | click here |
| enterovirus sp. | Yes | no rank | viruses and viroids | viruses | species | 47681 | click here |
| escherichia coli | Yes | species | bacteria | bacteria | species | 562 | click here |
| giardia intestinalis | Yes | species | eukaryota | invertebrates | species | 5741 | click here |
| hamadryas baboon polyomavirus | Yes | species | viruses and viroids | viruses | species | 887571 | click here |
| hepadnaviridae | Yes | | | viruses | family | 10404 | click here |
| hepatitis b virus | Yes | species | viruses and viroids | viruses | species | 10407 | click here |
| hepatovirus a | Yes | species | viruses and viroids | viruses | species | 12092 | click here |
| herpesvirales sp. | Yes | species | | | species | 1927716 | click here |
| histoplasma capsulatum var. duboisii | Yes | varietas | eukaryota | plants | varietas | 149546 | click here |
| human endogenous retrovirus | Yes | species | viruses and viroids | viruses | species | 11827 | click here |
| human hepatitis a virus | Yes | no rank | viruses and viroids | viruses | no rank | 208726 | click here |
| human herpesvirus 4 | Yes | species | viruses and viroids | viruses | species | 10376 | click here |
| human herpesvirus 5 | Yes | species | viruses and viroids | viruses | species | 10359 | click here |
| human herpesvirus 8 | Yes | species | viruses and viroids | viruses | species | 37296 | click here |
| human immunodeficiency virus 2 | Yes | species | viruses and viroids | viruses | species | 11709 | click here |
| human orthorubulavirus 2 | Yes | species | | | species | 2560525 | click here |
| human parainfluenza virus 3 | Yes | species | viruses and viroids | viruses | species | 11216 | click here |
| human parvovirus 4 | Yes | species | viruses and viroids | viruses | species | 289365 | click here |
| human t-lymphotropic virus 1 | Yes | no rank | viruses and viroids | viruses | no rank | 11908 | click here |
| hymenolepis nana | Yes | species | eukaryota | invertebrates | species | 102285 | click here |
| influenza a virus | Yes | species | viruses and viroids | viruses | species | 11320 | click here |
| kunsagivirus c1 | Yes | isolate | | | isolate | 2870349 | click here |
| lactobacillus animalis kctc 3501 = dsm 20602 | No | no rank | bacteria | bacteria | no rank | 930942 | click here |