| mammalian orthoreovirus 1 lang | no rank | viruses | no rank | viruses | 10884 |
| mammalian orthoreovirus 2 d5/jones | no rank | viruses | no rank | viruses | 10885 |
| african horse sickness virus 9 | no rank | viruses | no rank | viruses | 10897 |
| bluetongue virus (serotype 10 / american isolate) | no rank | viruses | no rank | viruses | 10900 |
| coltivirus | | | genus | viruses | 10911 |
| rotavirus | | | genus | viruses | 10912 |
| porcine rotavirus | no rank | viruses | no rank | viruses | 10913 |
| porcine rotavirus strain gottfried | no rank | viruses | no rank | viruses | 10917 |
| porcine rotavirus (strain k) | no rank | viruses | no rank | viruses | 10918 |
| bovine rotavirus | no rank | viruses | no rank | viruses | 10927 |
| bovine rotavirus strain b641/g6 | no rank | viruses | no rank | viruses | 10928 |
| bovine rotavirus (serotype 6 / strain 61a) | no rank | viruses | no rank | viruses | 10929 |
| equine rotavirus strain h-2 | no rank | viruses | no rank | viruses | 10939 |
| human rotavirus a | no rank | viruses | no rank | viruses | 10941 |
| human rotavirus (serotype g / strain b37) | no rank | viruses | no rank | viruses | 10949 |
| human rotavirus serotype 1 / strain m37 | no rank | viruses | no rank | viruses | 10954 |
| human rotavirus strain mcn13 | no rank | viruses | no rank | viruses | 10955 |
| human rotavirus (serotype 2 / strain s2) | no rank | viruses | no rank | viruses | 10959 |
| human rotavirus g4 strain st. thomas 3 | no rank | viruses | no rank | viruses | 10960 |
| rotavirus sp. | no rank | viruses | species | viruses | 10970 |
| rotavirus subgroup 2 | no rank | viruses | no rank | viruses | 10971 |
| wound tumor virus | species | viruses | species | viruses | 10987 |
| fijivirus | | | genus | viruses | 10988 |
| infectious bursal disease virus stc | no rank | viruses | no rank | viruses | 11001 |
| infectious pancreatic necrosis virus | species | viruses | species | viruses | 11002 |
| ustilago maydis virus p6 | no rank | viruses | species | viruses | 11010 |
| giardiavirus | | | genus | viruses | 11011 |
| eastern equine encephalitis virus | species | viruses | species | viruses | 11021 |
| eastern equine encephalitis virus (strain va33[ten broeck]) | no rank | viruses | no rank | viruses | 11022 |
| ross river virus (strain nb5092) | no rank | viruses | no rank | viruses | 11031 |
| ross river virus (strain t48) | no rank | viruses | no rank | viruses | 11032 |
| rubella virus | species | viruses | species | viruses | 11041 |
| rubella virus strain m33 | no rank | viruses | no rank | viruses | 11043 |
| flaviviridae | | | family | viruses | 11050 |
| dengue virus 1 jamaica/cv1636/1977 | no rank | viruses | no rank | viruses | 11058 |
| dengue virus 1 nauru/west pac/1974 | no rank | viruses | no rank | viruses | 11059 |
| dengue virus 2 tonga/ekb194/1974 | no rank | viruses | no rank | viruses | 11067 |
| dengue virus 2 thailand/puo-218/1980 | no rank | viruses | no rank | viruses | 11068 |
| japanese encephalitis virus strain jaoars982 | no rank | viruses | no rank | viruses | 11075 |
| japanese encephalitis virus strain nakayama | no rank | viruses | no rank | viruses | 11076 |
| kunjin virus | no rank | viruses | no rank | viruses | 11077 |
| tick-borne encephalitis virus | species | viruses | species | viruses | 11084 |
| langat virus | species | viruses | species | viruses | 11085 |
| yellow fever virus 17d | no rank | viruses | no rank | viruses | 11090 |
| classical swine fever virus - brescia | no rank | viruses | no rank | viruses | 11098 |
| bovine viral diarrhea virus 1 | species | viruses | species | viruses | 11099 |
| hepatitis c virus (isolate ec10) | no rank | viruses | no rank | viruses | 11106 |
| hepatitis c virus (isolate ec1) | no rank | viruses | no rank | viruses | 11107 |
| hepatitis c virus hc-j2 | no rank | viruses | no rank | viruses | 11111 |
| hepatitis c virus hc-j5 | no rank | viruses | no rank | viruses | 11112 |
| infectious bronchitis virus | no rank | viruses | no rank | viruses | 11120 |
| avian infectious bronchitis virus (strain 6/82) | no rank | viruses | no rank | viruses | 11121 |
| avian infectious bronchitis virus (strain d3896) | no rank | viruses | no rank | viruses | 11125 |
