| acanthocheilonema reconditum | Yes | species | eukaryota | invertebrates | species | 114234 | click here |
| aeromonas hydrophila | Yes | species | bacteria | bacteria | species | 644 | click here |
| anaplasma bovis | Yes | species | bacteria | bacteria | species | 186733 | click here |
| anaplasma centrale | Yes | species | bacteria | bacteria | species | 769 | click here |
| anaplasma marginale | Yes | species | bacteria | bacteria | species | 770 | click here |
| anaplasma ovis | Yes | species | bacteria | bacteria | species | 142058 | click here |
| anaplasma phagocytophilum | Yes | species | bacteria | bacteria | species | 948 | click here |
| anaplasma platys | Yes | species | bacteria | bacteria | species | 949 | click here |
| anaplasma sp. | Yes | species | bacteria | bacteria | species | 1872535 | click here |
| anaplasma sp. hlj-14 | Yes | no rank | | | species | 1562740 | click here |
| anaplasma sp. 'ivoriense tci149' | Yes | no rank | | | species | 1779475 | click here |
| antioquia tymovirus-like 1 | Yes | species | | | species | 2730578 | click here |
| aspergillus flavus | Yes | species | eukaryota | plants | species | 5059 | click here |
| babesia argentina | Yes | species | | | species | | click here |
| babesia berbera | Yes | species | | | species | | click here |
| babesia bigemina | Yes | species | eukaryota | invertebrates | species | 5866 | click here |
| babesia bovis | Yes | species | eukaryota | invertebrates | species | 5865 | click here |
| babesia caballi | Yes | species | eukaryota | invertebrates | species | 5871 | click here |
| babesia canis | Yes | species | eukaryota | invertebrates | species | 5867 | click here |
| babesia canis vogeli | Yes | subspecies | eukaryota | invertebrates | subspecies | 167445 | click here |
| babesia divergens | Yes | species | eukaryota | invertebrates | species | 32595 | click here |
| babesia gibsoni | Yes | species | eukaryota | invertebrates | species | 33632 | click here |
| babesia major | Yes | species | eukaryota | invertebrates | species | 127461 | click here |
| babesia motasi | Yes | species | eukaryota | invertebrates | species | 237580 | click here |
| babesia occultans | Yes | species | eukaryota | invertebrates | species | 536930 | click here |
| babesia ovis | Yes | species | eukaryota | invertebrates | species | 5869 | click here |
| babesia trautmanni | Yes | species | | invertebrates | species | | click here |
| bacillus amyloliquefaciens | Yes | species | bacteria | bacteria | species | 1390 | click here |
| bacillus sp. mk-t1 | Yes | no rank | | | species | 1078755 | click here |
| bacillus subtilis | Yes | species | bacteria | bacteria | species | 1423 | click here |
| bacterium mk-t4 | Yes | no rank | | | species | 1078620 | click here |
| bacterium mk-t5 | Yes | no rank | | | species | 1078621 | click here |
| bartonella bovis | Yes | species | bacteria | bacteria | species | 155194 | click here |
| bartonella chomelii | Yes | species | bacteria | bacteria | species | 236402 | click here |
| bartonella clarridgeiae | Yes | species | bacteria | bacteria | species | 56426 | click here |
| bartonella henselae | Yes | species | bacteria | bacteria | species | 38323 | click here |
| bartonella sp. | Yes | species | bacteria | bacteria | species | 46358 | click here |
| bartonella sp. bm51yn | Yes | no rank | bacteria | bacteria | species | 261537 | click here |
| bartonella tribocorum | Yes | species | bacteria | bacteria | species | 85701 | click here |
| bhanja virus | Yes | species | | | species | 1213620 | click here |
| bole tick virus 4 | Yes | species | | | species | 1746058 | click here |
| borrelia anserina | Yes | species | bacteria | bacteria | species | 143 | click here |
| borrelia coriaceae | Yes | species | bacteria | bacteria | species | 144 | click here |
| borrelia miyamotoi | Yes | species | bacteria | bacteria | species | 47466 | click here |
| borrelia sp. 'tci301' | Yes | no rank | | | species | 1779478 | click here |
| borrelia theileri | Yes | species | bacteria | bacteria | species | 43082 | click here |
| borreliella burgdorferi | Yes | species | bacteria | bacteria | species | 139 | click here |
| borreliella garinii | Yes | species | bacteria | bacteria | species | 29519 | click here |
| bovine hokovirus 2 | Yes | no rank | | | no rank | 1096141 | click here |
| brevibacillus borstelensis | Yes | species | bacteria | bacteria | species | 45462 | click here |
| brugia malayi | Yes | species | eukaryota | invertebrates | species | 6279 | click here |
