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new bacteriological patterns in primary infected aorto-iliac aneurysms: a single-centre experience.to assess causative pathogens and surgical outcomes in patients with primary infected aorto-iliac aneurysms at our institution.201020843713
aminoglycoside modifying enzymes.aminoglycosides have been an essential component of the armamentarium in the treatment of life-threatening infections. unfortunately, their efficacy has been reduced by the surge and dissemination of resistance. in some cases the levels of resistance reached the point that rendered them virtually useless. among many known mechanisms of resistance to aminoglycosides, enzymatic modification is the most prevalent in the clinical setting. aminoglycoside modifying enzymes catalyze the modification at ...201020833577
obstacles of multiplex real-time pcr for bacterial 16s rdna: primer specifity and dna decontamination of taq polymerase.background: the detection of a broad range of bacteria by pcr is applied for the screening of blood and blood products with special attention to platelet concentrates. for practical use it is desirable that detection systems include gram-positive, gram-negative and non-gram-stainable bacteria. it is quite challenging to achieve high sensitivity along with a clear negative control with pcr reagents, because especially taq polymerase is contaminated with traces of bacterial dna. methods: bacterial ...201020737013
campylobacter fetus subspecies fetus spondylodiscitis.campylobacter spp. are common causes of gastrointestinal infections. campylobacter fetus is a much rarer pathogen in humans, and usually causes bacteraemia and systemic complications in patients with predisposing conditions. we report a case of spondylodiscitis caused by c. fetus subsp. fetus as revealed by vertebral biopsy culture. this identification was confirmed by sequencing the 16s rrna gene and by phylogenetic analysis. treatment consisted of 6 weeks antimicrobial therapy combined with a ...201020705728
histopathological, immunohistochemical, lectinhistochemical and molecular findings in spontaneous bovine abortions by campylobacter fetus.bovine campylobacteriosis (bc) is a venereal disease caused by campylobacter fetus characterized by temporary infertility with mild endometritis, early embryonic death and occasional abortions. the objectives of this study were to describe and identify c. fetus in spontaneous bovine abortion on the basis of histopathological, immunohistochemical, lectinhistochemical and polymerase chain reaction (pcr) techniques. the most frequent foetal lesion was neutrophilic bronchopneumonia and interstitial ...201120626679
development of loop-mediated isothermal amplification and pcr assays for rapid and simple detection of campylobacter fetus subsp. venerealis.campylobacter fetus is divided into cfv and cff. because cfv causes bovine genital campylobacteriosis, differentiation of the two subspecies is essential to the implementation of efficient cfv control and eradication programs. we have developed lamp and duplex pcr assays for rapid and simple detection of cfv. the lamp assay correctly detected 7 cfv strains and did not detect 53 cff, 35 non-fetus campylobacter and 25 non-campylobacter strains. the pcr assay successfully differentiated the two sub ...201020618686
campylobacter fetus translocation across caco-2 cell monolayers.campylobacter fetus is a recognized pathogen of cattle and sheep, though human infection has also been reported. ingestion of contaminated food or water is a proposed route of transmission for both humans and animals. the subsequent detection of the organism from extra-intestinal and systemic locations implies an ability to translocate across epithelial barriers. to determine how c. fetus disseminates from the intestine, caco-2 cells cultured on porous membrane supports, were used as model intes ...201020600794
occurrence and sequence of sphaeroides heme protein and diheme cytochrome c in purple photosynthetic bacteria in the family rhodobacteraceae.sphaeroides heme protein (shp) was discovered in the purple photosynthetic bacterium, rhodobacter sphaeroides, and is the only known c-type heme protein that binds oxygen. although initially not believed to be widespread among the photosynthetic bacteria, the gene has now been found in more than 40 species of proteobacteria and generally appears to be regulated. rb. sphaeroides is exceptional in not having regulatory genes associated with the operon. we have thus analyzed additional purple bacte ...201020587053
performance of the oxoid m.i.c.evaluator strips compared with the etest assay and bsac agar dilution.the oxoid m.i.c.evaluator (m.i.c.e; thermo fisher scientific) comprises an antibiotic gradient on a plastic support. we compared its performance with etest--a similar product--using bsac agar dilution as a reference.201020562429
rtx proteins: a highly diverse family secreted by a common mechanism.repeats-in-toxin (rtx) exoproteins of gram-negative bacteria form a steadily growing family of proteins with diverse biological functions. their common feature is the unique mode of export across the bacterial envelope via the type i secretion system and the characteristic, typically nonapeptide, glycine- and aspartate-rich repeats binding ca(2+) ions. in this review, we summarize the current state of knowledge on the organization of rtx loci and on the biological and biochemical activities of t ...201020528947
the rdgc protein employs a novel mechanism involving a finger domain to bind to circular dna.the dna-binding protein rdgc has been identified as an inhibitor of reca-mediated homologous recombination in escherichia coli. in neisseria species, rdgc also has a role in virulence-associated antigenic variation. we have previously solved the crystal structure of the e. coli rdgc protein and shown it to form a toroidal dimer. in this study, we have conducted a mutational analysis of residues proposed to mediate interactions at the dimer interfaces. we demonstrate that destabilizing either int ...201020525790
three-hour molecular detection of campylobacter, salmonella, yersinia, and shigella species in feces with accuracy as high as that of culture.campylobacter jejuni and salmonella, shigella, and yersinia species (along with shiga toxin-producing escherichia coli) are the most common causes of acute bacterial diarrheal disease in the united states. current detection techniques are time-consuming, limiting usefulness for patient care. we developed and validated a panel of rapid pcr assays for the detection and identification of c. jejuni, c. coli, salmonella, and yersinia species and shigella and enteroinvasive e. coli in stool samples. a ...201020519461
