| dracunculus lutrae | 1 | species | invertebrates | helminths | 520087 |
| chicken astrovirus 2 | -3 | species | viruses | viruses | 544801 |
| chicken astrovirus 1 | -3 | no rank | viruses | viruses | 544802 |
| protostrongylus boughtoni | 7 | species | invertebrates | helminths | 544912 |
| protostrongylus pulmonalis | 2 | species | invertebrates | helminths | 544913 |
| protostrongylus rupicaprae | 1 | species | invertebrates | helminths | 544914 |
| entamoeba muris | 5 | species | invertebrates | protozoa | 545931 |
| propionibacterium acidifaciens | 1 | species | bacteria | bacteria | 556499 |
| morellia aenescens | -3 | species | invertebrates | fly | 559657 |
| morellia hortorum | -3 | species | invertebrates | fly | 559658 |
| morellia simplex | -3 | species | invertebrates | fly | 559659 |
| cryptosporidium fayeri | 2 | species | invertebrates | protozoa | 582425 |
| human cosavirus a | -3 | no rank | viruses | viruses | 586419 |
| corynebacterium pyruviciproducens | 1 | species | bacteria | bacteria | 598660 |
| neisseria shayeganii | 1 | species | bacteria | bacteria | 607712 |
| human klassevirus 1 | 1 | species | viruses | viruses | 655603 |
| hmo astrovirus a | -3 | species | viruses | viruses | 682382 |
| parafilaroides gymnurus | 4 | species | invertebrates | helminths | 690305 |
| sarcocystis hjorti | 2 | species | invertebrates | protozoa | 703404 |
| eimeria lamae | 1 | species | invertebrates | protozoa | 703585 |
| ophionyssus natricis | 6 | species | invertebrates | | 704026 |
| arcobacter trophiarum | 1 | species | bacteria | bacteria | 708186 |
| entamoeba bovis | 2 | species | invertebrates | protozoa | 715123 |
| cyclovirus ng12 | -3 | species | viruses | viruses | 742922 |
| human stool-associated circular virus ng13 | -3 | species | viruses | viruses | 743300 |
| eimeria macusaniensis | 6 | species | invertebrates | protozoa | 745318 |
| dinobdella ferox | 2 | species | invertebrates | | 755736 |
| heterodoxus spiniger | 3 | species | invertebrates | | 762516 |
| brachyspira rattus | -3 | species | bacteria | bacteria | 797076 |
| brachyspira muridarum | -3 | species | bacteria | bacteria | 797079 |
| brachyspira muris | -3 | species | bacteria | bacteria | 797080 |
| tetnovirus 1 | 1 | species | viruses | viruses | 870711 |
| mlv-related virus cfs | -3 | no rank | viruses | viruses | 878322 |
| necropsobacter rosorum | -3 | species | bacteria | bacteria | 908285 |
| escherichia coli p12b | 1 | no rank | bacteria | bacteria | 910348 |
| nematodirella cameli | 1 | species | invertebrates | helminths | 911091 |
| human polyomavirus 9 | 1 | species | viruses | viruses | 943908 |
| okadaella gastrococcus | 1 | species | bacteria | bacteria | 948105 |
| eimeria guevarai | 1 | species | | protozoa | |
| eimeria marsica | 1 | species | | protozoa | |
| eimeria moschati | -3 | species | | protozoa | |
| eimeria nazijrovi | -3 | species | | protozoa | |
| eimeria ovibovis | -3 | species | | protozoa | |
| trypanosoma diasi | -3 | species | | protozoa | |
| trypanosoma uniforme | 1 | species | | protozoa | |
| trichomitus fecalis | -3 | species | | protozoa | |
| tyzzeria alleni | -3 | species | | protozoa | |
| tyzzeria pellerdyi | -3 | species | | protozoa | |
| trichodectes climax | -3 | species | | | |
| trichodectes limbatus | -3 | species | | | |
| trichodectes sphaerocephalus | -3 | species | | | |
| chelopistes meleagridis | 2 | species | | | |
| capillaria intestinalis | -3 | species | | helminths | |
| cephenemyia auribarbis | 2 | species | | fly | 1888233 |
| bovicola painei | -3 | species | | | |
| capillaria annulosa | -3 | species | | helminths | |
| tetratrichomonas pavlovi | -3 | species | | protozoa | |
| skrjabinagylus petrowi | -3 | species | | helminths | |
| sarcocystis bigemina | -3 | species | | protozoa | |
| sarcocystis cervii | -3 | species | | protozoa | |
| skrjabinagia kolchida | 2 | species | | helminths | |
| skrjabinagylus | -3 | genus | | | |
| porocephalus subulifer | -3 | species | | | |
| pseudostertagia | 1 | genus | | | |
| placobdella rugosa | -3 | species | | | 1258696 |
| pentastoma najae | -3 | species | | | |
| trichodectes parumpilosus | -3 | species | | | |
| spiculocaulus leuckarti | -3 | species | | helminths | 1418103 |
| spirura rytipleurites rytiplanites | -3 | subspecies | | helminths | |
| simondsia | 3 | genus | | | |
| protospirura | 9 | genus | | | 1080593 |
| quilonia uganda | -3 | species | | helminths | |
| plasmodium fallax | 7 | species | | protozoa | |
| pneumonyssus caninum | 6 | species | | | |
| pharyngobolus africanus | -3 | species | | fly | |
| oncicola canis | 3 | species | | helminths | |
| microthoracius praelongiceps | -3 | species | | | |
| menopon phaestomum | -3 | species | | | |
| leucocytozoon sakharoffi | 2 | species | | protozoa | |
| macrocanthorhynchus catalinum | -3 | species | | helminths | |
| mammomonogamus mcgaughei | -3 | species | | helminths | |
| hoplopleura captiosa | 2 | species | | | |
| isospora burrowsi | 3 | species | | protozoa | |
| varestrongylus pneumonicus | 1 | species | | helminths | |
| trichuris sylvilagi | 1 | species | | helminths | |
| troglostrongylus subcrenatus | -3 | species | | helminths | |
| centrocestus kurkawai | -3 | species | | helminths | |
| cephenemyia apicata | 2 | species | | fly | |
| angiostrongylus michiganensis | 2 | species | | helminths | |
| tetrameres confusa | 1 | species | | helminths | |
| skrjabinagylus nasicola | -3 | species | | helminths | |
| spiculocaulus austriacus | -3 | species | | helminths | |
| spirura | 4 | genus | | | |
| sarcocystis bovifelis | -3 | species | | protozoa | 1749069 |
| protospirura muricola | 7 | species | | helminths | 1766045 |
| equinurbia sipunculiformis | -3 | species | | helminths | |
| eimeria riedmuelleri | -3 | species | | protozoa | |
| eimeria triffittae | -3 | species | | protozoa | |
| eimeria uniungulati | -3 | species | | protozoa | |
| eimeria neitzi | -3 | species | | protozoa | |