| acanthamoeba polyphaga mimivirus | Yes | species | viruses and viroids | viruses | species | 212035 | click here |
| aliiroseovarius crassostreae | Yes | species | bacteria | bacteria | species | 154981 | click here |
| aliivibrio fischeri | Yes | species | bacteria | bacteria | species | 668 | click here |
| ambidensovirus caadv1 | Yes | species | | | species | 1979848 | click here |
| ambidensovirus caadv2 | Yes | species | | | species | 1979849 | click here |
| arcobacter halophilus | Yes | species | bacteria | bacteria | species | 197482 | click here |
| arcobacter marinus | Yes | no rank | bacteria | bacteria | species | 505249 | click here |
| aspergillus terreus | Yes | species | eukaryota | plants | species | 33178 | click here |
| bacillus sp. | Yes | species | bacteria | bacteria | species | 1409 | click here |
| bacillus sp. cc-cg15-4 | Yes | no rank | bacteria | bacteria | species | 529497 | click here |
| bacterium mle6 | Yes | no rank | bacteria | bacteria | species | 659899 | click here |
| bacterium mle7 | Yes | no rank | bacteria | bacteria | species | 659900 | click here |
| bacterium mlm2 | Yes | no rank | bacteria | bacteria | species | 659901 | click here |
| bacterium mlm3 | Yes | no rank | bacteria | bacteria | species | 659902 | click here |
| bacterium mlt2 | Yes | no rank | bacteria | bacteria | species | 659903 | click here |
| bacterium ohdc-01 | No | no rank | | | species | 1549144 | click here |
| barfin flounder nervous necrosis virus | Yes | species | viruses and viroids | viruses | species | 43761 | click here |
| betanodavirus sp. | Yes | species | | | species | 1906674 | click here |
| bizionia sp. lpb0151 | Yes | no rank | | | species | 1850243 | click here |
| boccardiella hamata | Yes | species | | | species | 1642169 | click here |
| bonamia exitiosa | Yes | species | eukaryota | invertebrates | species | 362532 | click here |
| bonamia ostreae | Yes | species | eukaryota | invertebrates | species | 126728 | click here |
| bonamia sp. ca 1-16 011005e1.16 | Yes | no rank | eukaryota | invertebrates | species | 324690 | click here |
| bonamia sp. ca 9 0.1 6-1 12304e1.6 | Yes | no rank | eukaryota | invertebrates | species | 324691 | click here |
| bonamia sp. ca base 15-1 121504b15-1 | Yes | no rank | eukaryota | invertebrates | species | 324692 | click here |
| bonamia sp. ca base 22 121504b.22 | Yes | no rank | eukaryota | invertebrates | species | 324693 | click here |
| bonamia sp. ca pp#11 093005b.11 | Yes | no rank | eukaryota | invertebrates | species | 324694 | click here |
| bonamia sp. ex crassostrea ariakensis | Yes | no rank | eukaryota | invertebrates | species | 535766 | click here |
| citrobacter freundii | Yes | species | bacteria | bacteria | species | 546 | click here |
| colwellia sp. | Yes | species | | | species | 56799 | click here |
| cragig virus 1 | Yes | species | | | species | 2480172 | click here |
| cragig virus 10 | Yes | species | | | species | 2545480 | click here |
| cragig virus 2 | Yes | species | | | species | 2480173 | click here |
| cragig virus 3 | Yes | species | | | species | 2480174 | click here |
| cragig virus 6 | Yes | species | | | species | 2545477 | click here |
| cragig virus 7 | Yes | species | | | species | 2545478 | click here |
| cragig virus 8 | Yes | species | | | species | 2545479 | click here |
| cragig virus 9 | Yes | species | | | species | 2545481 | click here |
| crassostrea virginica symbiont cv812-530 | Yes | no rank | bacteria | bacteria | species | 154984 | click here |
| crassostrea virginica symbiont cv902-700 | Yes | no rank | bacteria | bacteria | species | 154983 | click here |
| cvsp bacterium cv1010-362 | Yes | no rank | bacteria | bacteria | species | 154982 | click here |
| escherichia coli | No | species | bacteria | bacteria | species | 562 | click here |
| exiguobacterium profundum | Yes | species | bacteria | bacteria | species | 307643 | click here |
| flavobacterium sp. lpb0076 | Yes | no rank | | | species | 1763534 | click here |
| formosa crassostrea | Yes | species | bacteria | bacteria | species | 490173 | click here |
| gamma proteobacterium o11 | Yes | no rank | bacteria | bacteria | species | 444271 | click here |
| gymnophalloides seoi | Yes | species | eukaryota | invertebrates | species | 87180 | click here |
| haplosporidium costale | Yes | species | eukaryota | invertebrates | species | 38246 | click here |
| haplosporidium nelsoni | Yes | species | eukaryota | invertebrates | species | 31296 | click here |
| hydrogenophaga sp. lpb0072 | Yes | no rank | | | species | 1763535 | click here |
| labyrinthulida sp. ex crassostrea ariakensis | Yes | no rank | eukaryota | plants | species | 410749 | click here |