comparative analysis of sequence periodicity among prokaryotic genomes points to differences in nucleoid structure and a relationship to gene expression.regular spacing of short runs of a or t nucleotides in dna sequences with a period close to the helical period of the dna double helix has been associated with intrinsic dna bending and nucleosome positioning in eukaryotes. analogous periodic signals were also observed in prokaryotic genomes. while the exact role of this periodicity in prokaryotes is not known, it has been proposed to facilitate the dna packaging in the prokaryotic nucleoid and/or to promote negative or positive supercoiling. we ...201020494989
two novel antibiotic resistance genes, tet(44) and ant(6)-ib, are located within a transferable pathogenicity island in campylobacter fetus subsp. fetus.new tetracycline and streptomycin resistance genes, tet(44) and ant(6)-ib, were identified in campylobacter fetus subsp. fetus within a transferable pathogenicity island that is typically unique to campylobacter fetus subsp. venerealis. the 640-amino-acid tetracycline resistance determinant, tet 44, belongs to a class of proteins that confers resistance to tetracycline and minocycline by ribosomal protection. the 286-amino-acid streptomycin resistance determinant, ant(6)-ib, belongs to a family ...201020479200
imipenem-resistant campylobacter fetus bloodstream infection. 201020435578
origin and evolution of peptide-modifying dioxygenases and identification of the wybutosine hydroxylase/hydroperoxidase.unlike classical 2-oxoglutarate and iron-dependent dioxygenases, which include several nucleic acid modifiers, the structurally similar jumonji-related dioxygenase superfamily was only known to catalyze peptide modifications. using comparative genomics methods, we predict that a family of jumonji-related enzymes catalyzes wybutosine hydroxylation/peroxidation at position 37 of eukaryotic trnaphe. identification of this enzyme raised questions regarding the emergence of protein- and nucleic acid- ...201020423905
macrophages recognize size and shape of their targets.recognition by macrophages is a key process in generating immune response against invading pathogens. previous studies have focused on recognition of pathogens through surface receptors present on the macrophage's surface. here, using polymeric particles of different geometries that represent the size and shape range of a variety of bacteria, the importance of target geometry in recognition was investigated. the studies reported here reveal that attachment of particles of different geometries to ...201020386614
recurrent gram-negative bloodstream infection: a 10-year population-based cohort study.recurrent gram-negative bloodstream infection (bsi) has not been evaluated in a population-based setting; therefore, we performed a population-based retrospective cohort study to examine the incidence, recurrence, and mortality rates of gram-negative bsi.201020378069
the hp0256 gene product is involved in motility and cell envelope architecture of helicobacter pylori.helicobacter pylori is the causative agent for gastritis, and peptic and duodenal ulcers. the bacterium displays 5-6 polar sheathed flagella that are essential for colonisation and persistence in the gastric mucosa. the biochemistry and genetics of flagellar biogenesis in h. pylori has not been fully elucidated. bioinformatics analysis suggested that the gene hp0256, annotated as hypothetical, was a flij homologue. in salmonella, flij is a chaperone escort protein for flgn and flit, two proteins ...201020377912
evidence for a lineage of virulent bacteriophages that target campylobacter.our understanding of the dynamics of genome stability versus gene flux within bacteriophage lineages is limited. recently, there has been a renewed interest in the use of bacteriophages as 'therapeutic' agents; a prerequisite for their use in such therapies is a thorough understanding of their genetic complement, genome stability and their ecology to avoid the dissemination or mobilisation of phage or bacterial virulence and toxin genes. campylobacter, a food-borne pathogen, is one of the organi ...201020353581
the internal transcribed spacer region, a new tool for use in species differentiation and delineation of systematic relationships within the campylobacter genus.the campylobacter genus consists of a number of important human and animal pathogens. although the 16s rrna gene has been used extensively for detection and identification of campylobacter species, there is currently limited information on the 23s rrna gene and the internal transcribed spacer (its) region that lies between the 16s and 23s rrna genes. we examined the potential of the 23s rrna gene and the its region to be used in species differentiation and delineation of systematic relationships ...201020348308
modification of the campylobacter jejuni flagellin glycan by the product of the cj1295 homopolymeric-tract-containing gene.the campylobacter jejuni flagellin protein is o-glycosylated with structural analogues of the nine-carbon sugar pseudaminic acid. the most common modifications in the c. jejuni 81-176 strain are the 5,7-di-n-acetylated derivative (pse5ac7ac) and an acetamidino-substituted version (pse5am7ac). other structures detected include o-acetylated and n-acetylglutamine-substituted derivatives (pse5am7ac8oac and pse5am7ac8glnnac, respectively). recently, a derivative of pseudaminic acid modified with a di ...201020338909
campylobacter fetus peritonitis in a patient with an unused embedded subcutaneous peritoneal catheter. 201020200376
spondylodiscitis and an aortic aneurysm due to campylobacter coli.campylobacter coli is a rare cause of bacteremia. we report here the first case of c.coli spondylodiscitis complicated by an aortic aneurysm. outcome was favourable with surgery and antibiotic therapy.201020132561
genetic relationships among reptilian and mammalian campylobacter fetus strains determined by multilocus sequence typing.reptile campylobacter fetus isolates and closely related strains causing human disease were characterized by multilocus sequence typing. they shared approximately 90% nucleotide sequence identity with classical mammalian c. fetus, and there was evidence of recombination among members of these two groups. the reptile group represents a possible separate genomospecies capable of infecting humans.201020053851
