| amblyomma auricularium | Yes | species | eukaryota | invertebrates | species | 251377 | click here |
| amblyomma parvum | Yes | species | eukaryota | invertebrates | species | 251391 | click here |
| amblyomma sp. ibsp 7118 | Yes | no rank | eukaryota | invertebrates | species | 251409 | click here |
| angiostrongylus cantonensis | Yes | species | eukaryota | invertebrates | species | 6313 | click here |
| aspidodera binansata | Yes | species | | | species | 1097584 | click here |
| aspidodera scoleciformis | Yes | species | | | species | 1097586 | click here |
| aspidodera sogandaresi | Yes | species | | | species | 1097587 | click here |
| aspidodera sp. costarica | Yes | no rank | | | species | 1286777 | click here |
| aspidodera sp. het021 | Yes | no rank | | | species | 1297160 | click here |
| aspidodera sp. het023 | Yes | no rank | | | species | 1297159 | click here |
| aspidodera sp. het165 | Yes | no rank | | | species | 1297158 | click here |
| aspidodera sp. mex003a | Yes | no rank | | | species | 1097589 | click here |
| aspidodera sp. mex003b | Yes | no rank | | | species | 1097590 | click here |
| aspidodera sp. np319 | Yes | no rank | | | species | 1097591 | click here |
| aspidodera sp. san-2007 | Yes | no rank | eukaryota | invertebrates | species | 435733 | click here |
| aspidodera vazi | Yes | species | | | species | 2025947 | click here |
| brucella suis | Yes | species | bacteria | bacteria | species | 29461 | click here |
| coccidioides immitis | Yes | species | eukaryota | plants | species | 5501 | click here |
| cryptococcus neoformans | Yes | species | eukaryota | plants | species | 5207 | click here |
| dirofilaria immitis | Yes | species | eukaryota | invertebrates | species | 6287 | click here |
| eastern equine encephalitis virus | Yes | species | viruses and viroids | viruses | species | 11021 | click here |
| ehrlichia canis | Yes | species | bacteria | bacteria | species | 944 | click here |
| environmental samples | Yes | | | environmental samples | no rank | 333811 | click here |
| environmental samples | Yes | | | environmental samples | no rank | 359183 | click here |
| environmental samples | Yes | | | | no rank | 1629145 | click here |
| escherichia coli | No | species | bacteria | bacteria | species | 562 | click here |
| escherichia coli | Yes | species | bacteria | bacteria | species | 562 | click here |
| histoplasma capsulatum | Yes | species | eukaryota | plants | species | 5037 | click here |
| human picobirnavirus | Yes | species | viruses and viroids | viruses | species | 145856 | click here |
| lauroia bolivari | Yes | species | | | species | 1097593 | click here |
| lauroia trinidadensis | Yes | species | | | species | 1097594 | click here |
| leishmania naiffi | Yes | species | eukaryota | invertebrates | species | 5678 | click here |
| leptospira biflexa | Yes | species | bacteria | bacteria | species | 172 | click here |
| leptospira interrogans | Yes | species | bacteria | bacteria | species | 173 | click here |
| leptospira noguchii serovar louisiana | No | no rank | bacteria | bacteria | no rank | 400205 | click here |
| macracanthorhynchus ingens | Yes | species | eukaryota | invertebrates | species | 60534 | click here |
| mayaro virus | Yes | species | viruses and viroids | viruses | species | 59301 | click here |
| mycobacterium avium-intracellulare | Yes | no rank | bacteria | bacteria | species | 55883 | click here |
| mycobacterium leprae | Yes | species | bacteria | bacteria | species | 1769 | click here |
| mycobacterium ulcerans | Yes | species | bacteria | bacteria | species | 1809 | click here |
| oncicola campanulatus | Yes | species | | | species | | click here |
| paracoccidioides brasiliensis | Yes | species | eukaryota | plants | species | 121759 | click here |
| purpureocillium lilacinum | Yes | species | eukaryota | plants | species | 33203 | click here |
| rabies virus | Yes | species | viruses and viroids | viruses | species | 11292 | click here |
| rickettsia amblyommatis | Yes | species | bacteria | bacteria | species | 33989 | click here |
| salmonella enterica subsp. enterica serovar muenchen | Yes | no rank | bacteria | bacteria | no rank | 596 | click here |
| salmonella enterica subsp. enterica serovar newport | Yes | no rank | bacteria | bacteria | no rank | 108619 | click here |
| sarcocystis dasypi | Yes | species | eukaryota | invertebrates | species | 190329 | click here |
| sarcocystis neurona | Yes | species | eukaryota | invertebrates | species | 42890 | click here |
| spirometra mansonoides | Yes | species | eukaryota | invertebrates | species | 46899 | click here |
| sporothrix schenckii | Yes | species | eukaryota | plants | species | 29908 | click here |
| st. louis encephalitis virus | Yes | species | viruses and viroids | viruses | species | 11080 | click here |
| staphylococcus sciuri | Yes | species | bacteria | bacteria | species | 1296 | click here |
| taenia omissa | Yes | species | | | species | 1256673 | click here |
| theileria sp. | Yes | species | eukaryota | invertebrates | species | 27992 | click here |
| toxoplasma gondii | Yes | species | eukaryota | invertebrates | species | 5811 | click here |
| trypanosoma cruzi | Yes | species | eukaryota | invertebrates | species | 5693 | click here |
| uncultured bacterium | Yes | no rank | bacteria | environmental samples | species | 77133 | click here |
| uncultured bartonella sp. | Yes | no rank | bacteria | environmental samples | species | 104108 | click here |
| uncultured mycoplasma sp. | Yes | no rank | bacteria | environmental samples | species | 167967 | click here |
| uncultured onygenales | Yes | no rank | eukaryota | environmental samples | species | 227717 | click here |
| venezuelan equine encephalitis virus | Yes | species | viruses and viroids | viruses | species | 11036 | click here |
| vesicular stomatitis indiana virus | Yes | species | viruses and viroids | viruses | species | 11277 | click here |