| algeria | | alphacoronavirus sp. | species | 4 | 0 |
| australia | | alphacoronavirus sp. | species | 5 | 0 |
| australia | | bat coronavirus m.aus/australia/cov088/2007 | species | 1 | 0 |
| australia | | bat coronavirus m.aus/australia/cov132/2007 | species | 1 | 0 |
| australia | | bat coronavirus m.aus/australia/cov180/1996 | species | 1 | 0 |
| australia | | bat coronavirus m.mac/australia/cov034/2008 | species | 1 | 0 |
| australia | | bat coronavirus m.sch/australia/cov146/2007 | species | 1 | 0 |
| australia | | bat coronavirus r.meg/australia/cov100/2007 | species | 1 | 0 |
| australia | | chalinolobus gouldii alphacoronavirus | species | 5 | 0 |
| australia | | chalinolobus morio alphacoronavirus | species | 2 | 0 |
| australia | | falsistrellus mackenziei alphacoronavirus | species | 1 | 0 |
| australia | | ozimops sp. alphacoronavirus | species | 1 | 0 |
| australia | | vespadelus baverstocki alphacoronavirus | species | 1 | 0 |
| australia | | vespadelus regulus alphacoronavirus | species | 5 | 0 |
| bangladesh | | coronavirus predict cov-35 | species | 7 | 0 |
| bangladesh | | wencheng sm shrew coronavirus | species | 8 | 0 |
| bolivia | | alphacoronavirus trinidad/1fy2ba/2007 | species | 6 | 0 |
| bolivia | | coronavirus predict cov-40 | species | 2 | 0 |
| brazil | | alphacoronavirus tadaridam4 | species | 1 | 0 |
| brazil | | alphacoronavirus trinidad/1fy2ba/2007 | species | 5 | 0 |
| brazil | | bat alphacoronavirus | species | 45 | 0 |
| brazil | | bat coronavirus art.lit/1816/bra/2010 | species | 1 | 0 |
| brazil | | bat coronavirus art.lit/2294/bra/2012 | species | 1 | 0 |
| brazil | | bat coronavirus car.per/1514/bra/2011 | species | 1 | 0 |
| brazil | | bat coronavirus car.per/1516/bra/2011 | species | 1 | 0 |
| brazil | | bat coronavirus car.per/1599/bra/2012 | species | 1 | 0 |
| brazil | | bat coronavirus glo.sor/100/bra/2014 | species | 1 | 0 |
| brazil | | bat coronavirus mol.ruf/63/bra/2014 | species | 1 | 0 |
| brazil | | bat coronavirus mol.ruf/92/bra/2013 | species | 1 | 0 |
| brazil | | bat coronavirus myo.nig/117/bra/2013 | species | 1 | 0 |
| brazil | | bat coronavirus myo.rip/259/bra/2013 | species | 1 | 0 |
| brazil | | bat coronavirus poa/2012/105 | species | 1 | 0 |
| brazil | | bat coronavirus poa/2012/127 | species | 1 | 0 |
| brazil | | bat coronavirus poa/2012/132 | species | 1 | 0 |
| brazil | | bat coronavirus poa/2012/143 | species | 1 | 0 |
| brazil | | bat coronavirus poa/2012/144 | species | 1 | 0 |
| brazil | | bat coronavirus poa/2012/44 | species | 1 | 0 |
| brazil | | bat coronavirus poa/2012/94 | species | 1 | 0 |
| brazil | | bat coronavirus poa/2012/96 | species | 1 | 0 |
| brazil | | bat coronavirus poa/2012/b01 | species | 1 | 0 |
| brazil | | bat coronavirus poa/2012/d09 | species | 1 | 0 |
| brazil | | bat coronavirus poa/2012/e05 | species | 1 | 0 |
| brazil | | bat coronavirus poa/2012/e07 | species | 1 | 0 |
| brazil | | bat coronavirus poa/2012/e11 | species | 1 | 0 |
| brazil | | bat coronavirus poa/2012/e9 | species | 1 | 0 |
| brazil | | bat coronavirus poa/2012/g01 | species | 1 | 0 |
| brazil | | bat coronavirus poa/2012/g03 | species | 1 | 0 |
| brazil | | bat coronavirus stu.lil/1573/bra/2012 | species | 1 | 0 |
