| acidoproctus emersoni | Yes | species | eukaryota | invertebrates | species | 209916 | click here |
| acinetobacter baumannii | Yes | species | bacteria | bacteria | species | 470 | click here |
| avian coronavirus | Yes | species | viruses and viroids | viruses | species | 694014 | click here |
| avian metapneumovirus | Yes | species | viruses and viroids | viruses | species | 38525 | click here |
| avian orthoavulavirus 1 | Yes | species | | | species | 2560319 | click here |
| capillaria anatis | Yes | species | | | species | 1647939 | click here |
| cryptococcus neoformans | Yes | species | eukaryota | plants | species | 5207 | click here |
| escherichia coli | Yes | species | bacteria | bacteria | species | 562 | click here |
| h5n1 subtype | Yes | no rank | viruses and viroids | viruses | no rank | 102793 | click here |
| h6n2 subtype | Yes | no rank | viruses and viroids | viruses | no rank | 119213 | click here |
| haemoproteus macrovacuolatus | Yes | species | | | species | 1494460 | click here |
| haemoproteus sp. c033 | Yes | no rank | eukaryota | invertebrates | species | 352891 | click here |
| influenza a virus | Yes | species | viruses and viroids | viruses | species | 11320 | click here |
| influenza a virus (a/black bellied whistling duck/colombia/1/2011(h5n2)) | Yes | no rank | | | no rank | 1299908 | click here |
| influenza a virus (a/dendrocygna viduata/germany/r2484/2007(h3n8)) | Yes | no rank | viruses and viroids | viruses | no rank | 489888 | click here |
| influenza a virus (a/lesser whistling-duck/thailand/cu-w3941/2010(h12n1)) | Yes | no rank | | | no rank | 1109105 | click here |
| influenza a virus (a/lesser whistling-duck/thailand/cu-w3946/2010(h12n1)) | Yes | no rank | | | no rank | 1109106 | click here |
| influenza a virus (a/lesser whistling-duck/thailand/cu-w3947/2010(h12n1)) | Yes | no rank | | | no rank | 1109107 | click here |
| influenza a virus (a/white faced whistling duck/colombia/1/2011(h5n2)) | Yes | no rank | | | no rank | 1299909 | click here |
| influenza a virus (a/white-faced whistling duck/nigeria/3927-1/2007(h5n2)) | Yes | no rank | viruses and viroids | viruses | no rank | 529933 | click here |
| klebsiella variicola | Yes | species | bacteria | bacteria | species | 244366 | click here |
| mycobacterium avium | Yes | species | bacteria | bacteria | species | 1764 | click here |
| plasmodium elongatum | Yes | species | eukaryota | invertebrates | species | 77517 | click here |
| plasmodium sp. c028 | Yes | no rank | eukaryota | invertebrates | species | 352893 | click here |
| plasmodium sp. denvid01 | Yes | no rank | | | species | 1774576 | click here |
| plasmodium sp. mms-2015 | Yes | no rank | | | species | 1596007 | click here |
| sarcocystis rileyi | Yes | species | eukaryota | invertebrates | species | 805401 | click here |
| trinoton fluviatale | Yes | species | eukaryota | invertebrates | species | 297934 | click here |
| usutu virus | Yes | species | viruses and viroids | viruses | species | 64286 | click here |
| west nile virus | Yes | species | viruses and viroids | viruses | species | 11082 | click here |