| alouatta guariba papillomavirus 1 | Yes | species | | | species | 1784959 | click here |
| alouatta macconnelli cytomegalovirus | Yes | species | | | species | 1881000 | click here |
| alouatta palliata cytomegalovirus | Yes | species | | | species | 1881001 | click here |
| alouatta seniculus cytomegalovirus | Yes | species | | | species | 1881002 | click here |
| amblyomma geayi | Yes | species | eukaryota | invertebrates | species | 251383 | click here |
| ancylostoma tubaeforme | Yes | species | eukaryota | invertebrates | species | 53327 | click here |
| angiostrongylus cantonensis | Yes | species | eukaryota | invertebrates | species | 6313 | click here |
| anopheles punctimacula | Yes | species | eukaryota | invertebrates | species | 190378 | click here |
| argentinian mammarenavirus | Yes | species | | | species | 2169991 | click here |
| aroa virus | Yes | species | viruses and viroids | viruses | species | 64303 | click here |
| ascaris lumbricoides | Yes | species | eukaryota | invertebrates | species | 6252 | click here |
| aspergillus fumigatus | No | species | eukaryota | plants | species | 746128 | click here |
| black howler monkey smacovirus | Yes | species | | | species | 1603066 | click here |
| blastocystis hominis | Yes | species | eukaryota | plants | species | 12968 | click here |
| blastocystis sp. | Yes | species | eukaryota | plants | species | 46767 | click here |
| blastocystis sp. subtype 1 | Yes | no rank | eukaryota | plants | species | 944036 | click here |
| blastocystis sp. subtype 2 | Yes | no rank | eukaryota | plants | species | 944160 | click here |
| blastocystis sp. subtype 8 | Yes | no rank | eukaryota | plants | species | 429571 | click here |
| bunyamwera orthobunyavirus | Yes | species | | | species | 1933179 | click here |
| bunyamwera virus | Yes | species | viruses and viroids | viruses | species | 35304 | click here |
| bussuquara virus | Yes | no rank | viruses and viroids | viruses | no rank | 64304 | click here |
| cacipacore virus | Yes | species | viruses and viroids | viruses | species | 64305 | click here |
| controrchis biliophilus | Yes | species | | | species | 1986111 | click here |
| cryptosporidium parvum | Yes | species | eukaryota | invertebrates | species | 5807 | click here |
| cuterebra baeri | No | species | eukaryota | invertebrates | species | 204914 | click here |
| cuterebra baeri | Yes | species | eukaryota | invertebrates | species | 204914 | click here |
| dengue virus | Yes | species | viruses and viroids | viruses | species | 12637 | click here |
| endolimax nana | Yes | species | eukaryota | invertebrates | species | 110788 | click here |
| entamoeba coli | Yes | species | eukaryota | invertebrates | species | 110766 | click here |
| escherichia coli | Yes | species | bacteria | bacteria | species | 562 | click here |
| giardia intestinalis | Yes | species | eukaryota | invertebrates | species | 5741 | click here |
| haemagogus janthinomys | Yes | species | | | species | 1677689 | click here |
| haemagogus leucocelaenus | Yes | species | | | species | 1170321 | click here |
| hepatovirus a | Yes | species | viruses and viroids | viruses | species | 12092 | click here |
| howler monkey adenovirus 1 | Yes | species | | | species | 2358482 | click here |
| human bocavirus 3 | Yes | species | viruses and viroids | viruses | species | 638313 | click here |
| human herpesvirus 1 | Yes | species | viruses and viroids | viruses | species | 10298 | click here |
| human parvovirus 4 | Yes | species | viruses and viroids | viruses | species | 289365 | click here |
| human parvovirus b19 | Yes | species | viruses and viroids | viruses | species | 10798 | click here |
| ilheus virus | Yes | species | viruses and viroids | viruses | species | 59563 | click here |
| klebsiella pneumoniae | Yes | species | bacteria | bacteria | species | 573 | click here |
| lactobacillus reuteri | Yes | species | bacteria | bacteria | species | 1598 | click here |
| leishmania amazonensis | Yes | species | eukaryota | invertebrates | species | 5659 | click here |
| leishmania braziliensis | Yes | species | eukaryota | invertebrates | species | 5660 | click here |
| leishmania guyanensis | Yes | species | eukaryota | invertebrates | species | 5670 | click here |