development and evaluation of an indirect enzyme-linked immunosorbent assay for the detection of antibodies against campylobacter fetus in cattle.campylobacteriosis is a zoonosis that occurs worldwide. infection with campylobacter fetus (c. fetus) causes infertility and abortion in sheep and cattle. the current study focuses on the sapa gene of c. fetus that encodes surface array proteins and plays an important role in the virulence of c. fetus. the sapa-n (1398bp) and sapa-c (1422bp) fragments were amplified from the c. fetussapa gene using polymerase chain reaction (pcr), and the corresponding recombinant proteins rsapa-n and rsapa-c we ...201020035963
prolonged survival of campylobacter species in bovine manure compost.the persistence of naturally occurring campylobacteria in aerobic compost constructed of manure from beef cattle that were administered chlortetracycline and sulfamethazine (as700) or from cattle not administered antibiotics (control) was examined. although there were no differences in population sizes of heterotrophic bacteria, the temperature of as700 compost was more variable and did not become as high as that of control compost. there were significant differences in water content, total carb ...201020023098
campylobacter cholecystitis.there are 13 cases of campylobacter cholecystitis reported so far in the medical literature. among them, only 4 patients had diarrhea. we report another case of acalculous cholecystitis in a setting of campylobacter enteritis. the case report is followed by a literature review regarding this rare condition.200919960123
a genomic island defines subspecies-specific virulence features of the host-adapted pathogen campylobacter fetus subsp. venerealis.the pathogen campylobacter fetus comprises two subspecies, c. fetus subsp. fetus and c. fetus subsp. venerealis. although these taxa are highly related on the genome level, they are adapted to distinct hosts and tissues. c. fetus subsp. fetus infects a diversity of hosts, including humans, and colonizes the gastrointestinal tract. in contrast, c. fetus subsp. venerealis is largely restricted to the bovine genital tract, causing epidemic abortion in these animals. in light of their close genetic ...201019897645
campylobacter fetus peritonitis and bacteremia in a patient undergoing continuous ambulatory peritoneal dialysis.we report a case of campylobacter fetus peritonitis and bacteremia in a patient undergoing continuous ambulatory peritoneal dialysis.201019889904
vibrios from calves and their serological relation to vibrio fetus.the calf vibrios thus far studied include one strain serologically distinct from the fetal strains. the others are closely related to the fetal strains though not identical with them. the pathogenic characters of the calf vibrios, either as possible descendents of vibrio fetus, or as independent factors in the production of enteritis have not been demonstrated.192719869259
further studies on the etiological significance of vibrio fetus.the general outcome of these six experimental cases and those already reported is that both motile and non-motile types produce disease of the fetal membranes eventually leading to abortion. the more precise serological relations between the two are now under investigation.192319868730
further studies on the etiological role of vibrio fetus.the data bearing on these three cases are quite sufficient to rule out bacillus abortus as the agent. not only the cultures and guinea pig tests of fetal tissues and contents of the digestive tract, but also the agglutination and guinea pig tests of the milk, were negative. the same is true of the agglutination tests of the blood serum. only in one case was the placenta obtained in part. the stained films and the sections from various regions showed no abortion bacilli. guinea pig tests of place ...192019868469
the bacteriology of bovine abortion, with special reference to acquired immunity.in a large herd of dairy cattle and young stock the bacteriological examination of 109 cases of abortion which included a relatively thorough study of the fetus and a study of the membranes, or swabs from the uterus whenever obtainable, gave the following results. 62, or 57 per cent, were associated with bacillus abortus. 26, or 23.8 per cent, were associated with spirilla. 2, or 1.8 per cent, were associated with bacillus pyogenes. 19, or 17.4 per cent, were either sterile or else the digestive ...191919868362
the etiological relation of spirilla (vibrio fetus) to bovine abortion.the isolation in pure culture of a definite morphological entity (vibrio or spirillum) with practically the same biological characters from a series of cases of the same clinical complex (abortion) establishes a presumption in favor of the specific identity of the organisms and also in favor of the inference that such organisms are etiologically related to the diseased condition. this presumption is strengthened by the fact that disease of the fetal membranes followed the injection of pure cultu ...191919868361
some morphological and biological characters of the spirilla (vibrio fetus, n. sp.) associated with disease of the fetal membranes in cattle.twenty-two fetal and two calf strains of spirilla have been studied chiefly with regard to the problem of identity. twenty-one fetal strains are probably specifically the same. one fetal strain differs slightly from these, but in its agglutination affinities it belongs to the same group. of two strains isolated from calves one has definite agglutination relations with the fetal strains, the other none. in the morphological and biological characters so far investigated all the strains agree close ...191919868360
campylobacter fetus subspecies venerealis transport medium for enrichment and pcr. 200919855114
campylobacter fetus cellulitis in an immunocompromised patient: case report and review of the literature.campylobacter fetus is an opportunist gram-negative bacillus. the most frequent clinical manifestation is bacteriemia but it can also be responsable for soft tissue infections, endovascular infections, meningitis, peritonitis and thrombophlebitis. campylobacter fetus cellulitis has been described, but rarely identified in subcutaneous puncture samples. we report a case of an immunocompromised patient with campylobacter fetus bacteriemia associated with a soft tissue infection whose subcutaneous ...200919810424
