| acetobacter malorum | No | species | bacteria | bacteria | species | 178901 | click here |
| agrobacterium tumefaciens | No | species | bacteria | bacteria | species | 358 | click here |
| alternaria alternata | No | species | eukaryota | plants | species | 5599 | click here |
| alternaria mali | No | species | eukaryota | plants | species | 167741 | click here |
| alternaria tenuissima | No | species | eukaryota | plants | species | 119927 | click here |
| apple chlorotic leaf spot virus | No | species | viruses and viroids | viruses | species | 12175 | click here |
| apple hammerhead viroid | No | species | | | species | 2485233 | click here |
| apple luteovirus 1 | No | species | | | species | 2170544 | click here |
| apple mosaic virus | No | species | viruses and viroids | viruses | species | 12319 | click here |
| apple rubbery wood virus 2 | No | no rank | | | no rank | 2164103 | click here |
| apple scar skin viroid | No | species | viruses and viroids | viruses | species | 12895 | click here |
| apple stem grooving virus | No | species | viruses and viroids | viruses | species | 28347 | click here |
| apple stem pitting virus | No | species | viruses and viroids | viruses | species | 35350 | click here |
| botryosphaeria dothidea | No | species | eukaryota | plants | species | 55169 | click here |
| brevipalpus sp. ad1016 | No | no rank | | | species | 2051740 | click here |
| candidatus phytoplasma mali | No | subspecies | bacteria | bacteria | species | 37692 | click here |
| candidatus phytoplasma trifolii | No | subspecies | bacteria | bacteria | species | 35776 | click here |
| carposina sasakii | No | species | eukaryota | invertebrates | species | 252295 | click here |
| cherry leaf roll virus | No | species | viruses and viroids | viruses | species | 12615 | click here |
| citrus concave gum-associated virus | No | no rank | | | no rank | 2024604 | click here |
| collarispora valgourgensis | No | species | | | species | 2059801 | click here |
| colletotrichum acutatum | No | species | eukaryota | plants | species | 27357 | click here |
| colletotrichum alienum | No | species | | | species | 1215734 | click here |
| colletotrichum gloeosporioides | No | species | eukaryota | plants | species | 474922 | click here |
| colletotrichum godetiae | No | species | | | species | 1209918 | click here |
| colletotrichum karstii | No | species | | | species | 1095194 | click here |
| colletotrichum melonis | No | species | | | species | 1209925 | click here |
| cytospora carbonacea | No | species | eukaryota | plants | species | 356887 | click here |
| cytospora ceratosperma | No | species | | | species | 1928361 | click here |
| cytospora leucostoma | No | species | eukaryota | plants | species | 1230097 | click here |
| cytospora mali | No | species | eukaryota | plants | species | 578113 | click here |
| cytospora parakantschavelii | No | species | | | species | 1954265 | click here |
| cytospora parasitica | No | species | | | species | 1765646 | click here |
| cytospora pruinopsis | No | species | | | species | 1590029 | click here |
| cytospora salicicola | No | species | | | species | 1912663 | click here |
| cytospora schulzeri | No | species | eukaryota | plants | species | 448051 | click here |
| daldinia fissa | No | species | eukaryota | plants | species | 103427 | click here |
| daldinia gelatinosa | No | species | | | species | 1358883 | click here |
| diaporthe eres | No | species | eukaryota | plants | species | 83184 | click here |
| diaspidiotus ancylus | No | species | | | species | 862673 | click here |
| didymella glomerata | No | species | eukaryota | plants | species | 749621 | click here |
| didymella macrostoma | No | species | eukaryota | plants | species | 73002 | click here |
| diplocarpon mali | No | species | eukaryota | plants | species | 946123 | click here |
| diplodia bulgarica | No | species | eukaryota | plants | species | 856259 | click here |
| diplodia intermedia | No | species | eukaryota | plants | species | 856260 | click here |
| diplodia mutila | No | species | eukaryota | plants | species | 85927 | click here |
| diplodia seriata | No | species | eukaryota | plants | species | 420778 | click here |
| epicoccum nigrum | No | species | eukaryota | plants | species | 105696 | click here |
| erwinia amylovora | No | species | bacteria | bacteria | species | 552 | click here |
| erwinia rhapontici | No | species | bacteria | bacteria | species | 55212 | click here |
