| influenza a virus (a/aquatic bird/korea/w44/2005(h7n3)) | no rank | viruses | no rank | viruses | 947939 |
| influenza a virus (a/canine/colorado/148902/2006(h3n8)) | no rank | viruses | no rank | viruses | 948588 |
| influenza a virus (a/duck/egypt/0897-nlqp/2008(h5n1)) | no rank | viruses | no rank | viruses | 947381 |
| influenza a virus (a/australia/wmh29/2009(h1n1)) | no rank | viruses | no rank | viruses | 946694 |
| influenza a virus (a/australia/wmh31/2009(h1n1)) | no rank | viruses | no rank | viruses | 946695 |
| influenza a virus (a/australia/wmh32/2009(h1n1)) | no rank | viruses | no rank | viruses | 946696 |
| influenza a virus (a/australia/wmh33/2009(h1n1)) | no rank | viruses | no rank | viruses | 946697 |
| influenza a virus (a/mallard/korea/knu yp09/2009(h1n1)) | no rank | viruses | no rank | viruses | 946710 |
| rotavirus hu/r792/bra/2005/g9 | no rank | viruses | no rank | viruses | 948989 |
| rotavirus hu/r840/bra/2005/g9 | no rank | viruses | no rank | viruses | 948990 |
| rotavirus hu/r848/bra/2005/g9 | no rank | viruses | no rank | viruses | 948991 |
| orsay virus | species | viruses | species | viruses | 977912 |
| santeuil nodavirus | species | viruses | species | viruses | 977913 |
| influenza a virus (a/chicken/vietnam/2/2010(h5n1)) | no rank | viruses | no rank | viruses | 977844 |
| influenza a virus (a/duck/vietnam/8/2010(h5n1)) | no rank | viruses | no rank | viruses | 977845 |
| influenza a virus (a/duck/vietnam/7/2010(h5n1)) | no rank | viruses | no rank | viruses | 977846 |
| influenza a virus (a/chicken/vietnam/4/2010(h5n1)) | no rank | viruses | no rank | viruses | 977847 |
| vibrio phage icp1 | no rank | viruses | species | phages | 979525 |
| vibrio phage icp1_2001_a | no rank | viruses | no rank | phages | 979526 |
| vibrio phage icp1_2004_a | no rank | viruses | no rank | phages | 979527 |
| norovirus water/gi.4/09-11-30a/2009/zaf | no rank | viruses | no rank | viruses | 983465 |
| norovirus water/gi.5/08-11-17a-rv2/2008/zaf | no rank | viruses | no rank | viruses | 983466 |
| norovirus water/gi.5/09-03-09-rv2/2009/zaf | no rank | viruses | no rank | viruses | 983467 |
| norovirus water/gi.5/09-08-03a/2009/zaf | no rank | viruses | no rank | viruses | 983468 |
| norovirus water/gii.17/08-06-02a/2008/zaf | no rank | viruses | no rank | viruses | 983481 |
| norovirus water/gii.17/09-10-12c-rv2/2009/zaf | no rank | viruses | no rank | viruses | 983482 |
| norovirus water/gii.2/08-10-27/2008/zaf | no rank | viruses | no rank | viruses | 983483 |
| norovirus water/gii.3/09-10-12b-rv2/2009/zaf | no rank | viruses | no rank | viruses | 983484 |
| influenza a virus (a/swine/minnesota/a01047613/2010(h1n1)) | no rank | viruses | no rank | viruses | 983888 |
| parvovirus usp400-2b/brazil/2010 | no rank | viruses | species | viruses | 984279 |
| parvovirus usp400-4b/brazil/2010 | no rank | viruses | species | viruses | 984280 |
| parvovirus usp400-8a/brazil/2010 | no rank | viruses | species | viruses | 984281 |
| parvovirus usp400-9a/brazil/2010 | no rank | viruses | species | viruses | 984282 |
| chaerephon bat coronavirus/kenya/ky22/2006 | no rank | viruses | species | viruses | 983929 |
| influenza a virus (a/vienna/25/2007(h3n2)) | no rank | viruses | no rank | viruses | 985822 |