long-term survival of campylobacter jejuni at low temperatures is dependent on polynucleotide phosphorylase activity.campylobacter jejuni is a leading cause of bacterial gastroenteritis worldwide. infection generally occurs after ingestion of contaminated poultry products, usually conserved at low temperatures. the mechanisms promoting survival of c. jejuni in the cold remain poorly understood despite several investigations. the present study provides insight into the survival mechanism by establishing the involvement of polynucleotide phosphorylase (pnpase), a 3'-5' exoribonuclease with multiple biological fu ...200919801468
functional analysis of the helicobacter pylori flagellar switch proteins.helicobacter pylori uses flagellum-mediated chemotaxis to promote infection. bacterial flagella change rotational direction by changing the state of the flagellar motor via a subcomplex referred to as the switch. intriguingly, the h. pylori genome encodes four switch complex proteins, flim, flin, fliy, and flig, instead of the more typical three of escherichia coli or bacillus subtilis. our goal was to examine whether and how all four switch proteins participate in flagellation. previous work de ...200919767432
the dif/xer recombination systems in proteobacteria.in e. coli, 10 to 15% of growing bacteria produce dimeric chromosomes during dna replication. these dimers are resolved by xerc and xerd, two tyrosine recombinases that target the 28-nucleotide motif (dif) associated with the chromosome's replication terminus. in streptococci and lactococci, an alternative system is composed of a unique, xer-like recombinase (xers) genetically linked to a dif-like motif (dif(sl)) located at the replication terminus. preliminary observations have suggested that t ...200919727445
bilateral internal iliac artery aneurysm infected with campylobacter fetus.this is a case report of a patient with campylobacter fetus involving bilateral internal iliac artery aneurysms. the patient was treated successfully by ligation of the bilateral iliac artery aneurysms and antibiotics. according to a review of the english-language medical literature, this was the first such patient to be reported. a 69-year-old african-american male presented with a past medical history of repair of a 6.6 cm abdominal aortic aneurysm. it had been repaired with a dacron bifurcate ...200919698305
rapid identification of bacterial pathogens using a pcr- and microarray-based assay.during the course of a bacterial infection, the rapid identification of the causative agent(s) is necessary for the determination of effective treatment options. we have developed a method based on a modified broad-range pcr and an oligonucleotide microarray for the simultaneous detection and identification of 12 bacterial pathogens at the species level. the broad-range pcr primer mixture was designed using conserved regions of the bacterial topoisomerase genes gyrb and pare. the primer design a ...200919664269
genomic analysis of campylobacter fetus subspecies: identification of candidate virulence determinants and diagnostic assay targets.campylobacter fetus subspecies venerealis is the causative agent of bovine genital campylobacteriosis, asymptomatic in bulls the disease is spread to female cattle causing extensive reproductive loss. the microbiological and molecular differentiation of c. fetus subsp. venerealis from c. fetus subsp. fetus is extremely difficult. this study describes the analysis of the available c. fetus subsp. venerealis azul-94 strain genome (approximately 75-80%) to identify elements exclusively found in c. ...200919422718
[invasive disease due to campylobacter fetus in an immunocompetent infant]. 200919409252
improving protein extraction and separation methods for investigating the metaproteome of anaerobic benzene communities within sediments.btex compounds such as benzene are frequent soil and groundwater contaminants that are easily biodegraded under oxic conditions by bacteria. in contrast, benzene is rather recalcitrant under anaerobic conditions. the analysis of anoxic degradation is often hampered by difficult sampling conditions, limited amounts of biomass and interference of matrix compounds with proteomic approaches. in order to improve the procedure for protein extraction we established a scheme consisting of the following ...200919381451
characterization of two homologous disulfide bond systems involved in virulence factor biogenesis in uropathogenic escherichia coli cft073.disulfide bond (dsb) formation is catalyzed by disulfide bond proteins and is critical for the proper folding and functioning of secreted and membrane-associated bacterial proteins. uropathogenic escherichia coli (upec) strains possess two paralogous disulfide bond systems: the well-characterized dsbab system and the recently described dsbli system. in the dsbab system, the highly oxidizing dsba protein introduces disulfide bonds into unfolded polypeptides by donating its redox-active disulfide ...200919376849
comparative studies of campylobacter jejuni genomic diversity reveal the importance of core and dispensable genes in the biology of this enigmatic food-borne pathogen.mlst, dna microarrays, and genome sequencing has allowed for a greater understanding of the metabolic capacity and epidemiology of campylobacter jejuni. while strain-specific genes may provide an isolate a selective advantage in environments and contribute to the organism's pathogenicity, recent work indicates that c. jejuni pathogenicity is dictated by variations in the nucleotide sequence of core genes. challenges facing c. jejuni researchers include determining (a) the degree to which genomic ...200919346123
[isolation of campylobacter fetus from persons with obstetric-gynecological infections].campylobacter fetus subspecies fetus is a cause of different obstetric-gynecological diseases. it is a first time when rate of infection with campylobacter was studied and connection between the infection and development of chronic gynecologic diseases and pathology of labor was established. bacteria were isolated and identified in 36.0% +/- 0.7 of studied women admitted to inpatient clinics. it was established that campylobacter fetus subspecies fetus can cause abnormalities in placenta functio ...200919338242
