| acaulospora viridis | Yes | species | | | species | 1385717 | click here |
| acidovorax sp. ct 6-07 | Yes | no rank | | | species | 1533942 | click here |
| acremonium sp. 37-11 | Yes | no rank | | | species | 1500233 | click here |
| actinomadura sp. yim 65650 | Yes | no rank | bacteria | bacteria | species | 714111 | click here |
| actinomadura sp. yim 65655 | Yes | no rank | bacteria | bacteria | species | 714112 | click here |
| actinomadura sp. yim 65659 | Yes | no rank | bacteria | bacteria | species | 714113 | click here |
| actinomadura sp. yim 65810 | Yes | no rank | bacteria | bacteria | species | 714115 | click here |
| agrobacterium tumefaciens | No | species | bacteria | bacteria | species | 358 | click here |
| alternaria alternata | Yes | species | eukaryota | plants | species | 5599 | click here |
| alternaria brassicae | Yes | species | eukaryota | plants | species | 29911 | click here |
| alternaria solani | Yes | species | eukaryota | plants | species | 48100 | click here |
| alternaria sp. | Yes | species | | | species | 1715220 | click here |
| alternaria sp. 6262 | Yes | no rank | | | species | 1155311 | click here |
| alternaria sp. gzucczy0015 | Yes | no rank | | | species | 1453506 | click here |
| alternaria sp. gzucczy0804 | Yes | no rank | | | species | 1453507 | click here |
| alternaria sp. sps-04 | Yes | no rank | | | species | 1565366 | click here |
| alternaria tenuissima | Yes | species | eukaryota | plants | species | 119927 | click here |
| alternariaster helianthi | Yes | species | eukaryota | plants | species | 1342371 | click here |
| amonostherium lichtensioides | No | species | eukaryota | invertebrates | species | 252477 | click here |
| amycolatopsis sp. yim 65625 | Yes | no rank | bacteria | bacteria | species | 714117 | click here |
| aphis canae | Yes | species | | | species | 1455640 | click here |
| aphis sp. dml-2014 | No | no rank | | | species | 1457204 | click here |
| aplosporella prunicola | Yes | species | eukaryota | plants | species | 462254 | click here |
| artemisia carvifolia genomoviridae | Yes | species | | | species | 2739880 | click here |
| artemisia carvifolia potyvirus | Yes | species | | | species | 2739374 | click here |
| 'artemisia scoparia' witches'-broom phytoplasma | Yes | species | | | species | 1809191 | click here |
| artemisia virus a | Yes | species | | | species | 1133751 | click here |
| artemisia virus b | Yes | species | | | species | 2812730 | click here |
| 'artemisia vulgaris' little leaf yellowing phytoplasma | Yes | species | | | species | 1144747 | click here |
| 'artemisia vulgaris' phytoplasma | Yes | species | | | species | 1177237 | click here |
| artemisia witches'-broom phytoplasma | Yes | species | bacteria | bacteria | species | 415756 | click here |
| arthrinium sacchari | Yes | species | eukaryota | plants | species | 166626 | click here |
| ascochyta sp. | Yes | species | | | species | 1756117 | click here |
| ascomycota sp. 18-2 | Yes | no rank | | | species | 1500227 | click here |
| ascomycota sp. 37-4 | Yes | no rank | | | species | 1500228 | click here |
| aspergillus aculeatus | No | species | eukaryota | plants | species | 5053 | click here |
| aspergillus flavipes | Yes | species | eukaryota | plants | species | 41900 | click here |
| aspergillus flavus | Yes | species | eukaryota | plants | species | 5059 | click here |
| aspergillus fumigatus | Yes | species | eukaryota | plants | species | 746128 | click here |
| aspergillus niger | Yes | species | eukaryota | plants | species | 5061 | click here |
| aspergillus sp. | Yes | no rank | eukaryota | plants | species | 5065 | click here |
| aspergillus sp. 37-12 | Yes | no rank | | | species | 1500229 | click here |
| aspergillus sp. gzuccky0002 | Yes | no rank | | | species | 1453508 | click here |
| aspergillus sp. gzucczy0803 | Yes | no rank | | | species | 1453509 | click here |
| aspergillus sp. gzucczy0901 | Yes | no rank | | | species | 1453510 | click here |
| aspergillus versicolor | Yes | species | eukaryota | plants | species | 46472 | click here |
| athelia rolfsii | Yes | species | eukaryota | plants | species | 39291 | click here |
| aureobasidium pullulans | Yes | species | eukaryota | plants | species | 5580 | click here |
| bacillus aryabhattai | No | species | bacteria | bacteria | species | 412384 | click here |
| bacillus cereus | Yes | species | bacteria | bacteria | species | 1396 | click here |