| brazil | | bat coronavirus stu.lil/1613/bra/2012 | species | 1 | 0 |
| brazil | | bat coronavirus stu.lil/1617/bra/2012 | species | 1 | 0 |
| brazil | | bat coronavirus/2173/2014/cynomops planirostris/brazil | species | 1 | 0 |
| brazil | | bat coronavirus/2218/2014/cynomops planirostris/brazil | species | 1 | 0 |
| brazil | | bat coronavirus/4292/2013/desmodus rotundus/brazil | species | 1 | 0 |
| brazil | | bat coronavirus/4539/2013/cynomops planirostris/brazil | species | 2 | 0 |
| brazil | | bat coronavirus/4620/2014/glossophaga soricina/brazil | species | 1 | 0 |
| brazil | | bat coronavirus/4702/2013/cynomops abrasus/brazil | species | 1 | 0 |
| brazil | | bat coronavirus/4705/2013/cynomops abrasus/brazil | species | 2 | 0 |
| brazil | | bat coronavirus/5026/2013/cynomops abrasus/brazil | species | 1 | 0 |
| brazil | | coronavirus predict cov-12 | species | 4 | 0 |
| brazil | | coronavirus predict cov-13 | species | 4 | 0 |
| brazil | | coronavirus predict cov-14 | species | 1 | 0 |
| brazil | | coronavirus predict cov-15 | species | 5 | 0 |
| brazil | | coronavirus predict cov-18 | species | 2 | 0 |
| brazil | | coronavirus predict cov-4 | species | 3 | 0 |
| brazil | sao paulo | alphacoronavirus sp. | species | 2 | 0 |
| brazil | sao paulo | bat coronavirus m.rufus28/brazil/2010 | species | 1 | 0 |
| cambodia | | alphacoronavirus sp. | species | 20 | 0 |
| cambodia | | coronavirus predict cov-25 | species | 2 | 0 |
| cambodia | | coronavirus predict cov-35 | species | 7 | 0 |
| cameroon | | chaerephon bat coronavirus/kenya/ky22/2006 | species | 28 | 0 |
| cameroon | | coronavirus predict cov-33 | species | 1 | 0 |
| cameroon | | coronavirus predict cov-35 | species | 11 | 0 |
| china | | alphacoronavirus sp. | species | 23 | 0 |
| china | | anlong ms bat coronavirus | species | 2 | 0 |
| china | | bat alphacoronavirus | species | 32 | 0 |
| china | | bat coronavirus 1 | species | 123 | 0 |
| china | | bat coronavirus a977/a970 | species | 1 | 0 |
| china | | bat coronavirus anhui/911/2005 | species | 2 | 0 |
| china | | bat coronavirus hku6 | species | 62 | 0 |
| china | | bat coronavirus mr/shanxi2011 | species | 1 | 0 |
| china | | btmd-betacov/hub2013 | species | 1 | 0 |
| china | | btmf-alphacov/gd2012-a | species | 1 | 0 |
| china | | btmf-alphacov/gd2012-b | species | 1 | 0 |
| china | | btmf-alphacov/hen2013-a | species | 1 | 0 |
| china | | btmf-alphacov/hen2013-b | species | 1 | 0 |
| china | | btmf-alphacov/hub2013-a | species | 1 | 0 |
| china | | btrf-betacov/hen2013 | species | 1 | 0 |
| china | | btrf-betacov/hub2013 | species | 1 | 0 |
| china | | coronavirus btrs-alphacov/yn2018 | species | 1 | 0 |
| china | | coronavirus predict cov-37 | species | 13 | 0 |
| china | | coronavirus predict cov-38 | species | 1 | 0 |
| china | | coronavirus predict cov-39 | species | 2 | 0 |
| china | | coronavirus predict cov-48 | species | 2 | 0 |
| china | | coronavirus predict cov-59 | species | 6 | 0 |
| china | | coronavirus predict cov-60 | species | 2 | 0 |
| china | | coronavirus predict cov-61 | species | 4 | 0 |
| china | | hipposideros bat alphacoronavirus strain mj_55c | species | 1 | 0 |
| china | | hipposideros bat alphacoronavirus strain mj_67c | species | 1 | 0 |
