| acinetobacter sp. zzx12 | No | no rank | | | species | 1476933 | click here |
| acremonium egyptiacum | Yes | species | eukaryota | plants | species | 749675 | click here |
| acremonium radiatum | Yes | species | | | species | 1036758 | click here |
| acremonium sclerotigenum | No | species | eukaryota | plants | species | 261921 | click here |
| acremonium sp. ac1 | Yes | no rank | | | species | 1159004 | click here |
| acremonium sp. ac2 | Yes | no rank | | | species | 1159006 | click here |
| agrobacterium genomosp. 7 | No | no rank | | | species | 1183412 | click here |
| agrobacterium rhizogenes | No | species | bacteria | bacteria | species | 359 | click here |
| agrobacterium rhizogenes | Yes | species | bacteria | bacteria | species | 359 | click here |
| agrobacterium rubi | No | species | bacteria | bacteria | species | 28099 | click here |
| agrobacterium rubi | Yes | species | bacteria | bacteria | species | 28099 | click here |
| agrobacterium sp. | Yes | species | bacteria | bacteria | species | 361 | click here |
| agrobacterium tumefaciens | No | species | bacteria | bacteria | species | 358 | click here |
| agrobacterium tumefaciens | Yes | species | bacteria | bacteria | species | 358 | click here |
| agrobacterium viscosum | No | species | bacteria | bacteria | species | 300300 | click here |
| agrobacterium vitis | No | species | bacteria | bacteria | species | 373 | click here |
| alcaligenes sp. | No | species | bacteria | bacteria | species | 512 | click here |
| allantus rufocinctus | Yes | species | | | species | 1384742 | click here |
| allantus viennensis | Yes | species | | | species | 1384745 | click here |
| alternaria alstroemeriae | Yes | species | | | species | 1111114 | click here |
| alternaria alternata | No | species | eukaryota | plants | species | 5599 | click here |
| alternaria alternata | Yes | species | eukaryota | plants | species | 5599 | click here |
| alternaria brassicicola | Yes | species | eukaryota | plants | species | 29001 | click here |
| alternaria calendulae | Yes | species | | | species | 1187905 | click here |
| alternaria daucifolii | Yes | species | | | species | 1342363 | click here |
| alternaria destruens | Yes | species | eukaryota | plants | species | 230003 | click here |
| alternaria eichhorniae | Yes | species | eukaryota | plants | species | 489833 | click here |
| alternaria longipes | Yes | species | eukaryota | plants | species | 160389 | click here |
| alternaria rosae | Yes | species | | | species | 1187941 | click here |
| alternaria sp. | No | species | | | species | 1715220 | click here |
| alternaria sp. td23 | Yes | no rank | | | species | 1527434 | click here |
| alternaria tenuissima | Yes | species | eukaryota | plants | species | 119927 | click here |
| ambispora leptoticha | Yes | species | eukaryota | plants | species | 144679 | click here |
| amphisphaeria sp. is-2015 | Yes | no rank | | | species | 1699758 | click here |
| anagrus ustulatus | Yes | species | eukaryota | invertebrates | species | 473338 | click here |
| angustimassarina quercicola | Yes | species | | | species | 1641160 | click here |
| apple mosaic virus | No | species | viruses and viroids | viruses | species | 12319 | click here |
| apple mosaic virus | Yes | species | viruses and viroids | viruses | species | 12319 | click here |
| apple stem grooving virus | No | species | viruses and viroids | viruses | species | 28347 | click here |
| apple stem grooving virus | Yes | species | viruses and viroids | viruses | species | 28347 | click here |
| arabis mosaic virus | Yes | species | viruses and viroids | viruses | species | 12271 | click here |
| ardis brunniventris | Yes | species | eukaryota | invertebrates | species | 362104 | click here |
| armillaria mellea | No | species | eukaryota | plants | species | 47429 | click here |
| arthrobacter sp. edens01 | Yes | no rank | | | species | 1732020 | click here |
| ascochyta herbicola | Yes | species | eukaryota | plants | species | 749840 | click here |
| aspergillus aculeatinus | Yes | species | eukaryota | plants | species | 487661 | click here |
| aspergillus aculeatus | Yes | species | eukaryota | plants | species | 5053 | click here |
| aspergillus flavus | Yes | species | eukaryota | plants | species | 5059 | click here |
| aspergillus fumigatus | Yes | species | eukaryota | plants | species | 746128 | click here |
| aspergillus niger | Yes | species | eukaryota | plants | species | 5061 | click here |
