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genome-wide analysis of alternative splicing landscapes modulated during plant-virus interactions in brachypodium distachyon.in eukaryotes, alternative splicing (as) promotes transcriptome and proteome diversity. the extent of genome-wide as changes occurring during a plant-microbe interaction is largely unknown. here, using high-throughput, paired-end rna sequencing, we generated an isoform-level spliceome map of brachypodium distachyon infected with panicum mosaic virus and its satellite virus. overall, we detected ∼44,443 transcripts in b. distachyon, ∼30% more than those annotated in the reference genome. expressi ...201525634987
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