| candidatus anaplasma boleense | Yes | species | | | species | 1937801 | click here |
| candidatus coxiella mudrowiae | Yes | species | | | species | 2054173 | click here |
| candidatus ehrlichia shimanensis | Yes | subspecies | bacteria | bacteria | species | 179101 | click here |
| candidatus midichloria mitochondrii | Yes | subspecies | bacteria | bacteria | species | 234827 | click here |
| candidatus mycoplasma haemobos | Yes | species | bacteria | bacteria | species | 432608 | click here |
| candidatus rickettsia andeanae | Yes | subspecies | bacteria | bacteria | species | 273247 | click here |
| candidatus rickettsia barbariae | Yes | subspecies | bacteria | bacteria | species | 500466 | click here |
| candidatus rickettsia jingxinensis | Yes | species | | | species | 1903323 | click here |
| candidatus rickettsia principis | Yes | subspecies | bacteria | bacteria | species | 270922 | click here |
| candidatus rickettsia senegalensis | Yes | species | | | species | 1436799 | click here |
| cattle tick tymovirus-like virus 1 | Yes | species | | | species | 2704632 | click here |
| cell fusing agent virus | Yes | species | viruses and viroids | viruses | species | 31658 | click here |
| chlamydia abortus | Yes | species | bacteria | bacteria | species | 83555 | click here |
| colpodella sp. | Yes | species | | | species | 2033693 | click here |
| colpodella tetrahymenae | Yes | species | eukaryota | invertebrates | species | 294749 | click here |
| colpodellidae sp. hep | Yes | no rank | eukaryota | invertebrates | species | 665140 | click here |
| coxiella burnetii | Yes | species | bacteria | bacteria | species | 777 | click here |
| coxiella endosymbiont of rhipicephalus annulatus | Yes | species | | | species | 1656181 | click here |
| coxiella endosymbiont of rhipicephalus australis | Yes | species | | | species | 1656182 | click here |
| coxiella endosymbiont of rhipicephalus decoloratus | Yes | species | | | species | 1656183 | click here |
| coxiella endosymbiont of rhipicephalus geigyi | Yes | species | | | species | 1656185 | click here |
| coxiella endosymbiont of rhipicephalus microplus | Yes | species | | | species | 1656186 | click here |
| coxiella sp. | Yes | species | bacteria | bacteria | species | 59288 | click here |
| coxiella-like endosymbiont | Yes | no rank | | | species | 1592897 | click here |
| crimean-congo hemorrhagic fever orthonairovirus | Yes | species | | | species | 1980519 | click here |
| dabieshan tick virus | Yes | species | | | species | 1608046 | click here |
| dengue virus | Yes | species | viruses and viroids | viruses | species | 12637 | click here |
| dhori virus | Yes | species | viruses and viroids | viruses | species | 11318 | click here |
| dirofilaria immitis | Yes | species | eukaryota | invertebrates | species | 6287 | click here |
| dirofilaria repens | Yes | species | eukaryota | invertebrates | species | 31241 | click here |
| dog feces bidnaparvovirus | Yes | species | | | species | 2713454 | click here |
| dugbe orthonairovirus | Yes | species | | | species | 1980521 | click here |
| ehrlichia canis | Yes | species | bacteria | bacteria | species | 944 | click here |
| ehrlichia chaffeensis | Yes | species | bacteria | bacteria | species | 945 | click here |
| ehrlichia endosymbiont of rhipicephalus microplus | Yes | species | | | species | 1826063 | click here |
| ehrlichia ewingii | Yes | species | bacteria | bacteria | species | 947 | click here |
| ehrlichia minasensis | Yes | species | | | species | 1242993 | click here |
| ehrlichia muris | Yes | species | bacteria | bacteria | species | 35795 | click here |
| ehrlichia ovina | Yes | species | bacteria | bacteria | species | 170541 | click here |
| ehrlichia ruminantium | Yes | species | bacteria | bacteria | species | 779 | click here |
| ehrlichia sp. | Yes | species | bacteria | bacteria | species | 29502 | click here |
| ehrlichia sp. fujian | Yes | no rank | bacteria | bacteria | species | 364160 | click here |
| ehrlichia sp. lct20 | Yes | no rank | | | species | 1471291 | click here |
| ehrlichia sp. rbd1m | Yes | no rank | | | species | 1436737 | click here |
| ehrlichia sp. 'rustica tci141' | Yes | no rank | | | species | 1779482 | click here |
| ehrlichia sp. 'rustica tci145' | Yes | no rank | | | species | 1779483 | click here |
| ehrlichia sp. 'rustica tci238' | Yes | no rank | | | species | 1779485 | click here |
| ehrlichia sp. 'urmitei tci148' | Yes | no rank | | | species | 1779488 | click here |
| ehrlichia sp. xh-27 | Yes | no rank | | | species | 1769228 | click here |