| erwinia sp. be20 | No | no rank | | | species | 1001615 | click here |
| erwinia sp. be21 | No | no rank | | | species | 1001616 | click here |
| erwinia sp. be7 | No | no rank | | | species | 1001617 | click here |
| exopassalora sp. | No | species | | | species | 2059834 | click here |
| fusarium equiseti | No | species | eukaryota | plants | species | 61235 | click here |
| fusarium lateritium | No | species | eukaryota | plants | species | 5523 | click here |
| gibbsiella quercinecans | No | species | bacteria | bacteria | species | 929813 | click here |
| glyphium elatum | No | species | eukaryota | plants | species | 156302 | click here |
| gymnosporangium clavipes | No | species | eukaryota | plants | species | 45217 | click here |
| gymnosporangium globosum | No | species | | | species | 1086058 | click here |
| gymnosporangium juniperi-virginianae | No | species | eukaryota | plants | species | 198655 | click here |
| gymnosporangium yamadae | No | species | eukaryota | plants | species | 646405 | click here |
| hoplocampa marlatti | No | species | eukaryota | invertebrates | species | 362142 | click here |
| houjia pomigena | No | species | | | species | 718337 | click here |
| inonotus hispidus | No | species | eukaryota | plants | species | 40469 | click here |
| lactococcus lactis | No | species | bacteria | bacteria | species | 1358 | click here |
| leuconostoc mesenteroides | No | species | bacteria | bacteria | species | 1245 | click here |
| macrophomina phaseolina | No | species | eukaryota | plants | species | 35725 | click here |
| metschnikowia fructicola | No | species | eukaryota | plants | species | 178747 | click here |
| metschnikowia sp. | No | species | | | species | 1780086 | click here |
| monilinia fructigena | No | species | eukaryota | plants | species | 38457 | click here |
| nectria sp. imi-378800 | No | no rank | eukaryota | plants | species | 78407 | click here |
| neofabraea kienholzii | No | species | | | species | 1638591 | click here |
| neofabraea malicorticis | No | species | eukaryota | plants | species | 108569 | click here |
| neofabraea perennans | No | species | eukaryota | plants | species | 143941 | click here |
| neofabraea vagabunda | No | species | eukaryota | plants | species | 108571 | click here |
| neofusicoccum luteum | No | species | eukaryota | plants | species | 120395 | click here |
| neofusicoccum parvum | No | species | eukaryota | plants | species | 310453 | click here |
| neonectria ditissima | No | species | eukaryota | plants | species | 78410 | click here |
| neonectria galligena | No | species | eukaryota | plants | species | 56674 | click here |
| neoseiulus californicus | No | species | eukaryota | invertebrates | species | 84382 | click here |
| oligoporus balsameus | No | species | eukaryota | plants | species | 81048 | click here |
| paraconiothyrium fuscomaculans | No | species | eukaryota | plants | species | 565431 | click here |
| paramycosphaerella sp. b jzg-2017 | No | no rank | | | species | 2059748 | click here |
| pezicula corticola | No | species | eukaryota | plants | species | 108561 | click here |
| phaeobotryon negundinis | No | species | | | species | 1833759 | click here |
| phaeothecoidiella illinoisensis | No | species | eukaryota | plants | species | 718272 | click here |
| phaeothecoidiella missouriensis | No | species | eukaryota | plants | species | 718273 | click here |
| phellinus igniarius | No | species | eukaryota | plants | species | 40472 | click here |
| phoma herbarum | No | species | eukaryota | plants | species | 73001 | click here |
| phomopsis fukushii | No | species | eukaryota | plants | species | 311452 | click here |
| phomopsis sp. fau 483 | No | no rank | eukaryota | plants | no rank | 159518 | click here |
| phomopsis sp. pho01 | No | no rank | eukaryota | plants | species | 984002 | click here |
| phomopsis sp. pho02 | No | no rank | eukaryota | plants | species | 984003 | click here |
| phytophthora cactorum | No | species | eukaryota | plants | species | 29920 | click here |
| phytophthora cambivora | No | species | eukaryota | plants | species | 53983 | click here |
| phytophthora megasperma | No | species | eukaryota | plants | species | 4788 | click here |
| phytophthora rosacearum | No | species | eukaryota | plants | species | 244167 | click here |
| phytophthora syringae | No | species | eukaryota | plants | species | 67594 | click here |
| pleurotus dryinus | No | species | eukaryota | plants | species | 28993 | click here |