| abutilon mosaic virus | Yes | species | viruses and viroids | viruses | species | 10815 | click here |
| acaulospora sp. 0715-5 | Yes | no rank | eukaryota | plants | species | 490691 | click here |
| aceria tulipae | Yes | species | eukaryota | invertebrates | species | 109366 | click here |
| acidobacterium sp. orac | Yes | no rank | bacteria | bacteria | species | 747482 | click here |
| acidovorax avenae subsp. avenae | Yes | subspecies | bacteria | bacteria | subspecies | 80870 | click here |
| allexivirus ds-2013/cze | Yes | no rank | | | species | 1353793 | click here |
| 'allium ampeloprasum' phytoplasma | Yes | species | | | species | 1099911 | click here |
| allium carlavirus a | Yes | species | | | species | 2593962 | click here |
| allium cepa amalgavirus 1 | Yes | species | | | species | 2058778 | click here |
| allium cepa amalgavirus 2 | Yes | species | | | species | 2058779 | click here |
| 'allium cepa' leaf yellows phytoplasma | Yes | species | | | species | 1884857 | click here |
| 'allium cepa' phytoplasma | Yes | subspecies | bacteria | bacteria | species | 691330 | click here |
| allium fistulosum carlavirus | Yes | species | | | species | 2738900 | click here |
| allium polerovirus a | Yes | species | | | species | 2593979 | click here |
| 'allium porrum' stunting phytoplasma lest-br01 | Yes | species | | | species | 1789117 | click here |
| 'allium porrum' stunting phytoplasma lest-br02 | Yes | species | | | species | 1789124 | click here |
| 'allium porrum' stunting phytoplasma lest-br03 | Yes | species | | | species | 1789140 | click here |
| 'allium porrum' stunting phytoplasma lest-br06 | Yes | species | | | species | 1789125 | click here |
| 'allium porrum' stunting phytoplasma lest-br07 | Yes | species | | | species | 1789126 | click here |
| 'allium sativum' leaf yellows phytoplasma | Yes | species | | | species | 1884858 | click here |
| 'allium sativum' phytoplasma | Yes | species | | | species | 1334095 | click here |
| allium virus x | No | species | viruses and viroids | viruses | species | 317027 | click here |
| alternaria allii | Yes | species | | | species | 1568894 | click here |
| alternaria alternata | No | species | eukaryota | plants | species | 5599 | click here |
| alternaria alternata | Yes | species | eukaryota | plants | species | 5599 | click here |
| alternaria atra | Yes | species | eukaryota | plants | species | 119953 | click here |
| alternaria brassicicola | Yes | species | eukaryota | plants | species | 29001 | click here |
| alternaria burnsii | Yes | species | | | species | 1187904 | click here |
| alternaria embellisia | Yes | species | eukaryota | plants | species | 230009 | click here |
| alternaria palandui | Yes | species | eukaryota | plants | species | 365012 | click here |
| alternaria porri | Yes | species | eukaryota | plants | species | 48098 | click here |
| alternaria solani-nigri | Yes | no rank | | | species | 1187945 | click here |
| alternaria sp. | Yes | species | | | species | 1715220 | click here |
| alternaria sp. td18 | Yes | no rank | | | species | 1527429 | click here |
| alternaria tenuissima | Yes | species | eukaryota | plants | species | 119927 | click here |
| alternaria thunbergiae | Yes | species | | | species | 1568918 | click here |
| aneurinibacillus aneurinilyticus | Yes | species | bacteria | bacteria | species | 1391 | click here |
| aphelenchoides varicaudatus | Yes | species | | | species | 1068860 | click here |
| aphis craccivora | Yes | species | eukaryota | invertebrates | species | 307492 | click here |
| aphis fabae | Yes | species | eukaryota | invertebrates | species | 191316 | click here |
| aphis gossypii | Yes | species | eukaryota | invertebrates | species | 80765 | click here |
| asparagus virus 3 | Yes | species | viruses and viroids | viruses | species | 445435 | click here |
| aspergillus alliaceus | Yes | species | eukaryota | plants | species | 209559 | click here |
| aspergillus awamori | Yes | species | eukaryota | plants | species | 105351 | click here |
| aspergillus brasiliensis | Yes | species | eukaryota | plants | species | 319629 | click here |
| aspergillus carbonarius | Yes | species | eukaryota | plants | species | 40993 | click here |
| aspergillus chevalieri | Yes | species | eukaryota | plants | species | 182096 | click here |
| aspergillus ellipticus | Yes | species | eukaryota | plants | species | 41066 | click here |
| aspergillus europaeus | Yes | no rank | eukaryota | plants | species | 660491 | click here |
| aspergillus flavus | Yes | species | eukaryota | plants | species | 5059 | click here |
