| acetobacter pasteurianus | Yes | species | bacteria | bacteria | species | 438 | click here |
| alternaria alternata | Yes | species | eukaryota | plants | species | 5599 | click here |
| alternaria aragakii | Yes | species | | | species | 1187902 | click here |
| alternaria jacinthicola | Yes | species | | | species | 1579463 | click here |
| alternaria passiflorae | Yes | species | eukaryota | plants | species | 378260 | click here |
| alternaria porri | Yes | species | eukaryota | plants | species | 48098 | click here |
| alternaria sp. | Yes | species | | | species | 1715220 | click here |
| alternaria tropica | Yes | species | | | species | 1187948 | click here |
| anastrepha pseudoparallela | Yes | species | eukaryota | invertebrates | species | 95517 | click here |
| aspergillus aculeatus | Yes | species | eukaryota | plants | species | 5053 | click here |
| aspergillus europaeus | Yes | no rank | eukaryota | plants | species | 660491 | click here |
| aspergillus flavus | Yes | species | eukaryota | plants | species | 5059 | click here |
| aspergillus niger | Yes | species | eukaryota | plants | species | 5061 | click here |
| azospirillum brasilense | Yes | species | bacteria | bacteria | species | 192 | click here |
| azospirillum formosense | Yes | no rank | bacteria | bacteria | species | 861533 | click here |
| azospirillum lipoferum | Yes | species | bacteria | bacteria | species | 193 | click here |
| bacillus cereus | Yes | species | bacteria | bacteria | species | 1396 | click here |
| bacillus sp. | Yes | species | bacteria | bacteria | species | 1409 | click here |
| bacillus sp. vitmcjk | Yes | no rank | | | species | 1629658 | click here |
| bean yellow mosaic virus | Yes | species | viruses and viroids | viruses | species | 12197 | click here |
| bemisia tabaci | Yes | species | eukaryota | invertebrates | species | 7038 | click here |
| botrytis cinerea | Yes | species | eukaryota | plants | species | 40559 | click here |
| brevibacterium sp. | Yes | no rank | bacteria | bacteria | species | 1701 | click here |
| brevipalpus yothersi | Yes | species | | | species | 1754060 | click here |
| candida bombi | Yes | species | eukaryota | plants | species | 45526 | click here |
| candida sorbosivorans | Yes | species | eukaryota | plants | species | 140312 | click here |
| candidatus phytoplasma aurantifolia | Yes | subspecies | bacteria | bacteria | species | 180978 | click here |
| candidatus phytoplasma prunorum | Yes | subspecies | bacteria | bacteria | species | 47565 | click here |
| chaetothyriales sp. bf608b | Yes | no rank | | | species | 1934120 | click here |
| chaetothyriales sp. bf608e | Yes | no rank | | | species | 1934121 | click here |
| chaetothyriales sp. ctey1 | Yes | no rank | | | species | 1934139 | click here |
| chaetothyriales sp. ctey2 | Yes | no rank | | | species | 1934140 | click here |
| chaetothyriales sp. ctey6 | Yes | no rank | eukaryota | plants | species | 980136 | click here |
| chaetothyriales sp. ctey7 | Yes | no rank | eukaryota | plants | species | 980137 | click here |
| chaetothyriales sp. ctey9 | Yes | no rank | | | species | 1934141 | click here |
| citrus-associated rhabdovirus | Yes | isolate | | | isolate | 2754374 | click here |
| cladosporium kenpeggii | Yes | species | | | species | 2016221 | click here |
| cladosporium oxysporum | Yes | species | eukaryota | plants | species | 29919 | click here |
| cladosporium tenuissimum | Yes | species | eukaryota | plants | species | 70808 | click here |
| clover yellow vein virus | Yes | species | viruses and viroids | viruses | species | 12198 | click here |
| colletotrichum boninense | Yes | species | eukaryota | plants | species | 200359 | click here |
| colletotrichum brasiliense | Yes | species | | | species | 1206799 | click here |
| colletotrichum brevisporum | Yes | species | | | species | 1125787 | click here |
| colletotrichum camelliae | Yes | species | eukaryota | plants | species | 538528 | click here |
| colletotrichum capsici | Yes | species | eukaryota | plants | species | 5456 | click here |
| colletotrichum colombiense | Yes | species | | | species | 1206801 | click here |
| colletotrichum communis | Yes | species | | | species | 1808961 | click here |
| colletotrichum dematium | Yes | species | eukaryota | plants | species | 34405 | click here |
| colletotrichum fructicola | Yes | species | eukaryota | plants | species | 690256 | click here |
| colletotrichum gloeosporioides | Yes | species | eukaryota | plants | species | 474922 | click here |
| colletotrichum kahawae | Yes | species | eukaryota | plants | species | 34407 | click here |
