| ancylostoma duodenale | Yes | species | eukaryota | invertebrates | species | 51022 | click here |
| ascaris lumbricoides | Yes | species | eukaryota | invertebrates | species | 6252 | click here |
| aspergillus fumigatus | Yes | species | eukaryota | plants | species | 746128 | click here |
| bertiella studeri | Yes | species | eukaryota | invertebrates | species | 578852 | click here |
| bifidobacterium animalis subsp. lactis | Yes | subspecies | bacteria | bacteria | subspecies | 302911 | click here |
| blastocystis hominis | Yes | species | eukaryota | plants | species | 12968 | click here |
| blastocystis sp. | Yes | species | eukaryota | plants | species | 46767 | click here |
| blastocystis sp. subtype 1 | Yes | no rank | eukaryota | plants | species | 944036 | click here |
| blastocystis sp. subtype 10 | Yes | no rank | eukaryota | plants | species | 944207 | click here |
| bocaparvovirus sp. | Yes | species | | | species | 1883111 | click here |
| bwamba virus | Yes | species | viruses and viroids | viruses | species | 35310 | click here |
| cercopithecus campbelli adenovirus | Yes | species | | | species | 1916691 | click here |
| cercopithecus cephus cytomegalovirus 1 | Yes | species | viruses and viroids | viruses | species | 308706 | click here |
| cercopithecus cephus foamy virus | Yes | no rank | | | no rank | 1100836 | click here |
| cercopithecus cephus lymphocrytovirus 1 | Yes | species | viruses and viroids | viruses | species | 291843 | click here |
| cercopithecus diana adenovirus | Yes | species | | | species | 1916692 | click here |
| cercopithecus erythrotis polyomavirus 1 | Yes | species | | | species | 1236395 | click here |
| cercopithecus hamlyni lymphocryptovirus 1 | Yes | species | viruses and viroids | viruses | species | 291839 | click here |
| cercopithecus kandti cytomegalovirus | Yes | species | | | species | 1869107 | click here |
| cercopithecus kandti lymphocryptovirus | Yes | species | | | species | 1869105 | click here |
| cercopithecus kandti rhadinovirus | Yes | species | | | species | 1869109 | click here |
| cercopithecus neglectus foamy virus | Yes | no rank | | | no rank | 1100837 | click here |
| cercopithecus neglectus lymphocryptovirus 1 | Yes | species | viruses and viroids | viruses | species | 308705 | click here |
| cercopithecus neglectus lymphocryptovirus 2 | Yes | species | viruses and viroids | viruses | species | 291835 | click here |
| cercopithecus nictitans foamy virus | Yes | no rank | | | no rank | 1100838 | click here |
| cercopithecus nictitans lymphocryptovirus 1 | Yes | species | viruses and viroids | viruses | species | 291841 | click here |
| cercopithecus solatus foamy virus | Yes | no rank | | | no rank | 1100839 | click here |
| chikungunya virus | Yes | species | viruses and viroids | viruses | species | 37124 | click here |
| chilomastix mesnili | Yes | species | eukaryota | invertebrates | species | 472572 | click here |
| clostridium ventriculi | Yes | species | bacteria | bacteria | species | 1267 | click here |
| coxsackievirus b3 | Yes | no rank | viruses and viroids | viruses | no rank | 12072 | click here |
| cryptococcus neoformans | Yes | species | eukaryota | plants | species | 5207 | click here |
| cyclospora cayetanensis | Yes | species | eukaryota | invertebrates | species | 88456 | click here |
| debrazza's monkey arterivirus | Yes | no rank | | | no rank | 1965063 | click here |
| ebola virus | Yes | subspecies | viruses and viroids | viruses | no rank | 1570291 | click here |
| echinococcus granulosus | Yes | species | eukaryota | invertebrates | species | 6210 | click here |
| echinococcus multilocularis | Yes | species | eukaryota | invertebrates | species | 6211 | click here |
| echovirus e11 | Yes | no rank | viruses and viroids | viruses | no rank | 12078 | click here |
| encephalitozoon intestinalis | Yes | species | eukaryota | plants | species | 58839 | click here |
| endolimax nana | Yes | species | eukaryota | invertebrates | species | 110788 | click here |
| entamoeba coli | Yes | species | eukaryota | invertebrates | species | 110766 | click here |
| entamoeba hartmanni | Yes | species | eukaryota | invertebrates | species | 110767 | click here |
| entamoeba histolytica | Yes | species | eukaryota | invertebrates | species | 5759 | click here |
| enterobius vermicularis | Yes | species | eukaryota | invertebrates | species | 51028 | click here |
| enterocytozoon bieneusi | Yes | species | eukaryota | plants | species | 31281 | click here |
| enterovirus sp. | Yes | no rank | viruses and viroids | viruses | species | 47681 | click here |
| escherichia coli | Yes | species | bacteria | bacteria | species | 562 | click here |
| francisella tularensis | Yes | species | bacteria | bacteria | species | 263 | click here |
| giardia intestinalis | No | species | eukaryota | invertebrates | species | 5741 | click here |