| influenza a virus (a/vienna/28/2006(h3n2)) | no rank | viruses | no rank | viruses | 985823 |
| influenza a virus (a/denmark/118/2010(h1n1)) | no rank | viruses | no rank | viruses | 985062 |
| influenza a virus (a/denmark/120/2010(h1n1)) | no rank | viruses | no rank | viruses | 985063 |
| influenza a virus (a/denmark/19/2011(h1n1)) | no rank | viruses | no rank | viruses | 985064 |
| influenza a virus (a/bogota/wrair0440t/2009(h1n1)) | no rank | viruses | no rank | viruses | 985903 |
| influenza a virus (a/bogota/wrair0442t/2009(h1n1)) | no rank | viruses | no rank | viruses | 985904 |
| influenza a virus (a/lima/wrair0519f/2009(h1n1)) | no rank | viruses | no rank | viruses | 985905 |
| influenza a virus (a/piura/wrair0603f/2009(h1n1)) | no rank | viruses | no rank | viruses | 985906 |
| influenza a virus (a/new jersey/wrair1506p/2009(h1n1)) | no rank | viruses | no rank | viruses | 985920 |
| influenza a virus (a/california/wrair1507p/2009(h1n1)) | no rank | viruses | no rank | viruses | 985921 |
| influenza a virus (a/guam/wrair1510p/2009(h1n1)) | no rank | viruses | no rank | viruses | 985922 |
| influenza a virus (a/virginia/wrair1511p/2009(h1n1)) | no rank | viruses | no rank | viruses | 985923 |
| influenza a virus (a/san diego/wrair1658p/2009(h1n1)) | no rank | viruses | no rank | viruses | 985938 |
| influenza a virus (a/south carolina/wrair1660p/2009(h1n1)) | no rank | viruses | no rank | viruses | 985939 |
| influenza a virus (a/pendleton/wrair1661p/2009(h1n1)) | no rank | viruses | no rank | viruses | 985940 |
| influenza a virus (a/san diego/wrair1662p/2009(h1n1)) | no rank | viruses | no rank | viruses | 985941 |
| influenza a virus (a/managua/wrair1693p/2009(h1n1)) | no rank | viruses | no rank | viruses | 985956 |
| influenza a virus (a/piura/wrair1694p/2009(h1n1)) | no rank | viruses | no rank | viruses | 985957 |
| influenza a virus (a/lima/wrair1695p/2009(h1n1)) | no rank | viruses | no rank | viruses | 985958 |
| influenza a virus (a/mexico city/wrair1752n/2010(h1n1)) | no rank | viruses | no rank | viruses | 985960 |
| terra1 virus | species | viruses | species | viruses | 985781 |
| moumouvirus | species | viruses | species | viruses | 985782 |
| tomato mottle leaf curl zulia virus | no rank | viruses | no rank | viruses | 979781 |
| influenza a virus (a/human/norway/a5ns/2009(h1n1)) | no rank | viruses | no rank | viruses | 979804 |
| influenza a virus (a/human/norway/a5s/2009(h1n1)) | no rank | viruses | no rank | viruses | 979805 |
| influenza a virus (a/thailand/cu-c1151/2010(h1n1)) | no rank | viruses | no rank | viruses | 980096 |
| influenza a virus (a/thailand/cu-c1157/2010(h1n1)) | no rank | viruses | no rank | viruses | 980097 |
| influenza a virus (a/thailand/cu-c1006/2010(h1n1)) | no rank | viruses | no rank | viruses | 980098 |
| influenza a virus (a/thailand/cu-h1774/2010(h1n1)) | no rank | viruses | no rank | viruses | 980099 |
| influenza a virus (a/thailand/cu-h2364/2010(h1n1)) | no rank | viruses | no rank | viruses | 980113 |
| influenza a virus (a/thailand/cu-h2079/2010(h1n1)) | no rank | viruses | no rank | viruses | 980114 |
| influenza a virus (a/mallard/ohio/556/1987(mixed)) | no rank | viruses | no rank | viruses | 979853 |