molecular epidemiology and characterization of campylobacter spp. isolated from wild bird populations in northern england.campylobacter infections have been reported at prevalences ranging from 2 to 50% in a range of wild bird species, although there have been few studies that have investigated the molecular epidemiology of campylobacter spp. consequently, whether wild birds are a source of infection in humans or domestic livestock or are mainly recipients of domestic animal strains and whether separate cycles of infection occur remain unknown. to address these questions, serial cross-sectional surveys of wild bird ...200919286781
isolation of campylobacter fetus subspecies fetus in a two-year-old quarterhorse with chronic diarrhea of an undetermined etiology.a 2-year-old quarterhorse was evaluated for chronic diarrhea and weight loss of 5 weeks duration after numerous diagnostic tests failed to identify an underlying cause. historically, the horse was housed at pasture where human household waste vehicles were routinely cleaned and the effluent could run onto the field. physical examination revealed poor body condition and frequent high-volume diarrhea. diagnostic testing for salmonella spp., endoparasites, cryptosporidium spp., clostridium spp., an ...200919286512
production, characterization and determination of the real catalytic properties of the putative 'succinate dehydrogenase' from wolinella succinogenes.both the genomes of the epsilonproteobacteria wolinella succinogenes and campylobacter jejuni contain operons (sdhabe) that encode for so far uncharacterized enzyme complexes annotated as 'non-classical' succinate:quinone reductases (sqrs). however, the role of such an enzyme ostensibly involved in aerobic respiration in an anaerobic organism such as w. succinogenes has hitherto been unknown. we have established the first genetic system for the manipulation and production of a member of the non- ...200919170876
occurrence and characterization of campylobacter in the brazilian production and processing of broilers.twenty-two commercial broiler flocks and their carcasses, totaling 546 samples (450 collected from a poultry farm and 96 from a slaughterhouse), were surveyed for the presence of campylobacter. the positive results for campylobacter among the analyzed samples were homogeneous, yielding 81.8% for cecal droppings, 80.9% for feces, and 80.4% for cloacal swabs. pre-enrichment and direct plating showed that 77.85% and 81.8% of cloacal swabs, respectively, were positive for campylobacter compared to 9 ...200819166063
campylobacter fetus-associated epidural abscess and bacteremia.campylobacter fetus has been isolated as an infrequent cause of abscesses. we report a case of campylobacter fetus epidural abscess and bacteremia in a debilitated elderly man who had a fatal outcome.200919144805
development of a loop-mediated isothermal amplification assay for sensitive and rapid detection of campylobacter fetus.we developed a sensitive and rapid loop-mediated isothermal amplification (lamp) assay for detection of campylobacter fetus. this assay provides simpler and more rapid detection of c. fetus than conventional biochemical and pcr assays. the assay correctly detected 60 c. fetus strains but not 55 non-fetuscampylobacter and 30 non-campylobacter strains. the sensitivity of the lamp assay in pure cultures and in a spiked bovine liver specimen was 10-fold more sensitive than that of the conventional p ...200919128899
increased tlr4 expression in murine placentas after oral infection with periodontal pathogens.maternal periodontitis has emerged as a putative risk factor for preterm births in humans. the periodontitis-associated dental biofilm is thought to serve as an important source of oral bacteria and related virulence factors that hematogenously disseminate and affect the fetoplacental unit; however the underlying biological mechanisms are yet to be fully elucidated. this study hypothesized that an oral infection with the human periodontal pathogens campylobacter rectus and porphyromonas gingival ...200919101032
increased tlr4 expression in murine placentas after oral infection with periodontal pathogens.maternal periodontitis has emerged as a putative risk factor for preterm births in humans. the periodontitis-associated dental biofilm is thought to serve as an important source of oral bacteria and related virulence factors that hematogenously disseminate and affect the fetoplacental unit; however the underlying biological mechanisms are yet to be fully elucidated. this study hypothesized that an oral infection with the human periodontal pathogens campylobacter rectus and porphyromonas gingival ...200919101032
the biofilm forming potential of bacterial species in the genus campylobacter.the biofilm forming abilities of 16 strains representative of 14 of the 16 species comprising the genus campylobacter were determined on glass, stainless steel, and polystyrene plastic. the formation of biofilms has been suggested as a means by which campylobacter is able to persist within an inhospitable environment. of the eight microaerophilic campylobacter species, including two strains each of campylobacter jejuni and campylobacter fetus, only c. jejuni strain 81-176 reliably produced a vis ...200919028304
rapid evolution and the importance of recombination to the gastroenteric pathogen campylobacter jejuni.responsible for the majority of bacterial gastroenteritis in the developed world, campylobacter jejuni is a pervasive pathogen of humans and animals, but its evolution is obscure. in this paper, we exploit contemporary genetic diversity and empirical evidence to piece together the evolutionary history of c. jejuni and quantify its evolutionary potential. our combined population genetics-phylogenetics approach reveals a surprising picture. campylobacter jejuni is a rapidly evolving species, subje ...200919008526
rapid evolution and the importance of recombination to the gastroenteric pathogen campylobacter jejuni.responsible for the majority of bacterial gastroenteritis in the developed world, campylobacter jejuni is a pervasive pathogen of humans and animals, but its evolution is obscure. in this paper, we exploit contemporary genetic diversity and empirical evidence to piece together the evolutionary history of c. jejuni and quantify its evolutionary potential. our combined population genetics-phylogenetics approach reveals a surprising picture. campylobacter jejuni is a rapidly evolving species, subje ...200919008526
campylobacter infection as a trigger for guillain-barré syndrome in egypt.most studies of campylobacter infection triggering guillain-barré syndrome (gbs) are conducted in western nations were campylobacter infection and immunity is relatively rare. in this study, we explored campylobacter infections, campylobacter serotypes, autoantibodies to gangliosides, and gbs in egypt, a country where campylobacter exposure is common.200819002255
