| [candida] hawaiiana | Yes | species | eukaryota | plants | species | 197672 | click here |
| [candida] ipomoeae | Yes | species | eukaryota | plants | species | 1807681 | click here |
| achroiostachys levigata | Yes | species | | | species | 1859648 | click here |
| achromobacter xylosoxidans | Yes | species | bacteria | bacteria | species | 85698 | click here |
| acinetobacter sp. | Yes | species | bacteria | bacteria | species | 472 | click here |
| acinetobacter sp. 'host cip 421115' | Yes | no rank | | | species | 1384462 | click here |
| acremonium sclerotigenum | Yes | species | eukaryota | plants | species | 261921 | click here |
| acremonium sp. | Yes | no rank | eukaryota | plants | species | 5045 | click here |
| acrocalymma medicaginis | Yes | species | | | species | 1589763 | click here |
| acrocalymma vagum | Yes | species | eukaryota | plants | species | 1589764 | click here |
| acrophialophora sp. | Yes | species | | | species | 2049268 | click here |
| actinoallomurus sp. pendo-1811 | Yes | no rank | bacteria | bacteria | species | 675306 | click here |
| aethina concolor | Yes | species | eukaryota | invertebrates | species | 225190 | click here |
| ageratum yellow vein alphasatellite | No | no rank | viruses and viroids | viruses | species | 187850 | click here |
| agrobacterium fabrum | Yes | species | | | species | 1176649 | click here |
| agrobacterium larrymoorei | Yes | species | bacteria | bacteria | species | 160699 | click here |
| agrobacterium tumefaciens | Yes | species | bacteria | bacteria | species | 358 | click here |
| albugo ipomoeae-panduratae | No | species | eukaryota | plants | species | 295094 | click here |
| albugo ipomoeae-panduratae | Yes | species | eukaryota | plants | species | 295094 | click here |
| aleurothrixus trachoides | Yes | species | | | species | 2710796 | click here |
| alfalfa mosaic virus | Yes | species | viruses and viroids | viruses | species | 12321 | click here |
| allophoma oligotrophica | Yes | species | | | species | 2021018 | click here |
| allophoma tropica | Yes | species | eukaryota | plants | species | 749874 | click here |
| alternaria alternata | Yes | species | eukaryota | plants | species | 5599 | click here |
| alternaria argyroxiphii | Yes | species | | | species | 1187903 | click here |
| alternaria bataticola | Yes | species | eukaryota | plants | species | 48094 | click here |
| alternaria infectoria | Yes | species | eukaryota | plants | species | 45303 | click here |
| alternaria ipomoeae | Yes | species | | | species | 1568906 | click here |
| alternaria neoipomoeae | Yes | species | | | species | 1568909 | click here |
| alternaria sp. | Yes | species | | | species | 1715220 | click here |
| alternaria sp. tv-02 | Yes | no rank | | | species | 1653764 | click here |
| alternaria tenuissima | Yes | species | eukaryota | plants | species | 119927 | click here |
| alternaria triticina | Yes | species | eukaryota | plants | species | 216836 | click here |
| aphelenchoides sp. 8asp | Yes | no rank | | | species | 2048054 | click here |
| apiosporaceae sp. iasaf02 | Yes | no rank | eukaryota | plants | species | 338725 | click here |
| araecerus fasciculatus | Yes | species | eukaryota | invertebrates | species | 251759 | click here |
| arthrobacter enclensis | Yes | no rank | bacteria | bacteria | species | 993070 | click here |
| ascomycota sp. | Yes | species | | | species | 1709939 | click here |
| aspergillus aculeatinus | Yes | species | eukaryota | plants | species | 487661 | click here |
| aspergillus corrugatus | Yes | species | eukaryota | plants | species | 210208 | click here |
| aspergillus flavus | Yes | species | eukaryota | plants | species | 5059 | click here |
| aspergillus fumigatus | Yes | species | eukaryota | plants | species | 746128 | click here |
| aspergillus hiratsukae | Yes | species | | | species | 1194566 | click here |
| aspergillus nidulans | Yes | species | eukaryota | plants | species | 162425 | click here |
| aspergillus niger | Yes | species | eukaryota | plants | species | 5061 | click here |
| aspergillus sp. | Yes | no rank | eukaryota | plants | species | 5065 | click here |
| aspergillus sydowii | Yes | species | eukaryota | plants | species | 75750 | click here |
| aspergillus terreus | Yes | species | eukaryota | plants | species | 33178 | click here |
| aspergillus tubingensis | Yes | species | eukaryota | plants | species | 5068 | click here |
| aspergillus wentii | Yes | species | eukaryota | plants | species | 5066 | click here |