| aspergillus japonicus | Yes | species | eukaryota | plants | species | 34381 | click here |
| aspergillus niger | Yes | species | eukaryota | plants | species | 5061 | click here |
| aspergillus sp. | Yes | no rank | eukaryota | plants | species | 5065 | click here |
| aspergillus tamarii | Yes | species | eukaryota | plants | species | 41984 | click here |
| aspergillus terreus | Yes | species | eukaryota | plants | species | 33178 | click here |
| aspergillus tubingensis | Yes | species | eukaryota | plants | species | 5068 | click here |
| aspergillus vadensis | Yes | species | eukaryota | plants | species | 288669 | click here |
| aspergillus welwitschiae | Yes | species | | | species | 1341132 | click here |
| aster yellows phytoplasma | Yes | subspecies | bacteria | bacteria | species | 35779 | click here |
| athelia rolfsii | Yes | species | eukaryota | plants | species | 39291 | click here |
| bacillus amyloliquefaciens | Yes | species | bacteria | bacteria | species | 1390 | click here |
| bacillus anthracis | Yes | species | bacteria | bacteria | species | 1392 | click here |
| bacillus cereus | Yes | species | bacteria | bacteria | species | 1396 | click here |
| bacillus endophyticus | Yes | species | bacteria | bacteria | species | 135735 | click here |
| bacillus pumilus | Yes | species | bacteria | bacteria | species | 1408 | click here |
| bacillus siamensis | Yes | no rank | bacteria | bacteria | species | 659243 | click here |
| bacillus sp. | Yes | species | bacteria | bacteria | species | 1409 | click here |
| bacillus subtilis | Yes | species | bacteria | bacteria | species | 1423 | click here |
| bacillus subtilis subsp. spizizenii | Yes | subspecies | bacteria | bacteria | subspecies | 96241 | click here |
| bacillus tequilensis | Yes | species | bacteria | bacteria | species | 227866 | click here |
| bacillus thuringiensis | Yes | species | bacteria | bacteria | species | 1428 | click here |
| bacillus velezensis | Yes | species | bacteria | bacteria | species | 492670 | click here |
| beauveria bassiana | Yes | species | eukaryota | plants | species | 176275 | click here |
| botryotinia squamosa | No | species | eukaryota | plants | species | 139640 | click here |
| botryotinia squamosa | Yes | species | eukaryota | plants | species | 139640 | click here |
| botrytis aclada | Yes | species | eukaryota | plants | species | 139639 | click here |
| botrytis allii | Yes | species | eukaryota | plants | species | 279185 | click here |
| botrytis byssoidea | No | species | eukaryota | plants | species | 139641 | click here |
| botrytis cinerea | Yes | species | eukaryota | plants | species | 40559 | click here |
| botrytis porri | Yes | species | eukaryota | plants | species | 87229 | click here |
| botrytis sinoallii | No | species | | | species | 1463999 | click here |
| botrytis sinoallii | Yes | species | | | species | 1463999 | click here |
| botrytis sp. | Yes | species | | | species | 1849799 | click here |
| bradysia impatiens | Yes | species | eukaryota | invertebrates | species | 335710 | click here |
| bradysia odoriphaga | Yes | species | | | species | 1564500 | click here |
| bradysia sp. ma-2017 | Yes | no rank | | | species | 2014600 | click here |
| brevibacillus parabrevis | Yes | species | bacteria | bacteria | species | 54914 | click here |
| brevundimonas diminuta | Yes | species | bacteria | bacteria | species | 293 | click here |
| burkholderia cenocepacia | Yes | species | bacteria | bacteria | species | 95486 | click here |
| burkholderia cepacia | Yes | species | bacteria | bacteria | species | 292 | click here |
| burkholderia cepacia atcc 25416 | Yes | no rank | bacteria | bacteria | no rank | 983594 | click here |
| burkholderia gladioli | Yes | species | bacteria | bacteria | species | 28095 | click here |
| burkholderia gladioli pv. alliicola | Yes | no rank | bacteria | bacteria | no rank | 32010 | click here |
| burkholderia gladioli pv. gladioli | Yes | no rank | bacteria | bacteria | no rank | 32009 | click here |
| cacoecimorpha pronubana | Yes | species | eukaryota | invertebrates | species | 287198 | click here |
| candidatus phytoplasma asteris -related phytoplasma | Yes | species | | | species | 2213006 | click here |
| candidatus phytoplasma trifolii | Yes | subspecies | bacteria | bacteria | species | 35776 | click here |
| cauliflower mosaic virus | Yes | species | viruses and viroids | viruses | species | 10641 | click here |
| ceratobasidium sp. | Yes | species | | | species | 1768090 | click here |
| ceratobasidium sp. ag-a | Yes | no rank | eukaryota | plants | species | 170450 | click here |