demographic determinants for campylobacter infection in england and wales: implications for future epidemiological studies.despite a significant public health burden the epidemiology of human campylobacter infection remains blurred. the identification of demographic determinants for campylobacter infection is therefore essential for identifying potential areas for intervention. demographic data from an active, population-based sentinel surveillance system for campylobacter infection (from 2000 until 2003, n=15 907) were compared with appropriate denominator data from the 2001 united kingdom census. incidence was hig ...200819000328
influence of campylobacter fetus subsp. fetus on ram sperm cell quality.campylobacter fetus subsp. fetus infection can occur in female sheep, causing infertility or abortion. despite extensive research on the effect of these bacteria on female fertility, little research has been done on the influence of c. fetus subsp. fetus on the male factor. our objective was to examine the influence of c. fetus subsp. fetus on ram sperm. motility index, percentage of live spermatozoa, mean alphat value (an indication of the chromatin stability of the sperm cell) and percentage o ...200818927420
the apparent involvement of vibrio fetus in an infection of man. 194818917668
a satisfactory medium for the isolation, cultivation, and maintenance of viability of vibrio fetus (bovine). 194818887830
viability of vibrio fetus in petrolatum. 194818863381
development of a loop-mediated isothermal amplification assay for sensitive and rapid detection of vibrio parahaemolyticus.vibrio parahaemolyticus is a marine seafood-borne pathogen causing gastrointestinal disorders in humans. thermostable direct hemolysin (tdh) and tdh-related hemolysin (trh) are known as major virulence determinants of v. parahaemolyticus. most v. parahaemolyticus isolates from the environment do not produce tdh or trh. total v. parahaemolyticus has been used as an indicator for control of seafood contamination toward prevention of infection. detection of total v. parahaemolyticus using conventio ...200818823567
campylobacter fetus meningitis in a patient with crohn's disease. 200918798576
campylobacter bacteremia: clinical features and factors associated with fatal outcome.campylobacter bacteremia is uncommon. the influence of underlying conditions and of the impact of antibiotics on infection outcome are not known.200818699745
aortoiliac aneurysms infected by campylobacter fetus.few reports of aortoiliac aneurysms infected by campylobacter fetus are available. we report five cases and review previous reports, with a view to describing the clinical pattern, treatment options, and outcome of this infection.200818692356
[infected abdominal aortic aneurysm from campylobacter fetus bacteremia]. 200818681158
necessary corrections to the approved lists of bacterial names according to rule 40d (formerly rule 46). opinion 86.the judicial commission affirms that, according to rule 40d, formerly rule 46, of the bacteriological code, the authorship of a number of subspecies names included on the approved lists of bacterial names must be corrected. these names are acetobacter aceti subsp. aceti, acetobacter pasteurianus subsp. pasteurianus, bacteroides melaninogenicus subsp. melaninogenicus, campylobacter fetus subsp. fetus, mycobacterium chelonae subsp. chelonae, propionibacterium freudenreichii subsp. freudenreichii, ...200818676492
unveiling novel reco distant orthologues involved in homologous recombination.the generation of a reca filament on single-stranded dna is a critical step in homologous recombination. two main pathways leading to the formation of the nucleofilament have been identified in bacteria, based on the protein complexes mediating reca loading: recbcd (addab) and recfor. many bacterial species seem to lack some of the components involved in these complexes. the current annotation of the helicobacter pylori genome suggests that this highly diverse bacterial pathogen has a reduced se ...200818670631
synonymous and nonsynonymous polymorphisms versus divergences in bacterial genomes.comparison of the ratio of nonsynonymous to synonymous polymorphisms within species with the ratio of nonsynonymous to synonymous substitutions between species has been widely used as a supposed indicator of positive darwinian selection, with the ratio of these 2 ratios being designated as a neutrality index (ni). comparison of genome-wide polymorphism within 12 species of bacteria with divergence from an outgroup species showed substantial differences in ni among taxa. a low level of nonsynonym ...200818667439
design and construction of a double inversion recombination switch for heritable sequential genetic memory.inversion recombination elements present unique opportunities for computing and information encoding in biological systems. they provide distinct binary states that are encoded into the dna sequence itself, allowing us to overcome limitations posed by other biological memory or logic gate systems. further, it is in theory possible to create complex sequential logics by careful positioning of recombinase recognition sites in the sequence.200818665232
identification of a gene encoding a transporter essential for utilization of c4 dicarboxylates in corynebacterium glutamicum.the corynebacterium glutamicum r genome contains a total of eight genes encoding proteins with sequence similarity to c4-dicarboxylate transporters identified from other bacteria. three of the genes encode proteins within the dicarboxylate/amino acid:cation symporter (daacs) family, another three encode proteins within the tripartite atp-independent periplasmic transporter family, and two encode proteins within the divalent anion:na+ symporter (dass) family. we observed that a mutant strain defi ...200818586971
[case of bilateral subdural empyema complicating campylobacter fetus subspecies fetus meningitis].campylobacter fetus subspecies fetus (c. fetus) is a relatively rare cause of meningitis, with only 3 cases of c. fetus subdural empyema reported to date. we experienced a case of bilateral subdural empyema complicating c. fetus meningitis. a 51-year-old man was found lying unconscious on a street and was brought to the hospital in an ambulance. he had no past history of any underlying disease but he had suffered head trauma approximately 1 month prior to this episode. on admission, he had high ...200818567362
