| acanthocheilonema reconditum | Yes | species | eukaryota | invertebrates | species | 114234 | click here |
| anaplasma ovis | Yes | species | bacteria | bacteria | species | 142058 | click here |
| anaplasma phagocytophilum | Yes | species | bacteria | bacteria | species | 948 | click here |
| babesia annae | Yes | species | eukaryota | invertebrates | species | 1811913 | click here |
| babesia canis | Yes | species | eukaryota | invertebrates | species | 5867 | click here |
| babesia canis vogeli | Yes | subspecies | eukaryota | invertebrates | subspecies | 167445 | click here |
| babesia microti | Yes | species | eukaryota | invertebrates | species | 5868 | click here |
| bartonella alsatica | Yes | species | bacteria | bacteria | species | 52764 | click here |
| bartonella bacilliformis | Yes | species | bacteria | bacteria | species | 774 | click here |
| bartonella bovis | Yes | species | bacteria | bacteria | species | 155194 | click here |
| bartonella chomelii | Yes | species | bacteria | bacteria | species | 236402 | click here |
| bartonella clarridgeiae | Yes | species | bacteria | bacteria | species | 56426 | click here |
| bartonella elizabethae | Yes | species | bacteria | bacteria | species | 807 | click here |
| bartonella grahamii | Yes | species | bacteria | bacteria | species | 33045 | click here |
| bartonella henselae | Yes | species | bacteria | bacteria | species | 38323 | click here |
| bartonella japonica | Yes | species | bacteria | bacteria | species | 357761 | click here |
| bartonella koehlerae | Yes | species | bacteria | bacteria | species | 92181 | click here |
| bartonella phoceensis | Yes | species | bacteria | bacteria | species | 270249 | click here |
| bartonella queenslandensis | Yes | species | bacteria | bacteria | species | 481138 | click here |
| bartonella quintana | Yes | species | bacteria | bacteria | species | 803 | click here |
| bartonella rochalimae | Yes | species | bacteria | bacteria | species | 395923 | click here |
| bartonella sp. | Yes | species | bacteria | bacteria | species | 46358 | click here |
| bartonella sp. ctf4yn | Yes | no rank | bacteria | bacteria | species | 267685 | click here |
| bartonella sp. 'elk-1' | Yes | no rank | bacteria | bacteria | species | 122269 | click here |
| bartonella sp. pi1h | Yes | no rank | bacteria | bacteria | species | 386512 | click here |
| bartonella sp. rr002-1e | Yes | no rank | bacteria | bacteria | species | 322677 | click here |
| bartonella sp. rr0042-1e | Yes | no rank | bacteria | bacteria | species | 322668 | click here |
| bartonella sp. rr184-1xb | Yes | no rank | | | species | 1225546 | click here |
| bartonella sp. se-bart-a | Yes | no rank | bacteria | bacteria | species | 341820 | click here |
| bartonella sp. se-bart-b | Yes | no rank | bacteria | bacteria | species | 341821 | click here |
| bartonella sp. se-bart-c | Yes | no rank | bacteria | bacteria | species | 341822 | click here |
| bartonella sp. se-bart-d | Yes | no rank | bacteria | bacteria | species | 341823 | click here |
| bartonella tamiae | Yes | species | bacteria | bacteria | species | 373638 | click here |
| bartonella taylorii | Yes | species | bacteria | bacteria | species | 33046 | click here |
| bartonella tribocorum | Yes | species | bacteria | bacteria | species | 85701 | click here |
| bartonella vinsonii | Yes | species | bacteria | bacteria | species | 33047 | click here |
| bartonella washoensis | Yes | species | bacteria | bacteria | species | 186739 | click here |
| blechomonas campbelli | Yes | species | | | species | 1463232 | click here |
| blechomonas lauriereadi | Yes | species | | | species | 1463345 | click here |
| blechomonas pulexsimulantis | Yes | species | | | species | 1463354 | click here |
| blechomonas sp. e1b | Yes | no rank | | | species | 1463348 | click here |
| borrelia recurrentis | Yes | species | bacteria | bacteria | species | 44449 | click here |
| candidatus mycoplasma haemobos | Yes | species | bacteria | bacteria | species | 432608 | click here |
| candidatus mycoplasma haemominutum | Yes | species | bacteria | bacteria | species | 209446 | click here |
| candidatus rickettsia andeanae | Yes | subspecies | bacteria | bacteria | species | 273247 | click here |
| candidatus rickettsia senegalensis | Yes | species | | | species | 1436799 | click here |
| coxiella burnetii | Yes | species | bacteria | bacteria | species | 777 | click here |
| coxiella sp. se467 | Yes | no rank | bacteria | bacteria | species | 342114 | click here |
| ctenocephalides felis | Yes | species | eukaryota | invertebrates | species | 7515 | click here |
| dengue virus | Yes | species | viruses and viroids | viruses | species | 12637 | click here |