| bacillus licheniformis | Yes | species | bacteria | bacteria | species | 1402 | click here |
| bacillus sp. dt2-01 | Yes | no rank | | | species | 1433250 | click here |
| bacillus sp. st 5-02 | Yes | no rank | | | species | 1533955 | click here |
| bacillus sp. sz3 | Yes | no rank | bacteria | bacteria | species | 879554 | click here |
| bacillus sp. ut 6-01 | Yes | no rank | | | species | 1533956 | click here |
| bacillus subtilis | Yes | species | bacteria | bacteria | species | 1423 | click here |
| bacillus thuringiensis | Yes | species | bacteria | bacteria | species | 1428 | click here |
| bacillus vallismortis | No | species | bacteria | bacteria | species | 72361 | click here |
| bipolaris setariae | Yes | species | eukaryota | plants | species | 74419 | click here |
| biscogniauxia mediterranea | Yes | species | eukaryota | plants | species | 97377 | click here |
| bjerkandera sp. gzuccmj0004 | Yes | no rank | | | species | 1453511 | click here |
| boeremia exigua | Yes | species | eukaryota | plants | species | 749465 | click here |
| boeremia sp. | Yes | species | | | species | 1962293 | click here |
| bosea sp. cr 6-01 | Yes | no rank | | | species | 1533957 | click here |
| bosea sp. sr5-12 | Yes | no rank | | | species | 1433252 | click here |
| botryosphaeria dothidea | No | species | eukaryota | plants | species | 55169 | click here |
| botryosphaeria dothidea | Yes | species | eukaryota | plants | species | 55169 | click here |
| bradyrhizobium sp. ur 6-10 | Yes | no rank | | | species | 1533966 | click here |
| burkholderia sp. art7 | Yes | no rank | | | species | 1654713 | click here |
| burkholderia sp. ur 6-07 | Yes | no rank | | | species | 1533982 | click here |
| cadophora orchidicola | Yes | species | eukaryota | plants | species | 1732013 | click here |
| camarosporidiella elaeagnicola | Yes | species | | | species | 2040558 | click here |
| camarosporium brabeji | Yes | species | eukaryota | plants | species | 531885 | click here |
| camarosporium sp. | Yes | species | | | species | 1756129 | click here |
| caulobacter sp. ur 6-06 | Yes | no rank | | | species | 1533992 | click here |
| cercospora capsici | Yes | species | eukaryota | plants | species | 438341 | click here |
| cercospora sp. gzuccky1502 | Yes | no rank | | | species | 1453512 | click here |
| chaetomium globosum | Yes | species | eukaryota | plants | species | 38033 | click here |
| chryseobacterium sp. ut 6-11 | Yes | no rank | | | species | 1533999 | click here |
| cladosporium cladosporioides | Yes | species | eukaryota | plants | species | 29917 | click here |
| cladosporium sp. | Yes | species | | | species | 1707700 | click here |
| cochliobolus sp. 27-3 | Yes | no rank | | | species | 1500230 | click here |
| colletotrichum capsici | Yes | species | eukaryota | plants | species | 5456 | click here |
| colletotrichum gloeosporioides | Yes | species | eukaryota | plants | species | 474922 | click here |
| colletotrichum sp. gzucchx0401 | Yes | no rank | | | species | 1453513 | click here |
| colletotrichum sp. gzuccmj2102 | Yes | no rank | | | species | 1453514 | click here |
| colletotrichum sp. gzuccql0203 | Yes | no rank | | | species | 1453515 | click here |
| colletotrichum sp. gzucczy0101 | Yes | no rank | | | species | 1453516 | click here |
| colletotrichum sp. gzucczy0102 | Yes | no rank | | | species | 1453517 | click here |
| colletotrichum sp. gzucczy0103 | Yes | no rank | | | species | 1453518 | click here |
| colletotrichum sp. gzucczy0802 | Yes | no rank | | | species | 1453519 | click here |
| coniothyrium sp. | Yes | species | | | species | 1756115 | click here |
| corallomycetella repens | Yes | species | eukaryota | plants | species | 1170406 | click here |
| cryptosiphum artemisiae | Yes | species | eukaryota | invertebrates | species | 511028 | click here |
| cupriavidus sp. cr 6-13 | Yes | no rank | | | species | 1534001 | click here |
| curvularia geniculata | Yes | species | eukaryota | plants | species | 418126 | click here |
| curvularia intermedia | Yes | species | eukaryota | plants | species | 95735 | click here |
| curvularia sp. 27-2 | Yes | no rank | | | species | 1500231 | click here |
| curvularia spicifera | Yes | species | eukaryota | plants | species | 145392 | click here |
| cyphocleonus dealbatus | Yes | species | | | species | 1617954 | click here |