| aspergillus sydowii | Yes | species | eukaryota | plants | species | 75750 | click here |
| aspergillus terreus | Yes | species | eukaryota | plants | species | 33178 | click here |
| aspergillus uvarum | Yes | species | eukaryota | plants | species | 446911 | click here |
| bacillus amyloliquefaciens | No | species | bacteria | bacteria | species | 1390 | click here |
| bacillus amyloliquefaciens | Yes | species | bacteria | bacteria | species | 1390 | click here |
| bacillus safensis | No | species | bacteria | bacteria | species | 561879 | click here |
| bacillus sp. | No | species | bacteria | bacteria | species | 1409 | click here |
| bacillus sp. zzx16 | No | no rank | | | species | 1476937 | click here |
| bacillus velezensis | No | species | bacteria | bacteria | species | 492670 | click here |
| batocera horsfieldi | Yes | species | eukaryota | invertebrates | species | 351105 | click here |
| bemisia tabaci | No | species | eukaryota | invertebrates | species | 7038 | click here |
| bemisia tabaci | Yes | species | eukaryota | invertebrates | species | 7038 | click here |
| bjerkandera adusta | Yes | species | eukaryota | plants | species | 5331 | click here |
| blackberry chlorotic ringspot virus | No | species | viruses and viroids | viruses | species | 339420 | click here |
| blackberry chlorotic ringspot virus | Yes | species | viruses and viroids | viruses | species | 339420 | click here |
| botryosphaeria auasmontanum | Yes | species | | | species | 1469309 | click here |
| botryosphaeria dothidea | Yes | species | eukaryota | plants | species | 55169 | click here |
| botryosphaeria wangensis | Yes | species | | | species | 2008654 | click here |
| botrytis cinerea | No | species | eukaryota | plants | species | 40559 | click here |
| botrytis cinerea | Yes | species | eukaryota | plants | species | 40559 | click here |
| botrytis elliptica | Yes | species | eukaryota | plants | species | 278938 | click here |
| byssochlamys spectabilis | Yes | species | eukaryota | plants | species | 264951 | click here |
| cadophora luteo-olivacea | Yes | species | eukaryota | plants | species | 227289 | click here |
| cadophora malorum | Yes | species | eukaryota | plants | species | 108018 | click here |
| cadophora orchidicola | Yes | species | eukaryota | plants | species | 1732013 | click here |
| calonectria blephiliae | Yes | species | | | species | 1414610 | click here |
| calonectria cerciana | Yes | species | eukaryota | plants | species | 746826 | click here |
| calonectria cylindrospora | No | species | eukaryota | plants | species | 40624 | click here |
| camporesia sambuci | Yes | species | | | species | 1867855 | click here |
| candida sp. | No | species | | | species | 1853550 | click here |
| candidatus phytoplasma aurantifolia | No | subspecies | bacteria | bacteria | species | 180978 | click here |
| candidatus phytoplasma balanitae | Yes | species | | | species | 1130089 | click here |
| candidatus phytoplasma solani | No | subspecies | bacteria | bacteria | species | 69896 | click here |
| carpomya schineri | Yes | species | eukaryota | invertebrates | species | 584940 | click here |
| ceratobasidium sp. ag-g | Yes | no rank | eukaryota | plants | species | 305859 | click here |
| ceratobasidium sp. ag-t | Yes | no rank | eukaryota | plants | species | 305862 | click here |
| ceratobasidium sp. ag-u | Yes | no rank | eukaryota | plants | species | 305863 | click here |
| ceratobasidium sp. rr82 | Yes | no rank | | | species | 1430266 | click here |
| ceratocystis cf. paradoxa cbs 101054 | Yes | no rank | | | species | 1346830 | click here |
| cercophora coprophila | Yes | species | eukaryota | plants | species | 314027 | click here |
| cercospora beticola | Yes | species | eukaryota | plants | species | 122368 | click here |
| cercospora canescens | Yes | species | eukaryota | plants | species | 132095 | click here |
| cercospora capsici | Yes | species | eukaryota | plants | species | 438341 | click here |
| cercospora chrysanthemi | Yes | species | | | species | 1347407 | click here |
| cercospora lagenariae | Yes | species | | | species | 1347408 | click here |
| cercospora sp. | Yes | species | | | species | 1707699 | click here |
| chaetomium globosum | Yes | species | eukaryota | plants | species | 38033 | click here |
| chaetomium rectangulare | Yes | species | | | species | 1041802 | click here |
| chaetomium subaffine | Yes | species | | | species | 1036253 | click here |
| chaetomium subglobosum | Yes | species | | | species | 1104806 | click here |