| aedes aegypti | Yes | species | eukaryota | invertebrates | species | 7159 | click here |
| ascaridia galli | Yes | species | eukaryota | invertebrates | species | 46685 | click here |
| aspergillus flavus | Yes | species | eukaryota | plants | species | 5059 | click here |
| aspergillus niger | Yes | species | eukaryota | plants | species | 5061 | click here |
| avian coronavirus | Yes | species | viruses and viroids | viruses | species | 694014 | click here |
| avian orthoavulavirus 1 | Yes | species | | | species | 2560319 | click here |
| avipoxvirus isolate hungary | Yes | species | | | species | 1294100 | click here |
| avipoxvirus sp. | Yes | species | | | species | 1928336 | click here |
| blastocystis hominis | Yes | species | eukaryota | plants | species | 12968 | click here |
| blastocystis sp. | Yes | species | eukaryota | plants | species | 46767 | click here |
| brachyspira innocens | Yes | species | bacteria | bacteria | species | 13264 | click here |
| cress virus sp. | Yes | species | | | species | 2202563 | click here |
| cryptococcus neoformans | Yes | species | eukaryota | plants | species | 5207 | click here |
| cryptosporidium sp. d38 | Yes | no rank | eukaryota | invertebrates | species | 657361 | click here |
| culex pipiens | Yes | species | eukaryota | invertebrates | species | 7175 | click here |
| culex pipiens pipiens | Yes | subspecies | eukaryota | invertebrates | subspecies | 38569 | click here |
| culex quinquefasciatus | Yes | species | eukaryota | invertebrates | species | 7176 | click here |
| culex tarsalis | Yes | species | eukaryota | invertebrates | species | 7177 | click here |
| eimeria mandali | Yes | species | | | species | | click here |
| eimeria mayurai | Yes | species | | | species | | click here |
| eimeria pavonina | Yes | species | | | species | 1141916 | click here |
| eimeria pavonis | Yes | species | | | species | | click here |
| eimeria tenella | Yes | species | eukaryota | invertebrates | species | 5802 | click here |
| enterococcus hirae | Yes | species | bacteria | bacteria | species | 1354 | click here |
| enterocytozoon bieneusi | No | species | eukaryota | plants | species | 31281 | click here |
| enterocytozoon bieneusi | Yes | species | eukaryota | plants | species | 31281 | click here |
| environmental samples | Yes | | | environmental samples | no rank | 333811 | click here |
| environmental samples | Yes | | | environmental samples | no rank | 359183 | click here |
| environmental samples | Yes | | | | no rank | 1629145 | click here |
| escherichia coli | Yes | species | bacteria | bacteria | species | 562 | click here |
| fowlpox virus | Yes | species | viruses and viroids | viruses | species | 10261 | click here |
| gallid herpesvirus 1 | Yes | species | viruses and viroids | viruses | species | 10386 | click here |
| gallid herpesvirus 2 | Yes | species | viruses and viroids | viruses | species | 10390 | click here |
| h5n1 subtype | Yes | no rank | viruses and viroids | viruses | no rank | 102793 | click here |
| h6n2 subtype | Yes | no rank | viruses and viroids | viruses | no rank | 119213 | click here |
| heterakis gallinarum | Yes | species | eukaryota | invertebrates | species | 65465 | click here |
| heterakis pavonis | Yes | species | | | species | | click here |
| histomonas meleagridis | Yes | species | eukaryota | invertebrates | species | 135588 | click here |
| infectious bronchitis virus | Yes | no rank | viruses and viroids | viruses | no rank | 11120 | click here |
| influenza a virus | Yes | species | viruses and viroids | viruses | species | 11320 | click here |
| influenza a virus (a/indian peafowl/cameroon/17rs1661-6/2017(h5n8)) | Yes | no rank | | | no rank | 2058856 | click here |
| influenza a virus (a/pavo cristatus/jiangxi/ja1/2016(h5n6)) | Yes | no rank | | | no rank | 1841904 | click here |
| influenza a virus (a/peacock/belgium/1017/2017(h5n8)) | Yes | no rank | | | no rank | 1986416 | click here |
| leuconostoc mesenteroides subsp. mesenteroides | Yes | subspecies | bacteria | bacteria | subspecies | 33967 | click here |
| lipeurus caponis | Yes | species | eukaryota | invertebrates | species | 236522 | click here |
| megninia phasiani | Yes | species | | | species | | click here |
| menopon phaestomum | Yes | species | | | species | | click here |
| menopon stramineus | Yes | species | | | species | | click here |
| mycobacterium avium | Yes | species | bacteria | bacteria | species | 1764 | click here |
| mycoplasma gallisepticum | Yes | species | bacteria | bacteria | species | 2096 | click here |
| mycoplasma meleagridis | Yes | species | bacteria | bacteria | species | 29561 | click here |
| mycoplasma synoviae | Yes | species | bacteria | bacteria | species | 2109 | click here |
| oxyspirura mansoni | Yes | species | | | species | | click here |
| paratanaisia bragai | Yes | species | | | species | 1308820 | click here |
| parvoviridae sp. | Yes | species | | | species | 1940570 | click here |
| peafowl parvovirus 1 | Yes | species | | | species | 2668086 | click here |
| peafowl parvovirus 2 | Yes | species | | | species | 2668087 | click here |
| picobirnavirus sp. | Yes | species | | | species | 1907787 | click here |
| picornavirales sp. | Yes | species | | | species | 1955153 | click here |
| picornaviridae sp. | Yes | species | | | species | 1530251 | click here |
| pigeon circovirus | Yes | species | | viruses | species | 1414603 | click here |
| plasmodium gallinaceum | Yes | species | eukaryota | invertebrates | species | 5849 | click here |
| pseudaspidodera jnanendre | Yes | species | | | species | | click here |
| pseudaspidodera pavonis | Yes | species | | | species | | click here |
| reticuloendotheliosis virus | Yes | species | viruses and viroids | viruses | species | 11636 | click here |
| riboviria sp. | Yes | species | | | species | 2585031 | click here |
| salmonella enterica subsp. enterica serovar pullorum | Yes | no rank | bacteria | bacteria | no rank | 605 | click here |
| salmonella enterica subsp. enterica serovar typhimurium | Yes | no rank | bacteria | bacteria | no rank | 90371 | click here |
| serratia marcescens | Yes | species | bacteria | bacteria | species | 615 | click here |
| smacoviridae sp. | Yes | species | | | species | 2715094 | click here |
| syringophilus uncinatus | Yes | species | | | species | | click here |
| toxoplasma gondii | Yes | species | eukaryota | invertebrates | species | 5811 | click here |
| usutu virus | Yes | species | viruses and viroids | viruses | species | 64286 | click here |