| avian infectious bronchitis virus (strain kb8523) | no rank | viruses | no rank | viruses | 11126 |
| bovine coronavirus strain quebec | no rank | viruses | no rank | viruses | 11133 |
| bovine coronavirus strain vaccine | no rank | viruses | no rank | viruses | 11134 |
| murine hepatitis virus strain jhm | no rank | viruses | no rank | viruses | 11144 |
| murine hepatitis virus strain s | no rank | viruses | no rank | viruses | 11145 |
| transmissible gastroenteritis virus | no rank | viruses | no rank | viruses | 11149 |
| porcine transmissible gastroenteritis coronavirus strain fs772/70 | no rank | viruses | no rank | viruses | 11150 |
| mumps virus strain edinburgh 6 | no rank | viruses | no rank | viruses | 11164 |
| mumps virus strain matsuyama | no rank | viruses | no rank | viruses | 11165 |
| mumps virus strain sbl-1 | no rank | viruses | no rank | viruses | 11173 |
| mumps virus strain takahashi | no rank | viruses | no rank | viruses | 11174 |
| newcastle disease virus strain queensland/66 | no rank | viruses | no rank | viruses | 11186 |
| newcastle disease virus strain her/33 | no rank | viruses | no rank | viruses | 11187 |
| sendai virus (strain fushimi) | no rank | viruses | no rank | viruses | 11195 |
| sendai virus (strain harris) | no rank | viruses | no rank | viruses | 11196 |
| simian virus 5 (strain w3) | no rank | viruses | no rank | viruses | 11208 |
| human parainfluenza virus 1 (c39) | no rank | viruses | no rank | viruses | 11210 |
| human parainfluenza 3 virus (strain nih 47885) | no rank | viruses | no rank | viruses | 11217 |
| human parainfluenza 3 virus (strain aus/124854/74) | no rank | viruses | no rank | viruses | 11218 |
| human parainfluenza 3 virus (strain wash/1511/73) | no rank | viruses | no rank | viruses | 11223 |
| canine distemper virus | species | viruses | species | viruses | 11232 |
| canine distemper virus strain onderstepoort | no rank | viruses | no rank | viruses | 11233 |
| rinderpest virus | species | viruses | species | viruses | 11241 |
| pneumovirus | | | genus | viruses | 11245 |
| bovine respiratory syncytial virus | species | viruses | species | viruses | 11246 |
| human respiratory syncytial virus (strain rsb5857) | no rank | viruses | no rank | viruses | 11254 |
| human respiratory syncytial virus (strain rsb6190) | no rank | viruses | no rank | viruses | 11255 |
| murine pneumonia virus | species | viruses | species | viruses | 11263 |
| turkey rhinotracheitis virus | no rank | viruses | no rank | viruses | 11264 |
| piry virus | species | viruses | species | viruses | 11274 |
| vesicular stomatitis virus | species | viruses | species | viruses | 11276 |
| vesicular stomatitis new jersey virus | species | viruses | species | viruses | 11280 |
| vesicular stomatitis virus (serotype new jersey / strain hazelhurst) | no rank | viruses | no rank | viruses | 11281 |
| viral hemorrhagic septicemia virus 07-71 | no rank | viruses | no rank | viruses | 11288 |
| viral hemorrhagic septicemia virus strain makah | no rank | viruses | no rank | viruses | 11289 |
| rabies virus pm | no rank | viruses | no rank | viruses | 11297 |
| rabies virus nishigahara rceh | no rank | viruses | no rank | viruses | 11298 |
| orthomyxoviridae | | | family | viruses | 11308 |
| unidentified influenza virus | species | viruses | species | viruses | 11309 |
| influenza a virus (a/chicken/japan/24(h7n7)) | no rank | viruses | no rank | viruses | 11340 |
| influenza a virus (strain a/duck/hokkaido/5/77) | no rank | viruses | no rank | viruses | 11357 |
| influenza a virus (strain a/equine/tokyo/71) | no rank | viruses | no rank | viruses | 11418 |
| influenza a virus (a/mallard/alberta/88/76(h3n8)) | no rank | viruses | no rank | viruses | 11430 |
| influenza a virus (strain a/shearwater/australia/75) | no rank | viruses | no rank | viruses | 11462 |
| influenza a virus (strain a/victoria/5/68) | no rank | viruses | no rank | viruses | 11482 |
| influenza a virus (strain a/swine/germany/2/81) | no rank | viruses | no rank | viruses | 11495 |
| influenza a virus (a/swine/hong kong/126/82(h3n2)) | | viruses | no rank | viruses | 11498 |