| aster yellows phytoplasma | Yes | subspecies | bacteria | bacteria | species | 35779 | click here |
| athelia rolfsii | Yes | species | eukaryota | plants | species | 39291 | click here |
| aureobasidium melanogenum | Yes | species | eukaryota | plants | species | 46634 | click here |
| aureobasidium pullulans | Yes | species | eukaryota | plants | species | 5580 | click here |
| babesia sp. 'venatorum' | Yes | no rank | eukaryota | invertebrates | species | 171411 | click here |
| bacillus aerophilus | Yes | species | bacteria | bacteria | species | 293389 | click here |
| bacillus altitudinis | Yes | species | bacteria | bacteria | species | 293387 | click here |
| bacillus aryabhattai | Yes | species | bacteria | bacteria | species | 412384 | click here |
| bacillus cereus | Yes | species | bacteria | bacteria | species | 1396 | click here |
| bacillus endophyticus | Yes | species | bacteria | bacteria | species | 135735 | click here |
| bacillus firmus | Yes | species | bacteria | bacteria | species | 1399 | click here |
| bacillus licheniformis | Yes | species | bacteria | bacteria | species | 1402 | click here |
| bacillus megaterium | Yes | species | bacteria | bacteria | species | 1404 | click here |
| bacillus pumilus | Yes | species | bacteria | bacteria | species | 1408 | click here |
| bacillus safensis | Yes | species | bacteria | bacteria | species | 561879 | click here |
| bacillus sp. | Yes | species | bacteria | bacteria | species | 1409 | click here |
| bacillus subtilis | Yes | species | bacteria | bacteria | species | 1423 | click here |
| bacillus thuringiensis | Yes | species | bacteria | bacteria | species | 1428 | click here |
| bacillus vireti | Yes | species | bacteria | bacteria | species | 220686 | click here |
| bacillus wiedmannii | Yes | species | | | species | 1890302 | click here |
| bacterium enrichment culture clone 1(2011) | Yes | no rank | | | species | 1094589 | click here |
| bacterium enrichment culture clone 1a | Yes | no rank | | | species | 1094591 | click here |
| bacterium enrichment culture clone 1b | Yes | no rank | | | species | 1094592 | click here |
| bacterium enrichment culture clone 2a | Yes | no rank | | | species | 1094590 | click here |
| bacterium enrichment culture clone 2b | Yes | no rank | | | species | 1094593 | click here |
| bacterium enrichment culture clone 2c | Yes | no rank | | | species | 1094594 | click here |
| bacterium enrichment culture clone dy4 | Yes | no rank | | | species | 1094595 | click here |
| bacterium 'host cip 187002.1' | Yes | no rank | | | species | 1384467 | click here |
| basidiomycete sp. iasaf01 | Yes | no rank | eukaryota | plants | species | 338721 | click here |
| basidiomycete sp. iasaf07 | Yes | no rank | eukaryota | plants | species | 338722 | click here |
| basidiomycete sp. iasaf11 | Yes | no rank | eukaryota | plants | species | 338723 | click here |
| begomovirus sp. | Yes | species | | | species | 1911905 | click here |
| bemisia afer | Yes | species | eukaryota | invertebrates | species | 166114 | click here |
| bemisia tabaci | No | species | eukaryota | invertebrates | species | 7038 | click here |
| bemisia tabaci | Yes | species | eukaryota | invertebrates | species | 7038 | click here |
| bhendi yellow vein mosaic virus | Yes | species | viruses and viroids | viruses | species | 120168 | click here |
| bipolaris sorokiniana | Yes | species | eukaryota | plants | species | 45130 | click here |
| bipolaris sp. | Yes | species | | | species | 1756142 | click here |
| boeremia exigua | Yes | species | eukaryota | plants | species | 749465 | click here |
| brachybacterium rhamnosum | Yes | species | bacteria | bacteria | species | 173361 | click here |
| bradyrhizobium sp. at1 | Yes | no rank | bacteria | bacteria | species | 574934 | click here |
| brevibacillus sp. | Yes | species | | | species | 1882945 | click here |
| brevibacterium casei | Yes | species | bacteria | bacteria | species | 33889 | click here |
| brevipalpus obovatus | Yes | species | eukaryota | invertebrates | species | 246614 | click here |
| brevipalpus papayensis | Yes | species | | | species | 1754061 | click here |
| brevipalpus yothersi | Yes | species | | | species | 1754060 | click here |
| burkholderia ambifaria | Yes | species | bacteria | bacteria | species | 152480 | click here |
| burkholderia cenocepacia | Yes | species | bacteria | bacteria | species | 95486 | click here |
| burkholderia cepacia | Yes | species | bacteria | bacteria | species | 292 | click here |
| burkholderia gladioli | Yes | species | bacteria | bacteria | species | 28095 | click here |