sensitive and rapid detection of cholera toxin-producing vibrio cholerae using a loop-mediated isothermal amplification.vibrio cholerae is widely acknowledged as one of the most important waterborne pathogen causing gastrointestinal disorders. cholera toxin (ct) is a major virulence determinant of v. cholerae. detection of ct-producing v. cholerae using conventional culture-, biochemical- and immunological-based assays is time-consuming and laborious, requiring more than three days. thus, we developed a novel and highly specific loop-mediated isothermal amplification (lamp) assay for the sensitive and rapid detec ...200818547441
infected aneurysms of bilateral deep femoral arteries due to campylobacter fetus subspecies fetus.infected aneurysms due to campylobacter fetus subspecies fetus have rarely been reported. here, we describe the first case of infected aneurysm of bilateral deep femoral arteries due to c. fetus fetus. we successfully treated this case by administration of antibiotics effective for c. fetus fetus and bilateral obturator bypass with complete resection of the infected aneurysms. the aneurysmal wall culture disclosed the presence of c. fetus fetus in a microaerobic atmosphere after the operation. a ...200818466824
fibronectin enhances campylobacter fetus interaction with extracellular matrix components and int 407 cells.campylobacter fetus is a recognized pathogen of cattle and sheep that can also infect humans. no adhesins specific for c. fetus have to date been identified; however, bacterial attachment is essential to establish an infecting population. scanning electron microscopy revealed c. fetus attachment to the serosal surface of human colonic biopsy explants, a location consistent with the presence of the extracellular matrix (ecm). to determine whether the ecm mediated c. fetus adherence, 7 c. fetus st ...200818388970
sequence variability of campylobacter temperate bacteriophages.prophages integrated within the chromosomes of campylobacter jejuni isolates have been demonstrated very recently. prior work with campylobacter temperate bacteriophages, as well as evidence from prophages in other enteric bacteria, suggests these prophages might have a role in the biology and virulence of the organism. however, very little is known about the genetic variability of campylobacter prophages which, if present, could lead to differential phenotypes in isolates carrying the phages ve ...200818366706
evaluation of 16s rrna gene-based pcr assays for genus-level identification of helicobacter species.the inclusivity, exclusivity, and detection limit of six 16s rrna gene-based helicobacter genus-specific pcr assays were examined. five out of six assays were 100% inclusive, but the tests varied considerably in their exclusivity (9.1 to 95.5%). the clinical detection limit varied between 10(3) and 1 viable bacterial cell per reaction mixture.200818337392
emergence of a tetracycline-resistant campylobacter jejuni clone associated with outbreaks of ovine abortion in the united states.campylobacter infection is one of the major causes of ovine abortions worldwide. historically, campylobacter fetus subsp. fetus was the major cause of campylobacter-associated abortion in sheep; however, campylobacter jejuni is increasingly associated with sheep abortions. we examined the species distribution, genotypes, and antimicrobial susceptibilities of abortion-associated campylobacter isolates obtained from multiple lambing seasons on different farms in iowa, idaho, south dakota, and cali ...200818322054
development of a strain-specific molecular method for quantitating individual campylobacter strains in mixed populations.the identification of sites resulting in cross-contamination of poultry flocks in the abattoir and determination of the survival and persistence of campylobacters at these sites are essential for the development of intervention strategies aimed at reducing the microbial burden on poultry at retail. a novel molecule-based method, using strain- and genus-specific oligonucleotide probes, was developed to detect and enumerate specific campylobacter strains in mixed populations. strain-specific oligo ...200818281428
development and evaluation of immunochromatographic assay for simple and rapid detection of campylobacter jejuni and campylobacter coli in human stool specimens.an immunochromatographic assay (campy-ica) using a newly generated single monoclonal antibody against a 15-kda cell surface protein of campylobacter jejuni was developed. when cell suspensions of 86 c. jejuni strains and 27 campylobacter coli strains were treated with a commercially available bacterial protein extraction reagent and the resulting extracts were tested with the campy-ica, they all yielded positive results. the minimum detectable limits for the c. jejuni strains ranged from 1.8 x 1 ...200818256225
development of a cytolethal distending toxin (cdt) gene-based species-specific multiplex pcr assay for the detection and identification of campylobacter jejuni, campylobacter coli and campylobacter fetus.a cytolethal distending toxin (cdt) gene-based species-specific multiplex pcr assay for the detection of cdta, cdtb or cdtc gene of campylobacter jejuni, campylobacter coli or campylobacter fetus, respectively, was developed and evaluated with 76 campylobacter strains belonging to seven different species and 131 other bacterial strains of eight different genera. the cdta, cdtb or cdtc gene of c. jejuni, c. coli or c. fetus, respectively, could be successfully amplified using the corresponding se ...200818248435
the macaque gut microbiome in health, lentiviral infection, and chronic enterocolitis.the vertebrate gut harbors a vast community of bacterial mutualists, the composition of which is modulated by the host immune system. many gastrointestinal (gi) diseases are expected to be associated with disruptions of host-bacterial interactions, but relatively few comprehensive studies have been reported. we have used the rhesus macaque model to investigate forces shaping gi bacterial communities. we used dna bar coding and pyrosequencing to characterize 141,000 sequences of 16s rrna genes ob ...200818248093
evidence for the involvement of infectious agents in the pathogenesis of crohn's disease.many advances have been made in the understanding of crohn's disease (cd) pathogenesis during the last decade. cd is currently seen as a predominantly t-lymphocyte-driven disease characterized by the presence of a complex cocktail of interacting cytokines, chemokines and other mediators produced by a variety of cell types. prevailing theories of cd pathogenesis suggest that patients' t-lymphocytes are inappropriately activated in the setting of an immune imbalance, which is itself caused by an u ...200818240341