| colletotrichum karstii | Yes | species | | | species | 1095194 | click here |
| colletotrichum magnum | Yes | species | eukaryota | plants | species | 90344 | click here |
| colletotrichum queenslandicum | Yes | species | | | species | 1215733 | click here |
| colletotrichum siamense | Yes | species | eukaryota | plants | species | 690259 | click here |
| colletotrichum sp. | Yes | species | eukaryota | plants | species | 34409 | click here |
| colletotrichum sp. itcc 4970 | Yes | no rank | | | species | 1210741 | click here |
| colletotrichum sp. itcc 6178 | Yes | no rank | | | species | 1210777 | click here |
| colletotrichum sp. pass-103 | Yes | no rank | eukaryota | plants | species | 328368 | click here |
| colletotrichum sp. pass-33 | Yes | no rank | eukaryota | plants | species | 328369 | click here |
| colletotrichum sp. pass-35 | Yes | no rank | eukaryota | plants | species | 210424 | click here |
| colletotrichum sp. pass-52 | Yes | no rank | eukaryota | plants | species | 328372 | click here |
| colletotrichum sp. pass-55 | Yes | no rank | eukaryota | plants | species | 328366 | click here |
| colletotrichum sp. pass-62 | Yes | no rank | eukaryota | plants | species | 328370 | click here |
| colletotrichum sp. pass-65 | Yes | no rank | eukaryota | plants | species | 328367 | click here |
| colletotrichum sp. pass-67 | Yes | no rank | eukaryota | plants | species | 328374 | click here |
| colletotrichum theobromicola | Yes | species | eukaryota | plants | species | 912112 | click here |
| colletotrichum torulosum | Yes | species | | | species | 1206811 | click here |
| colletotrichum tropicale | Yes | species | eukaryota | plants | species | 912113 | click here |
| colletotrichum truncatum | Yes | species | eukaryota | plants | species | 5467 | click here |
| corynespora cassiicola | Yes | species | eukaryota | plants | species | 59586 | click here |
| cotton leaf curl multan betasatellite | Yes | species | viruses and viroids | viruses | species | 306025 | click here |
| cotton leaf curl multan virus | Yes | species | viruses and viroids | viruses | species | 223252 | click here |
| cowpea aphid-borne mosaic virus | Yes | species | viruses and viroids | viruses | species | 12199 | click here |
| cucumber mosaic virus | Yes | species | viruses and viroids | viruses | species | 12305 | click here |
| cucurbit aphid-borne yellows virus | Yes | species | viruses and viroids | viruses | species | 91753 | click here |
| curvularia senegalensis | Yes | species | eukaryota | plants | species | 215132 | click here |
| deinococcus sp. | Yes | no rank | bacteria | bacteria | species | 47478 | click here |
| dermacoccus sp. | Yes | species | | | species | 1871615 | click here |
| diaporthe eres | Yes | species | eukaryota | plants | species | 83184 | click here |
| diaporthe infecunda | Yes | species | | | species | 1303584 | click here |
| diaporthe passiflorae | Yes | species | | | species | 1196422 | click here |
| diaporthe phaseolorum | Yes | species | eukaryota | plants | species | 36923 | click here |
| diaporthe sp. | Yes | species | | | species | 1756133 | click here |
| diaporthe tectonae | Yes | species | | | species | 1856116 | click here |
| diaporthe tectonendophytica | Yes | species | | | species | 1856117 | click here |
| diaporthe unshiuensis | Yes | species | | | species | 1705999 | click here |
| didymella viburnicola | Yes | species | eukaryota | plants | species | 749878 | click here |
| east asian passiflora distortion virus | Yes | species | | | species | 2094113 | click here |
| east asian passiflora distortion virus | Yes | species | | | species | 2734556 | click here |
| east asian passiflora virus | Yes | species | viruses and viroids | viruses | species | 341167 | click here |
| eueides isabella | Yes | species | eukaryota | invertebrates | species | 33448 | click here |
| euphorbia leaf curl virus | Yes | species | viruses and viroids | viruses | species | 270117 | click here |
| euphorbia mosaic virus | Yes | species | viruses and viroids | viruses | species | 77811 | click here |
| filobasidium magnum | Yes | species | eukaryota | plants | species | 104409 | click here |
| fungal endophyte | Yes | species | eukaryota | plants | species | 410823 | click here |
| fungal sp. | Yes | species | | | species | 1709941 | click here |
| fungal sp. e13410c | Yes | no rank | | | species | 1420271 | click here |
| fungal sp. e13410d | Yes | no rank | | | species | 1420272 | click here |
| fungal sp. e13410f | Yes | no rank | | | species | 1420273 | click here |