| china | | lushi ml bat coronavirus | species | 6 | 0 |
| china | | myotis alphacoronavirus | species | 9 | 0 |
| china | | myotis bat alphacoronavirus strain mj_26c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain mj_27c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain mj_2c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain mj_51c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain ynxy_10c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain ynxy_11c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain ynxy_12c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain ynxy_13c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain ynxy_15c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain ynxy_16c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain ynxy_17c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain ynxy_18c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain ynxy_19c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain ynxy_20c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain ynxy_21c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain ynxy_31c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain ynxy_33c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain ynxy_34c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain ynxy_39c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain ynxy_3c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain ynxy_41c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain ynxy_42c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain ynxy_44c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain ynxy_45c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain ynxy_46c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain ynxy_47c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain ynxy_48c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain ynxy_50c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain ynxy_54c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain ynxy_5c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain ynxy_7c | species | 1 | 0 |
| china | | myotis bat alphacoronavirus strain ynxy_8c | species | 1 | 0 |
| china | | neixiang md bat coronavirus | species | 1 | 0 |
| china | | pipistrellus bat alphacoronavirus | species | 3 | 0 |
| china | | rhinolophus bat alphacoronavirus strain mj_69c | species | 1 | 0 |
| china | | rousettus bat alphacoronavirus strain ml_32i | species | 1 | 0 |
| china | | tylonycteris bat alphacoronavirus | species | 1 | 0 |
| china | | wencheng sm shrew coronavirus | species | 26 | 0 |
| china | guangdong | alphacoronavirus sp. | species | 1 | 0 |
| china | guangxi | alphacoronavirus sp. | species | 1 | 0 |
| china | guizhou | alphacoronavirus sp. | species | 1 | 0 |
| china | henan | bat alphacoronavirus | species | 10 | 0 |
| china | jiangxi | alphacoronavirus sp. | species | 2 | 0 |
| democratic republic of the congo | | chaerephon bat coronavirus/kenya/ky22/2006 | species | 10 | 0 |
| democratic republic of the congo | | coronavirus predict cov-35 | species | 1 | 0 |
| ethiopia | | chaerephon bat coronavirus/kenya/ky22/2006 | species | 19 | 0 |
| ethiopia | | chaerephon bat coronavirus/kenya/ky41/2006 | species | 4 | 0 |