| influenza a virus (a/mallard/ohio/662/2002(mixed)) | no rank | viruses | no rank | viruses | 979854 |
| influenza a virus (a/green-winged teal/ohio/196/1999(mixed)) | no rank | viruses | no rank | viruses | 979855 |
| influenza a virus (a/mallard/alaska/312/2005(mixed)) | no rank | viruses | no rank | viruses | 979856 |
| ugandan cassava brown streak virus-[malawi:salima 60:2009] | no rank | viruses | no rank | viruses | 980530 |
| ugandan cassava brown streak virus-[mw:mangochi 66:2009] | no rank | viruses | no rank | viruses | 980531 |
| ugandan cassava brown streak virus-[uganda:busia 2:2009] | no rank | viruses | no rank | viruses | 980532 |
| ugandan cassava brown streak virus-[uganda:busia 6:2009] | no rank | viruses | no rank | viruses | 980533 |
| influenza a virus (a/swine/england/1382/2010(h1n2)) | no rank | viruses | no rank | viruses | 980864 |
| influenza a virus (a/boston/5/2009(h3n2)) | no rank | viruses | no rank | viruses | 980377 |
| influenza a virus (a/boston/9/2009(h3n2)) | no rank | viruses | no rank | viruses | 980378 |
| influenza a virus (a/swine/nanchang/f9/2010(h1n1)) | no rank | viruses | no rank | viruses | 980040 |
| influenza a virus (a/swine/shandong/n1/2009(h1n1)) | no rank | viruses | no rank | viruses | 980041 |
| influenza a virus (a/whooper swan/hokkaido/4/2011(h5n1)) | no rank | viruses | no rank | viruses | 980042 |
| influenza a virus (a/brussels/ins79/2009(n1)) | no rank | viruses | no rank | viruses | 981340 |
| influenza a virus (a/madrid/ins297/2009(n1)) | no rank | viruses | no rank | viruses | 981341 |
| influenza a virus (a/warsaw/ins99/2009(mixed)) | no rank | viruses | no rank | viruses | 981342 |
| influenza a virus (a/swine/england/73690/2010(h1n1)) | no rank | viruses | no rank | viruses | 981343 |
| influenza a virus (a/swine/england/1389/2010(h1n1)) | no rank | viruses | no rank | viruses | 981344 |
| influenza a virus (a/beijing/3856/2010(h1n1)) | no rank | viruses | no rank | viruses | 981228 |
| influenza a virus (a/beijing/3872/2010(h1n1)) | no rank | viruses | no rank | viruses | 981229 |
| influenza a virus (a/beijing/3884/2010(h1n1)) | no rank | viruses | no rank | viruses | 981230 |
| influenza a virus (a/beijing/3907/2010(h1n1)) | no rank | viruses | no rank | viruses | 981231 |
| soybean vein necrosis virus | no rank | viruses | no rank | viruses | 980895 |
| cerapteryx graminis nucleopolyhedrovirus | species | viruses | species | viruses | 980897 |
| turkey hepatitis virus | species | viruses | species | viruses | 980963 |
| turkey hepatitis virus 2993d | no rank | viruses | no rank | viruses | 980964 |
| turkey hepatitis virus 0091.1 | no rank | viruses | no rank | viruses | 980965 |
| odocoileus hemionus endogenous retrovirus | species | viruses | species | viruses | 980972 |
| norovirus hu/izsbs41/ita/2009/gi.4 | no rank | viruses | no rank | viruses | 981108 |
| norovirus water/izsbs31/ita/2009/gi.4 | no rank | viruses | no rank | viruses | 981109 |
| pseudomonas phage p3_cha | no rank | viruses | species | phages | 981430 |
| pseudomonas phage pak_p3 | no rank | viruses | species | phages | 981431 |
| influenza a virus (a/chicken/indonesia/smiwn18/2009(h5n1)) | no rank | viruses | no rank | viruses | 983294 |