| giardia intestinalis | Yes | species | eukaryota | invertebrates | species | 5741 | click here |
| hepatitis b virus | Yes | species | viruses and viroids | viruses | species | 10407 | click here |
| hepatocystis sp. | Yes | species | eukaryota | invertebrates | species | 77567 | click here |
| hepatocystis sp. aa-2012 | Yes | no rank | | | species | 1164881 | click here |
| hepatocystis sp. ngl/ccm | Yes | no rank | | | species | 1054207 | click here |
| hepatocystis sp. wn1859/cc | Yes | no rank | | | species | 1054210 | click here |
| human coronavirus 229e | Yes | species | viruses and viroids | viruses | species | 11137 | click here |
| human mastadenovirus f | Yes | species | viruses and viroids | viruses | species | 130309 | click here |
| human orthorubulavirus 2 | Yes | species | | | species | 2560525 | click here |
| human parainfluenza virus 1 | Yes | species | viruses and viroids | viruses | species | 12730 | click here |
| human parainfluenza virus 3 | Yes | species | viruses and viroids | viruses | species | 11216 | click here |
| human respiratory syncytial virus | Yes | species | viruses and viroids | viruses | species | 11250 | click here |
| human t-lymphotropic virus 1 | Yes | no rank | viruses and viroids | viruses | no rank | 11908 | click here |
| human t-lymphotropic virus 2 | Yes | no rank | viruses and viroids | viruses | no rank | 11909 | click here |
| hymenolepis nana | Yes | species | eukaryota | invertebrates | species | 102285 | click here |
| influenza a virus | Yes | species | viruses and viroids | viruses | species | 11320 | click here |
| influenza b virus | Yes | species | viruses and viroids | viruses | species | 11520 | click here |
| kibale red-tailed guenon virus 1 | Yes | no rank | | | no rank | 1965065 | click here |
| leishmania major | Yes | species | eukaryota | invertebrates | species | 5664 | click here |
| macacine herpesvirus 1 | Yes | species | viruses and viroids | viruses | species | 10325 | click here |
| monkeypox virus | Yes | species | viruses and viroids | viruses | species | 10244 | click here |
| mumps orthorubulavirus | Yes | species | | | species | 2560602 | click here |
| mycobacterium avium | Yes | species | bacteria | bacteria | species | 1764 | click here |
| mycobacterium avium complex | Yes | subspecies | bacteria | bacteria | species | 37162 | click here |
| mycobacterium genavense | Yes | species | bacteria | bacteria | species | 36812 | click here |
| neobalantidium coli | Yes | species | eukaryota | invertebrates | species | 71585 | click here |
| oesophagostomum bifurcum | Yes | species | eukaryota | invertebrates | species | 61179 | click here |
| oesophagostomum dentatum | Yes | species | eukaryota | invertebrates | species | 61180 | click here |
| oesophagostomum sp. 175 | Yes | no rank | | | species | 1441748 | click here |
| oesophagostomum sp. 176 | Yes | no rank | | | species | 1441749 | click here |
| oesophagostomum sp. 194 | Yes | no rank | | | species | 1441752 | click here |
| oesophagostomum sp. 217 | Yes | no rank | | | species | 1441755 | click here |
| oesophagostomum sp. 252 | Yes | no rank | | | species | 1441756 | click here |
| oesophagostomum sp. 253 | Yes | no rank | | | species | 1441757 | click here |
| oesophagostomum sp. 261 | Yes | no rank | | | species | 1441758 | click here |
| oesophagostomum sp. 262 | Yes | no rank | | | species | 1441759 | click here |
| oesophagostomum sp. 264 | Yes | no rank | | | species | 1441760 | click here |
| oesophagostomum sp. 43 | Yes | no rank | | | species | 1441761 | click here |
| oesophagostomum stephanostomum | Yes | species | eukaryota | invertebrates | species | 92252 | click here |
| orungo virus | Yes | species | | | species | 40058 | click here |
| picornaviridae sp. | Yes | species | | | species | 1530251 | click here |
| plasmodium falciparum | Yes | species | eukaryota | invertebrates | species | 5833 | click here |
| plasmodium sp. daj-2004 | Yes | no rank | eukaryota | invertebrates | species | 300941 | click here |
| pneumocystis carinii | Yes | species | eukaryota | plants | species | 4754 | click here |
| primate t-lymphotropic virus 1 | Yes | species | viruses and viroids | viruses | species | 194440 | click here |
| primate t-lymphotropic virus 2 | Yes | species | viruses and viroids | viruses | species | 194441 | click here |
| primate t-lymphotropic virus 3 | Yes | species | viruses and viroids | viruses | species | 194443 | click here |
| protospirura muricola | Yes | species | | | species | 1766045 | click here |
| rickettsia felis | Yes | species | bacteria | bacteria | species | 42862 | click here |
| schistosoma mansoni | Yes | species | eukaryota | invertebrates | species | 6183 | click here |
| semliki forest virus | Yes | species | viruses and viroids | viruses | species | 11033 | click here |