| finland | uusimaa region | bat alphacoronavirus | species | 9 | 0 |
| france | | alphacoronavirus sp. | species | 28 | 0 |
| france | | bat alphacoronavirus | species | 28 | 0 |
| france | alsace region | alphacoronavirus sp. | species | 27 | 0 |
| france | centre region | alphacoronavirus pip1_cr_fr_2014 | species | 1164 | 0 |
| france | centre region | alphacoronavirus pip2_cr_fr_2014 | species | 1 | 0 |
| france | centre region | alphacoronavirus pip3_m_fr_2014 | species | 249 | 0 |
| france | haute-normandie region | alphacoronavirus sp. | species | 2 | 0 |
| ghana | | chaerephon bat coronavirus/kenya/ky22/2006 | species | 3 | 0 |
| guinea | | chaerephon bat coronavirus/kenya/ky22/2006 | species | 12 | 0 |
| italy | | alphacoronavirus myotis/13rs384_31/italy/2012 | species | 1 | 0 |
| italy | | alphacoronavirus pipistrellus kuhlii/italy/206645-41/2010 | species | 1 | 0 |
| italy | | alphacoronavirus pipistrellus kuhlii/italy/206679-3/2010 | species | 1 | 0 |
| italy | | alphacoronavirus sp. | species | 1 | 0 |
| ivory coast | | chaerephon bat coronavirus/kenya/ky22/2006 | species | 2 | 0 |
| japan | | bat coronavirus m.ful/japan/01/2009 | species | 1 | 0 |
| japan | | bat coronavirus m.ful/japan/01/2010 | species | 1 | 0 |
| japan | | bat coronavirus m.ful/japan/02/2009 | species | 1 | 0 |
| japan | | bat coronavirus m.ful/japan/02/2010 | species | 1 | 0 |
| japan | | bat coronavirus m.ful/japan/03/2010 | species | 1 | 0 |
| japan | fukui prefecture | bat alphacoronavirus | species | 18 | 0 |
| japan | nara prefecture | bat alphacoronavirus | species | 3 | 0 |
| japan | wakayama prefecture | bat alphacoronavirus | species | 10 | 0 |
| jordan | | bat coronavirus 1 | species | 1 | 0 |
| kazakhstan | south kazakhstan region | bat alphacoronavirus | species | 12 | 0 |
| kenya | | cardioderma bat coronavirus/kenya/ky43/2006 | species | 1 | 0 |
| kenya | | chaerephon bat coronavirus/kenya/ky22/2006 | species | 5 | 0 |
| kenya | | chaerephon bat coronavirus/kenya/ky41/2006 | species | 2 | 0 |
| kenya | | miniopterus bat coronavirus/kenya/ky27/2006 | species | 2 | 0 |
| kenya | | miniopterus bat coronavirus/kenya/ky33/2006 | species | 2 | 0 |
| laos | | bat alphacoronavirus | species | 2 | 0 |
| laos | | bat coronavirus 1 | species | 2 | 0 |
| laos | | bat coronavirus hipposideros/ratcha-67/tha/2007 | species | 2 | 0 |
| laos | | coronavirus predict cov-53 | species | 5 | 0 |
| malaysia | | bat alphacoronavirus | species | 6 | 0 |
| malaysia | | coronavirus predict cov-36 | species | 1 | 0 |
| malaysia | | coronavirus predict cov-52 | species | 4 | 0 |
| mexico | campeche | coronavirus mex_cov-1 | species | 3 | 0 |
| mexico | campeche | coronavirus mex_cov-2 | species | 2 | 0 |
| mexico | campeche | coronavirus mex_cov-4 | species | 1 | 0 |
| mexico | campeche | coronavirus mex_cov-5b | species | 6 | 0 |
| mexico | chiapas | coronavirus mex_cov-1 | species | 2 | 0 |
| mexico | chiapas | coronavirus mex_cov-3 | species | 1 | 0 |
| mexico | chiapas | coronavirus mex_cov-5a | species | 1 | 0 |
| mexico | chiapas | coronavirus mex_cov-6 | species | 1 | 0 |
| mexico | federal district | coronavirus mex_cov-7 | species | 3 | 0 |
| mexico | federal district | coronavirus mex_cov-8 | species | 3 | 0 |