| dipetalonema gracile | Yes | species | eukaryota | invertebrates | species | 221945 | click here |
| dipetalonema reconditum | Yes | species | | | species | | click here |
| dipylidium caninum | Yes | species | eukaryota | invertebrates | species | 66787 | click here |
| dipylidium sexcoronatum | Yes | species | | | species | | click here |
| dipylidium sp. umtidrecf42 | Yes | no rank | | | species | 1967475 | click here |
| dirofilaria immitis | Yes | species | eukaryota | invertebrates | species | 6287 | click here |
| dirofilaria repens | Yes | species | eukaryota | invertebrates | species | 31241 | click here |
| ehrlichia canis | Yes | species | bacteria | bacteria | species | 944 | click here |
| feline leukemia virus | Yes | species | viruses and viroids | viruses | species | 11768 | click here |
| francisella tularensis | Yes | species | bacteria | bacteria | species | 263 | click here |
| gregarina ctenocephali | Yes | species | eukaryota | invertebrates | species | 909203 | click here |
| hepatozoon felis | Yes | species | eukaryota | invertebrates | species | 294745 | click here |
| herpetomonas sp. sc_ukf5 | Yes | no rank | eukaryota | invertebrates | species | 296131 | click here |
| klebsiella pneumoniae | Yes | species | bacteria | bacteria | species | 573 | click here |
| leishmania chagasi | Yes | species | eukaryota | invertebrates | species | 44271 | click here |
| leishmania infantum | Yes | species | eukaryota | invertebrates | species | 5671 | click here |
| leishmania major | Yes | species | eukaryota | invertebrates | species | 5664 | click here |
| leptomonas sp. b08-cte2/b | Yes | no rank | | | species | 1463352 | click here |
| leptotrombidium chiangraiensis | Yes | species | eukaryota | invertebrates | species | 436344 | click here |
| leptotrombidium imphalum | Yes | species | eukaryota | invertebrates | species | 436345 | click here |
| leptotrombidium sp. fn8-chigger | Yes | no rank | | | species | 938134 | click here |
| leptotrombidium sp. ktlfj-chigger | Yes | no rank | | | species | 938137 | click here |
| loa loa | Yes | species | eukaryota | invertebrates | species | 7209 | click here |
| mansonella ozzardi | Yes | species | eukaryota | invertebrates | species | 122354 | click here |
| mycobacterium bovis | Yes | species | bacteria | bacteria | species | 1765 | click here |
| mycoplasma agalactiae | Yes | species | bacteria | bacteria | species | 2110 | click here |
| mycoplasma arginini | Yes | species | bacteria | bacteria | species | 2094 | click here |
| mycoplasma ovipneumoniae | Yes | species | bacteria | bacteria | species | 29562 | click here |
| mycoplasma wenyonii | Yes | species | bacteria | bacteria | species | 65123 | click here |
| myxoma virus | Yes | species | viruses and viroids | viruses | species | 10273 | click here |
| onchocerca volvulus | Yes | species | eukaryota | invertebrates | species | 6282 | click here |
| orientia tsutsugamushi | Yes | species | bacteria | bacteria | species | 784 | click here |
| pantoea agglomerans | Yes | species | bacteria | bacteria | species | 549 | click here |
| plasmodium gallinaceum | Yes | species | eukaryota | invertebrates | species | 5849 | click here |
| rickettsia aeschlimannii | Yes | species | bacteria | bacteria | species | 45262 | click here |
| rickettsia africae | Yes | species | bacteria | bacteria | species | 35788 | click here |
| rickettsia akari | Yes | species | bacteria | bacteria | species | 786 | click here |
| rickettsia amblyommatis | Yes | species | bacteria | bacteria | species | 33989 | click here |
| rickettsia asemboensis | Yes | species | | | species | 1068590 | click here |
| rickettsia australis | Yes | species | bacteria | bacteria | species | 787 | click here |
| rickettsia bellii | Yes | species | bacteria | bacteria | species | 33990 | click here |
| rickettsia conorii | Yes | species | bacteria | bacteria | species | 781 | click here |
| rickettsia endosymbiont of ctenocephalides felis | Yes | species | | | species | 1080087 | click here |
| rickettsia endosymbiont of ctenocephalides orientis | Yes | species | | | species | 1638642 | click here |
| rickettsia endosymbiont of echidnophaga oschanini | Yes | species | | | species | 1983773 | click here |
| rickettsia felis | Yes | species | bacteria | bacteria | species | 42862 | click here |
| rickettsia felis str. lsu | Yes | no rank | | | no rank | 1359195 | click here |
| rickettsia felis str. pedreira | Yes | no rank | | | no rank | 1359196 | click here |
| rickettsia helvetica | Yes | species | bacteria | bacteria | species | 35789 | click here |
| rickettsia honei | Yes | species | bacteria | bacteria | species | 37816 | click here |