| leishmania infantum | Yes | species | eukaryota | invertebrates | species | 5671 | click here |
| leishmania mexicana | Yes | species | eukaryota | invertebrates | species | 5665 | click here |
| leptospira interrogans | Yes | species | bacteria | bacteria | species | 173 | click here |
| maguari virus | Yes | no rank | viruses and viroids | viruses | no rank | 11575 | click here |
| mansonella atelensis | Yes | species | eukaryota | invertebrates | species | 459503 | click here |
| mansonella perstans | Yes | species | eukaryota | invertebrates | species | 42231 | click here |
| manzanilla virus | Yes | species | viruses and viroids | viruses | species | 159139 | click here |
| mayaro virus | Yes | species | viruses and viroids | viruses | species | 59301 | click here |
| monkeypox virus | Yes | species | viruses and viroids | viruses | species | 10244 | click here |
| ochlerotatus scapularis | Yes | species | eukaryota | invertebrates | species | 571210 | click here |
| pediculus mjobergi | Yes | species | | | species | 1628326 | click here |
| plasmodium brasilianum | Yes | species | eukaryota | invertebrates | species | 5824 | click here |
| plasmodium falciparum | Yes | species | eukaryota | invertebrates | species | 5833 | click here |
| plasmodium malariae | Yes | species | eukaryota | invertebrates | species | 5858 | click here |
| plasmodium simium | Yes | species | eukaryota | invertebrates | species | 5859 | click here |
| pneumocystis carinii | Yes | species | eukaryota | plants | species | 4754 | click here |
| psorophora ferox | Yes | species | eukaryota | invertebrates | species | 7183 | click here |
| sabethes albiprivus | Yes | species | eukaryota | invertebrates | species | 518694 | click here |
| saimiriine herpesvirus 2 | Yes | species | viruses and viroids | viruses | species | 10381 | click here |
| salmonella enterica subsp. enterica serovar typhimurium | Yes | no rank | bacteria | bacteria | no rank | 90371 | click here |
| simian foamy virus | Yes | species | viruses and viroids | viruses | species | 11642 | click here |
| st. louis encephalitis virus | No | species | viruses and viroids | viruses | species | 11080 | click here |
| st. louis encephalitis virus | Yes | species | viruses and viroids | viruses | species | 11080 | click here |
| tetratrichomonas sp. | Yes | species | | | species | 1851209 | click here |
| toxascaris leonina | Yes | species | eukaryota | invertebrates | species | 59264 | click here |
| toxocara cati | Yes | species | eukaryota | invertebrates | species | 6266 | click here |
| toxoplasma gondii | Yes | species | eukaryota | invertebrates | species | 5811 | click here |
| trypanosoma cruzi | Yes | species | eukaryota | invertebrates | species | 5693 | click here |
| trypanosoma lewisi | Yes | species | eukaryota | invertebrates | species | 5695 | click here |
| trypanosoma minasense | Yes | species | eukaryota | invertebrates | species | 83893 | click here |
| trypanosoma rangeli | Yes | species | eukaryota | invertebrates | species | 5698 | click here |
| trypanoxyuris minutus | Yes | species | | invertebrates | species | 1630202 | click here |
| trypanoxyuris multilabiatus | Yes | species | | | species | 1859124 | click here |
| trypanoxyuris pigrae | Yes | species | | | species | 1859125 | click here |
| una virus | Yes | species | viruses and viroids | viruses | species | 59304 | click here |
| uncultured mycoplasma sp. | No | no rank | bacteria | environmental samples | species | 167967 | click here |
| uncultured mycoplasma sp. | Yes | no rank | bacteria | environmental samples | species | 167967 | click here |
| uncultured pseudomonas sp. | Yes | no rank | bacteria | environmental samples | species | 114707 | click here |
| vaccinia virus | Yes | species | viruses and viroids | viruses | species | 10245 | click here |
| vesicular stomatitis indiana virus | Yes | species | viruses and viroids | viruses | species | 11277 | click here |
| west nile virus | Yes | species | viruses and viroids | viruses | species | 11082 | click here |
| yellow fever virus | No | species | viruses and viroids | viruses | species | 11089 | click here |
| yellow fever virus | Yes | species | viruses and viroids | viruses | species | 11089 | click here |
| zika virus | Yes | species | viruses and viroids | viruses | species | 64320 | click here |