| mexico | mexico | coronavirus mex_cov-7 | species | 3 | 0 |
| mexico | mexico | coronavirus mex_cov-8 | species | 3 | 0 |
| morocco | | alphacoronavirus sp. | species | 1 | 0 |
| nepal | | coronavirus predict cov-45 | species | 1 | 0 |
| netherlands | | ferret coronavirus 4e98 | species | 1 | 0 |
| netherlands | | ferret coronavirus 511c | species | 1 | 0 |
| new zealand | | mystacina coronavirus new zealand/2013 | species | 5 | 0 |
| peru | | bat alphacoronavirus | species | 1 | 0 |
| peru | | bat coronavirus trinidad/1fy2ba/2007 | species | 1 | 0 |
| philippines | calabarzon region | bat coronavirus 2231/philippines/2010 | species | 1 | 0 |
| poland | | alphacoronavirus tt-2016a | species | 1 | 0 |
| republic of the congo | | chaerephon bat coronavirus/kenya/ky22/2006 | species | 6 | 0 |
| republic of the congo | | coronavirus predict cov-21 | species | 2 | 0 |
| republic of the congo | | coronavirus predict cov-28 | species | 1 | 0 |
| republic of the congo | | coronavirus predict cov-29 | species | 4 | 0 |
| republic of the congo | | coronavirus predict cov-54 | species | 1 | 0 |
| republic of the congo | | coronavirus predict cov-58 | species | 1 | 0 |
| republic of the congo | | kenya bat coronavirus btky33/2006 | species | 1 | 0 |
| republic of the congo | | kenya bat coronavirus/ky33/2006 | species | 3 | 0 |
| rwanda | | chaerephon bat coronavirus/kenya/ky22/2006 | species | 6 | 0 |
| rwanda | | coronavirus predict cov-42 | species | 1 | 0 |
| rwanda | | kenya bat coronavirus btky33/2006 | species | 1 | 0 |
| saudi arabia | | alphacoronavirus sp. | species | 1 | 0 |
| saudi arabia | | bat coronavirus pikuh/cii_ksa_001/riyadh/saudi arabia/2013 | species | 1 | 0 |
| saudi arabia | | bat coronavirus rhhar/cii_ksa_002/bisha/saudi arabia/2013 | species | 1 | 0 |
| saudi arabia | | bat coronavirus rhhar/cii_ksa_003/bisha/saudi arabia/2013 | species | 1 | 0 |
| south africa | | alphacoronavirus btcov/grnc1/neo_cap/rsa/2012 | species | 1 | 0 |
| south africa | | alphacoronavirus btcov/grnc2/neo_cap/rsa/2012 | species | 1 | 0 |
| south africa | | alphacoronavirus btcov/grnc3/neo_cap/rsa/2012 | species | 1 | 0 |
| south africa | | alphacoronavirus btcov/grnc4/neo_cap/rsa/2012 | species | 1 | 0 |
| south africa | | alphacoronavirus btcov/grnc5/neo_cap/rsa/2012 | species | 1 | 0 |
| south africa | | alphacoronavirus btcov/grnc6/neo_cap/rsa/2012 | species | 1 | 0 |
| south africa | | alphacoronavirus btcov/grnc7/neo_cap/rsa/2012 | species | 1 | 0 |
| south africa | | alphacoronavirus btcov/grnc8/neo_cap/rsa/2012 | species | 1 | 0 |
| south africa | | alphacoronavirus btcov/mstm2/min_nat/rsa/2010 | species | 2 | 0 |
| south africa | | alphacoronavirus btcov/mstm6/min_nat/rsa/2010 | species | 1 | 0 |
| south africa | | alphacoronavirus btcov/ncl_mco1/mop_con/rsa/2012 | species | 1 | 0 |
| south africa | | alphacoronavirus btcov/vh_nc2/neo_cap/rsa/2012 | species | 1 | 0 |
| south africa | | alphacoronavirus sp. | species | 48 | 0 |
| south africa | eastern cape province | bat alphacoronavirus | species | 8 | 0 |
| south africa | kwazulu-natal province | bat alphacoronavirus | species | 35 | 0 |
| south africa | northern cape province | bat alphacoronavirus | species | 1 | 0 |