| labyrinthulida sp. ex crassostrea virginica | Yes | no rank | eukaryota | plants | species | 410750 | click here |
| marinomonas arenicola | Yes | species | bacteria | bacteria | species | 569601 | click here |
| marinomonas sp. | Yes | species | | | species | 1904862 | click here |
| marteilia refringens | Yes | species | eukaryota | invertebrates | species | 107386 | click here |
| marteilioides chungmuensis | Yes | species | eukaryota | invertebrates | species | 204400 | click here |
| microbacterium maritypicum mf109 | Yes | no rank | | | no rank | 1333857 | click here |
| micromonospora sp. | Yes | no rank | bacteria | bacteria | species | 1876 | click here |
| mikrocytos mackini | Yes | species | eukaryota | invertebrates | species | 195010 | click here |
| mikrocytos mimicus | Yes | species | | | species | 1593239 | click here |
| mikrocytos sp. bc | Yes | no rank | eukaryota | invertebrates | species | 867164 | click here |
| nocardia crassostreae | Yes | species | bacteria | bacteria | species | 53428 | click here |
| norovirus gii | Yes | no rank | viruses and viroids | viruses | no rank | 122929 | click here |
| norovirus gii.6 | Yes | no rank | viruses and viroids | viruses | no rank | 499193 | click here |
| norovirus suminoe oyster/beibu gulf/2004/china | Yes | no rank | viruses and viroids | viruses | no rank | 330539 | click here |
| oceanimonas baumannii | No | species | bacteria | bacteria | species | 129578 | click here |
| ostreid herpesvirus 1 | Yes | species | viruses and viroids | viruses | species | 261939 | click here |
| oyster herpes-like virus | Yes | species | viruses and viroids | viruses | species | 72012 | click here |
| paenibacillus sp. lpb0068 | Yes | no rank | | | species | 1763538 | click here |
| pediococcus pentosaceus | Yes | species | bacteria | bacteria | species | 1255 | click here |
| perkinsus beihaiensis | Yes | species | | | species | 1074429 | click here |
| perkinsus chesapeaki | Yes | species | eukaryota | invertebrates | species | 330153 | click here |
| perkinsus marinus | Yes | species | eukaryota | invertebrates | species | 31276 | click here |
| perkinsus olseni | Yes | species | eukaryota | invertebrates | species | 32597 | click here |
| perkinsus sp. pmds-2009a | Yes | no rank | eukaryota | invertebrates | species | 604203 | click here |
| phaeobacter inhibens | Yes | species | bacteria | bacteria | species | 221822 | click here |
| photobacterium damselae | Yes | species | bacteria | bacteria | species | 38293 | click here |
| photobacterium gaetbulicola | Yes | species | | | species | 1295392 | click here |
| photobacterium jeanii | Yes | species | bacteria | bacteria | species | 858640 | click here |
| photobacterium sp. | Yes | no rank | bacteria | bacteria | species | 660 | click here |
| photobacterium sp. c1053775 | Yes | no rank | | | species | 1351698 | click here |
| photobacterium swingsii | Yes | no rank | bacteria | bacteria | species | 680026 | click here |
| polydora brevipalpa | Yes | species | | | species | 1167212 | click here |
| polydora cornuta | Yes | species | eukaryota | invertebrates | species | 438488 | click here |
| polydora hoplura | Yes | species | | | species | 1495204 | click here |
| polydora lingshuiensis | Yes | species | | | species | 1880939 | click here |
| polydora onagawaensis | Yes | species | | | species | 1133979 | click here |
| polydora websteri | Yes | species | | | species | 1167209 | click here |
| proteus mirabilis | Yes | species | bacteria | bacteria | species | 584 | click here |
| pseudoalteromonas atlantica | Yes | species | bacteria | bacteria | species | 288 | click here |
| pseudoalteromonas piscicida | Yes | species | bacteria | bacteria | species | 43662 | click here |
| pseudoalteromonas shioyasakiensis | Yes | species | | | species | 1190813 | click here |
| pseudoalteromonas sp. | Yes | species | bacteria | bacteria | species | 53249 | click here |
| pseudoalteromonas sp. 01/086 | Yes | no rank | bacteria | bacteria | species | 310095 | click here |
| pseudoalteromonas sp. 01/121 | Yes | no rank | bacteria | bacteria | species | 310096 | click here |
| pseudoalteromonas sp. 01/170 | Yes | no rank | bacteria | bacteria | species | 310097 | click here |
| pseudoalteromonas sp. 01/182 | Yes | no rank | bacteria | bacteria | species | 310098 | click here |
| pseudoalteromonas sp. 01/197 | Yes | no rank | bacteria | bacteria | species | 310099 | click here |
| pseudoalteromonas sp. 01/245 | Yes | no rank | bacteria | bacteria | species | 310100 | click here |
| pseudoalteromonas sp. 02/081 | Yes | no rank | bacteria | bacteria | species | 310101 | click here |