| achromobacter sp. root170 | Yes | no rank | | | species | 1736480 | click here |
| achromobacter sp. root565 | Yes | no rank | | | species | 1736564 | click here |
| achromobacter sp. root83 | Yes | no rank | | | species | 1736602 | click here |
| achromobacter spanius | Yes | species | bacteria | bacteria | species | 217203 | click here |
| achromobacter xylosoxidans | No | species | bacteria | bacteria | species | 85698 | click here |
| acidovorax sp. leaf160 | Yes | no rank | | | species | 1736280 | click here |
| acidovorax sp. leaf191 | Yes | no rank | | | species | 1736296 | click here |
| acidovorax sp. leaf76 | Yes | no rank | | | species | 1736236 | click here |
| acidovorax sp. leaf78 | Yes | no rank | | | species | 1736237 | click here |
| acidovorax sp. leaf84 | Yes | no rank | | | species | 1736240 | click here |
| acidovorax sp. root217 | Yes | no rank | | | species | 1736492 | click here |
| acidovorax sp. root219 | Yes | no rank | | | species | 1736493 | click here |
| acidovorax sp. root267 | Yes | no rank | | | species | 1736505 | click here |
| acidovorax sp. root275 | Yes | no rank | | | species | 1736508 | click here |
| acidovorax sp. root402 | Yes | no rank | | | species | 1736527 | click here |
| acidovorax sp. root568 | Yes | no rank | | | species | 1736565 | click here |
| acidovorax sp. root70 | Yes | no rank | | | species | 1736590 | click here |
| acinetobacter sp. | Yes | species | bacteria | bacteria | species | 472 | click here |
| acinetobacter sp. leaf130 | Yes | no rank | | | species | 1736269 | click here |
| acinetobacter sp. root1280 | Yes | no rank | | | species | 1736444 | click here |
| acremonium persicinum | Yes | species | eukaryota | plants | species | 5051 | click here |
| aeromicrobium sp. leaf245 | Yes | no rank | | | species | 1736306 | click here |
| aeromicrobium sp. leaf272 | Yes | no rank | | | species | 1736317 | click here |
| aeromicrobium sp. leaf289 | Yes | no rank | | | species | 1736324 | click here |
| aeromicrobium sp. leaf291 | Yes | no rank | | | species | 1736325 | click here |
| aeromicrobium sp. root236 | Yes | no rank | | | species | 1736498 | click here |
| aeromicrobium sp. root344 | Yes | no rank | | | species | 1736521 | click here |
| aeromicrobium sp. root472d3 | Yes | no rank | | | species | 1736540 | click here |
| aeromicrobium sp. root495 | Yes | no rank | | | species | 1736550 | click here |
| afipia sp. root123d2 | Yes | no rank | | | species | 1736436 | click here |
| agreia sp. leaf210 | Yes | no rank | | | species | 1735682 | click here |
| agreia sp. leaf244 | Yes | no rank | | | species | 1736305 | click here |
| agreia sp. leaf283 | Yes | no rank | | | species | 1736321 | click here |
| agreia sp. leaf335 | Yes | no rank | | | species | 1736340 | click here |
| agrobacterium tumefaciens | No | species | bacteria | bacteria | species | 358 | click here |
| agrobacterium tumefaciens | Yes | species | bacteria | bacteria | species | 358 | click here |
| agromyces sp. leaf222 | Yes | no rank | | | species | 1735688 | click here |
| agromyces sp. root1464 | Yes | no rank | | | species | 1736467 | click here |
| agromyces sp. root81 | Yes | no rank | | | species | 1736601 | click here |
| agromyces sp. soil535 | Yes | no rank | | | species | 1736390 | click here |
| albugo candida | Yes | species | eukaryota | plants | species | 65357 | click here |
| albugo laibachii | Yes | species | eukaryota | plants | species | 653948 | click here |
| altererythrobacter sp. root672 | Yes | no rank | | | species | 1736584 | click here |
| alternaria sp. | Yes | species | | | species | 1715220 | click here |
| alternaria sp. 8135 gp-2013 | Yes | no rank | | | species | 1343944 | click here |
| alternaria sp. 8153 gp-2013 | Yes | no rank | | | species | 1343950 | click here |
| alternaria sp. 8166 gp-2013 | Yes | no rank | | | species | 1343947 | click here |
| alternaria sp. 8185 gp-2013 | Yes | no rank | | | species | 1343941 | click here |
| alternaria sp. 820 gp-2013 | Yes | no rank | | | species | 1343940 | click here |
| alternaria sp. 832 gp-2013 | Yes | no rank | | | species | 1343945 | click here |