| south africa | the western cape province | bat alphacoronavirus | species | 34 | 0 |
| south korea | | alphacoronavirus sp. | species | 4 | 0 |
| spain | | alphacoronavirus h.sav/l/spain/2007 | species | 1 | 0 |
| spain | | alphacoronavirus m.bly/b/spain/2004 | species | 1 | 0 |
| spain | | alphacoronavirus m.dau/h/spain/2007 | species | 1 | 0 |
| spain | | alphacoronavirus m.myo/i/spain/2007 | species | 1 | 0 |
| spain | | alphacoronavirus m.sch/a/spain/2004 | species | 1 | 0 |
| spain | | alphacoronavirus n.las/c/spain/2007 | species | 1 | 0 |
| spain | | alphacoronavirus n.las/d/spain/2007 | species | 1 | 0 |
| spain | | alphacoronavirus n.las/e/spain/2007 | species | 1 | 0 |
| spain | | alphacoronavirus n.las/f/spain/2007 | species | 1 | 0 |
| spain | | alphacoronavirus n.las/g/spain/2007 | species | 1 | 0 |
| spain | | alphacoronavirus p.kuh/iprima/spain/2007 | species | 1 | 0 |
| spain | | alphacoronavirus p.sp/k/spain/2007 | species | 1 | 0 |
| spain | | alphacoronavirus sp. | species | 25 | 0 |
| sri lanka | | bat alphacoronavirus | species | 5 | 0 |
| sweden | | bat alphacoronavirus | species | 1 | 0 |
| switzerland | | bat alphacoronavirus | species | 2 | 0 |
| tanzania | | alphacoronavirus sp. | species | 30 | 0 |
| tanzania | | chaerephon bat coronavirus/kenya/ky22/2006 | species | 180 | 0 |
| tanzania | | chaerephon bat coronavirus/kenya/ky41/2006 | species | 2 | 0 |
| tanzania | | coronavirus predict cov-21 | species | 24 | 0 |
| tanzania | | coronavirus predict cov-63 | species | 18 | 0 |
| thailand | | bat coronavirus 1 | species | 57 | 0 |
| thailand | | bat coronavirus hipposideros/ratcha-67/tha/2007 | species | 1 | 0 |
| thailand | | coronavirus predict cov-27 | species | 8 | 0 |
| thailand | | coronavirus predict cov-47 | species | 18 | 0 |
| tunisia | | alphacoronavirus sp. | species | 3 | 0 |
| uganda | | coronavirus predict cov-65 | species | 2 | 0 |
| uganda | | coronavirus predict cov-70 | species | 1 | 0 |
| uganda | | kenya bat coronavirus btky33/2006 | species | 1 | 0 |
| united kingdom | | alphacoronavirus tt-2016a | species | 4 | 0 |
| united states | | bat alphacoronavirus | species | 4 | 0 |
| united states | | bat alphacoronavirus/uf-fwc/2016/3 | species | 1 | 0 |
| united states | | ferret enteric coronavirus msu1 | species | 3 | 0 |
| united states | | rocky mountain bat coronavirus 11 | species | 1 | 0 |
| united states | | rocky mountain bat coronavirus 15/2006/ml | species | 2 | 0 |
| united states | | rocky mountain bat coronavirus 27 | species | 1 | 0 |
| united states | | rocky mountain bat coronavirus 3 | species | 1 | 0 |
| united states | | rocky mountain bat coronavirus 48 | species | 1 | 0 |
| united states | | rocky mountain bat coronavirus 6 | species | 1 | 0 |
| united states | | rocky mountain bat coronavirus 61/2007/ef | species | 2 | 0 |
| united states | | rocky mountain bat coronavirus 65 | species | 1 | 0 |
| united states | colorado | rm-bat-cov 429/2007/mv | species | 1 | 0 |
| united states | colorado | rm-bat-cov 453/2007/ef | species | 1 | 0 |
| vietnam | | alphacoronavirus sp. | species | 34 | 0 |
| vietnam | | coronavirus predict cov-35 | species | 60 | 0 |
| vietnam | | coronavirus predict cov-47 | species | 6 | 0 |
| zimbabwe | | bat alphacoronavirus | species | 512 | 0 |