| acinetobacter baumannii | Yes | species | bacteria | bacteria | species | 470 | click here |
| acinetobacter sp. logew2-3 | Yes | no rank | | | species | 1808001 | click here |
| aequorivita sp. h23m31 | Yes | no rank | | | species | 2494375 | click here |
| aspergillus fumigatus | Yes | species | eukaryota | plants | species | 746128 | click here |
| aspergillus niger | Yes | species | eukaryota | plants | species | 5061 | click here |
| avian hepatitis e virus | Yes | no rank | viruses and viroids | viruses | no rank | 172851 | click here |
| avian orthoavulavirus 1 | Yes | species | | | species | 2560319 | click here |
| avian orthoreovirus | Yes | species | viruses and viroids | viruses | species | 38170 | click here |
| bordetella sp. 02p26c-1 | Yes | no rank | | | species | 2683195 | click here |
| bordetella sp. 15p40c-2 | Yes | no rank | | | species | 2572246 | click here |
| campylobacter coli | Yes | species | bacteria | bacteria | species | 195 | click here |
| campylobacter jejuni | Yes | species | bacteria | bacteria | species | 197 | click here |
| cathaemasia hians | Yes | species | eukaryota | invertebrates | species | 296293 | click here |
| chaunocephalus ferox | Yes | species | | | species | 1718590 | click here |
| chlamydia abortus | Yes | species | bacteria | bacteria | species | 83555 | click here |
| chlamydia psittaci | Yes | species | bacteria | bacteria | species | 83554 | click here |
| ciconiid herpesvirus 1 | Yes | species | | | species | 2605648 | click here |
| clostridium botulinum d/c | Yes | no rank | | | no rank | 1573941 | click here |
| contracaecum microcephalum | Yes | species | eukaryota | invertebrates | species | 142968 | click here |
| corynebacterium ciconiae dsm 44920 | Yes | no rank | | | no rank | 1121356 | click here |
| corynebacterium pelargi | Yes | species | | | species | 1471400 | click here |
| corynebacterium trachiae | Yes | species | | | species | 1471401 | click here |
| echinostoma revolutum | Yes | species | eukaryota | invertebrates | species | 48217 | click here |
| erysipelothrix rhusiopathiae | Yes | species | bacteria | bacteria | species | 1648 | click here |
| escherichia coli | Yes | species | bacteria | bacteria | species | 562 | click here |
| giardia ardeae | Yes | species | eukaryota | invertebrates | species | 5743 | click here |
| goose circovirus | Yes | species | viruses and viroids | viruses | species | 146032 | click here |
| goose hemorrhagic polyomavirus | Yes | no rank | viruses and viroids | viruses | no rank | 208491 | click here |
| goose polyomavirus | Yes | no rank | viruses and viroids | viruses | no rank | 123358 | click here |
| h11n9 subtype | Yes | no rank | viruses and viroids | viruses | no rank | 129772 | click here |
| h5n1 subtype | Yes | no rank | viruses and viroids | viruses | no rank | 102793 | click here |
| h5n2 subtype | Yes | no rank | viruses and viroids | viruses | no rank | 119220 | click here |
| haemoproteus sp. cmv-2012 | Yes | no rank | | | species | 1227936 | click here |
| hovorkonema variegatum | Yes | species | eukaryota | invertebrates | species | 291935 | click here |
| influenza a virus | Yes | species | viruses and viroids | viruses | species | 11320 | click here |
| influenza a virus (a/marabou stork/cambodia/tm068/2011(h5n1)) | Yes | no rank | | | no rank | 1154989 | click here |
| influenza a virus (a/openbill stork/thailand/vsmu-12-bkk/2003(h5n1)) | No | no rank | viruses and viroids | viruses | no rank | 863215 | click here |
| influenza a virus (a/openbill stork/thailand/vsmu-4-nsn/2004(h5n1)) | No | no rank | viruses and viroids | viruses | no rank | 861388 | click here |
| influenza a virus (a/openbill stork/thailand/vsmu-5-nsn/2004(h5n1)) | No | no rank | viruses and viroids | viruses | no rank | 861389 | click here |