| alternaria sp. 838 gp-2013 | Yes | no rank | | | species | 1343942 | click here |
| alternaria sp. 856 gp-2013 | Yes | no rank | | | species | 1343946 | click here |
| alternaria sp. 859 gp-2013 | Yes | no rank | | | species | 1343949 | click here |
| alternaria sp. 860 gp-2013 | Yes | no rank | | | species | 1343943 | click here |
| alternaria sp. 896 gp-2013 | Yes | no rank | | | species | 1343948 | click here |
| aminobacter sp. root100 | Yes | no rank | | | species | 1736420 | click here |
| angustibacter sp. root456 | Yes | no rank | | | species | 1736539 | click here |
| arabidopsis halleri partitivirus 1 | Yes | species | | | species | 1849335 | click here |
| arabidopsis latent virus-1 | Yes | species | | | species | 2570606 | click here |
| arthrobacter sp. 968 | Yes | no rank | | | species | 1415750 | click here |
| arthrobacter sp. leaf137 | Yes | no rank | | | species | 1736271 | click here |
| arthrobacter sp. leaf141 | Yes | no rank | | | species | 1736273 | click here |
| arthrobacter sp. leaf145 | Yes | no rank | | | species | 1736274 | click here |
| arthrobacter sp. leaf234 | Yes | no rank | | | species | 1736303 | click here |
| arthrobacter sp. leaf337 | Yes | no rank | | | species | 1736342 | click here |
| arthrobacter sp. leaf69 | Yes | no rank | | | species | 1736232 | click here |
| arthrobacter sp. soil736 | Yes | no rank | | | species | 1736395 | click here |
| arthrobacter sp. soil761 | Yes | no rank | | | species | 1736400 | click here |
| arthrobacter sp. soil762 | Yes | no rank | | | species | 1736401 | click here |
| arthrobacter sp. soil763 | Yes | no rank | | | species | 1736402 | click here |
| arthrobacter sp. soil764 | Yes | no rank | | | species | 1736403 | click here |
| arthrobacter sp. soil782 | Yes | no rank | | | species | 1736410 | click here |
| ascomycota sp. | Yes | species | | | species | 1709939 | click here |
| aurantimonas sp. leaf443 | Yes | no rank | | | species | 1736378 | click here |
| aureimonas sp. leaf324 | Yes | no rank | | | species | 1736336 | click here |
| aureimonas sp. leaf427 | Yes | no rank | | | species | 1736375 | click here |
| aureimonas sp. leaf454 | Yes | no rank | | | species | 1736381 | click here |
| aureimonas sp. leaf460 | Yes | no rank | | | species | 1736384 | click here |
| bacillus amyloliquefaciens | Yes | species | bacteria | bacteria | species | 1390 | click here |
| bacillus sp. | Yes | species | bacteria | bacteria | species | 1409 | click here |
| bacillus sp. leaf13 | Yes | no rank | | | species | 1736211 | click here |
| bacillus sp. leaf406 | Yes | no rank | | | species | 1736368 | click here |
| bacillus sp. leaf49 | Yes | no rank | | | species | 1736222 | click here |
| bacillus sp. leaf75 | Yes | no rank | | | species | 1736235 | click here |
| bacillus sp. root11 | Yes | no rank | | | species | 1736425 | click here |
| bacillus sp. root131 | Yes | no rank | | | species | 1736451 | click here |
| bacillus sp. root147 | Yes | no rank | | | species | 1736468 | click here |
| bacillus sp. root239 | Yes | no rank | | | species | 1736499 | click here |
| bacillus sp. root920 | Yes | no rank | | | species | 1736608 | click here |
| bacillus sp. soil531 | Yes | no rank | | | species | 1736389 | click here |
| bacillus sp. soil745 | Yes | no rank | | | species | 1736396 | click here |
| bacillus sp. soil768d1 | Yes | no rank | | | species | 1736405 | click here |
| bacillus subtilis | Yes | species | bacteria | bacteria | species | 1423 | click here |
| bacillus subtilis subsp. subtilis | Yes | subspecies | bacteria | bacteria | subspecies | 135461 | click here |
| bacillus thuringiensis | Yes | species | bacteria | bacteria | species | 1428 | click here |
| bacterium 4(2011) | Yes | no rank | | | species | 1116246 | click here |
| bacterium k1(2011) | Yes | no rank | | | species | 1116245 | click here |
| bacterium l12(2011b) | Yes | no rank | | | species | 1116252 | click here |
| bacterium l15(2011b) | Yes | no rank | | | species | 1116253 | click here |
| bacterium l8(2011b) | Yes | no rank | | | species | 1116250 | click here |