campylobacter fetus infection of an internal cardioverter defibrillator.infection is a serious complication post implantation of an implantable cardiac defibrillator (icd). we report a case of a 77-year-old man who had an icd generator change complicated by a hematoma. the generator became infected at the time of campylobacter fetus bacteremia. the icd was removed and a new device was implanted without complication.200818233985
moraxella osloensis gene expression in the slug host deroceras reticulatum.the bacterium moraxella osloensis is a mutualistic symbiont of the slug-parasitic nematode phasmarhabditis hermaphrodita. in nature, p. hermaphrodita vectors m. osloensis into the shell cavity of the slug host deroceras reticulatum in which the bacteria multiply and kill the slug. as m. osloensis is the main killing agent, genes expressed by m. osloensis in the slug are likely to play important roles in virulence. studies on pathogenic interactions between bacteria and lower order hosts are few, ...200818226222
arthritis risk after acute bacterial gastroenteritis.reactive arthritis (rea) may occur from bacterial gastroenteritis. we studied the risk of arthritis after an outbreak of escherichia coli o157:h7 and campylobacter species within a regional drinking water supply to examine the relationship between the severity of acute diarrhoea and subsequent symptoms of arthritis.200818184664
computational biology in argentina. 200718166076
retrospective study of campylobacter infection in a zoological collection.little is known about the epidemiology of campylobacter spp. in wild animal populations. however, zoological collections can provide valuable insights. using records from the zoological society of london whipsnade zoo compiled between 1990 and 2003, the roles of a range of biotic and abiotic factors associated with the occurrence of campylobacteriosis were investigated. the occurrence of campylobacteriosis varied widely across host taxonomic orders. furthermore, in mammals, a combination of chan ...200818165368
retrospective study of campylobacter infection in a zoological collection.little is known about the epidemiology of campylobacter spp. in wild animal populations. however, zoological collections can provide valuable insights. using records from the zoological society of london whipsnade zoo compiled between 1990 and 2003, the roles of a range of biotic and abiotic factors associated with the occurrence of campylobacteriosis were investigated. the occurrence of campylobacteriosis varied widely across host taxonomic orders. furthermore, in mammals, a combination of chan ...200818165368
the complete genome sequence and analysis of the epsilonproteobacterium arcobacter butzleri.arcobacter butzleri is a member of the epsilon subdivision of the proteobacteria and a close taxonomic relative of established pathogens, such as campylobacter jejuni and helicobacter pylori. here we present the complete genome sequence of the human clinical isolate, a. butzleri strain rm4018.200718159241
wide geographical distribution of internationally rare campylobacter clones within new zealand.during the southern hemisphere winter of 2006 new zealand experienced a significant increase in the number of reported cases of campylobacter infection. in total, 112 campylobacter isolates from eight district health boards (dhbs) located across new zealand were submitted for pfge, mlst and penner serotyping analysis. distinct clusters of campylobacter isolates were identified, several of which were composed of isolates from up to five different dhbs located on both the north and south islands o ...200818028582
wide geographical distribution of internationally rare campylobacter clones within new zealand.during the southern hemisphere winter of 2006 new zealand experienced a significant increase in the number of reported cases of campylobacter infection. in total, 112 campylobacter isolates from eight district health boards (dhbs) located across new zealand were submitted for pfge, mlst and penner serotyping analysis. distinct clusters of campylobacter isolates were identified, several of which were composed of isolates from up to five different dhbs located on both the north and south islands o ...200818028582
campylobacter fetus bloodstream infection: risk factors and clinical features.in this paper, we report 21 cases of campylobacter fetus bloodstream infection observed in our institution over a 9-year period. the median age of the patients was 78 years. most of them (62%) had a significant underlying disease, such as diabetes, immunodeficiency or cardiovascular disease. the main clinical features were fever with (62% of cases) or without (38%) extra-intestinal symptoms. these included mycotic aneurysm of the abdominal aorta (24%) and cellulitis (19%). antibiotic treatment w ...200817999095
house-level risk factors associated with the colonization of broiler flocks with campylobacter spp. in iceland, 2001 - 2004.the concurrent rise in consumption of fresh chicken meat and human campylobacteriosis in the late 1990's in iceland led to a longitudinal study of the poultry industry to identify the means to decrease the frequency of broiler flock colonization with campylobacter. because horizontal transmission from the environment is thought to be the most likely source of campylobacter to broilers, we aimed to identify broiler house characteristics and management practices associated with flock colonization. ...200717997846
development of a multiplex pcr assay for identification of campylobacter coli, campylobacter fetus, campylobacter hyointestinalis subsp. hyointestinalis, campylobacter jejuni, campylobacter lari and campylobacter upsaliensis.a multiplex pcr assay has been developed for the identification of the six common campylobacter taxa associated with human gastroenteritis and/or septicaemia, namely campylobacter coli, campylobacter fetus, campylobacter hyointestinalis subsp. hyointestinalis, campylobacter jejuni, campylobacter lari and campylobacter upsaliensis. the assay was developed using a combination of newly designed and published primers. it provided a specific pcr product for each of the five campylobacter species and ...200717965346
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