| influenza a virus (a/openbill stork/thailand/vsmu-6-bkk/2004(h5n1)) | No | no rank | viruses and viroids | viruses | no rank | 861390 | click here |
| influenza a virus (a/openbill stork/thailand/vsmu-8-bkk/2004(h5n1)) | No | no rank | viruses and viroids | viruses | no rank | 861391 | click here |
| influenza a virus (a/oriental white stork/zhalong/183/2006(h11n9)) | Yes | no rank | | | no rank | 2050412 | click here |
| influenza a virus (a/white stork/spain/08.00991.7/2006(h11n9)) | Yes | no rank | viruses and viroids | viruses | no rank | 702558 | click here |
| lichtheimia corymbifera | Yes | species | eukaryota | plants | species | 42458 | click here |
| mycoplasma ciconiae | Yes | species | bacteria | bacteria | species | 561067 | click here |
| mycoplasma sp. | Yes | species | bacteria | bacteria | species | 2108 | click here |
| mycoplasma sp. 1566-2012 | Yes | no rank | | | species | 1650674 | click here |
| mycoplasma sp. sp22 | Yes | no rank | bacteria | bacteria | species | 645422 | click here |
| mycoplasma sp. st 101 | Yes | no rank | bacteria | bacteria | species | 561066 | click here |
| mycoplasma sp. st 102-2 | Yes | no rank | | | species | 1774929 | click here |
| mycoplasma sp. st 24-2 | Yes | no rank | | | species | 1774930 | click here |
| mycoplasma sp. st 26-1 | Yes | no rank | | | species | 1774931 | click here |
| mycoplasma sp. st 39-2 | Yes | no rank | | | species | 1774932 | click here |
| mycoplasma sp. st 56-2 | Yes | no rank | | | species | 1774933 | click here |
| mycoplasma sp. st 71-1 | Yes | no rank | | | species | 1774934 | click here |
| mycoplasma sturni | Yes | species | bacteria | bacteria | species | 39047 | click here |
| planococcaceae bacterium storch 2/2-2 | Yes | no rank | | | species | 1907194 | click here |
| plasmodium sp. | Yes | species | eukaryota | invertebrates | species | 31272 | click here |
| plasmodium sp. cmv-2012 | Yes | no rank | | | species | 1227937 | click here |
| psychrobacter ciconiae | Yes | species | | | species | 1553449 | click here |
| rhizopus microsporus | Yes | species | eukaryota | plants | species | 58291 | click here |
| rhizopus oryzae | Yes | species | eukaryota | plants | species | 64495 | click here |
| salmonella enterica | Yes | species | bacteria | bacteria | species | 28901 | click here |
| salmonella enterica subsp. enterica serovar enteritidis | Yes | no rank | bacteria | bacteria | no rank | 149539 | click here |
| salmonella enterica subsp. enterica serovar typhimurium | Yes | no rank | bacteria | bacteria | no rank | 90371 | click here |
| schistocephalus solidus | Yes | species | eukaryota | invertebrates | species | 70667 | click here |
| staphylococcus aureus | Yes | species | bacteria | bacteria | species | 1280 | click here |
| stork hepatitis b virus | Yes | no rank | viruses and viroids | viruses | no rank | 110944 | click here |
| syngamus trachea | Yes | species | eukaryota | invertebrates | species | 70241 | click here |
| thermomyces lanuginosus | Yes | species | eukaryota | plants | species | 5541 | click here |
| toxoplasma gondii | Yes | species | eukaryota | invertebrates | species | 5811 | click here |
| tylodelphys excavata | Yes | species | | | species | 1301050 | click here |
| uncultured chlamydia sp. | Yes | no rank | bacteria | environmental samples | species | 199738 | click here |
| uncultured mycoplasma sp. | Yes | no rank | bacteria | environmental samples | species | 167967 | click here |
| usutu virus | Yes | species | viruses and viroids | viruses | species | 64286 | click here |
| west nile virus | No | species | viruses and viroids | viruses | species | 11082 | click here |
| west nile virus | Yes | species | viruses and viroids | viruses | species | 11082 | click here |