| argentina | | vagococcus salmoninarum | species | 2 | 0 |
| austria | | vagococcus fluvialis | species | 2 | 0 |
| austria | | vagococcus salmoninarum | species | 1 | 0 |
| brazil | | vagococcus fluvialis | species | 10 | 0 |
| brazil | | vagococcus lutrae | species | 1 | 0 |
| brazil | sao paulo | vagococcus fluvialis | species | 131 | 0 |
| chile | | vagococcus sp. ls4b | species | 1 | 0 |
| china | | uncultured vagococcus sp. | species | 3 | 0 |
| china | | vagococcus carniphilus | species | 1 | 0 |
| china | | vagococcus fluvialis | species | 4 | 0 |
| china | | vagococcus sp. | species | 1 | 0 |
| china | | vagococcus sp. cl-4 | species | 1 | 0 |
| china | | vagococcus sp. enrichment culture | species | 1 | 0 |
| china | | vagococcus sp. wf-1 | species | 1 | 0 |
| china | | vagococcus sp. wf-2 | species | 1 | 0 |
| china | guangdong | vagococcus fluvialis | species | 45 | 0 |
| china | guangxi | uncultured vagococcus sp. | species | 1 | 0 |
| china | heilongjiang | vagococcus lutrae | species | 8 | 0 |
| china | hubei | vagococcus sp. hs-v5 | species | 1 | 0 |
| china | jiangsu | vagococcus sp. p1-8 | species | 1 | 0 |
| china | qinghai | vagococcus fluvialis | species | 1 | 0 |
| china | qinghai | vagococcus lutrae | species | 1 | 0 |
| china | qinghai | vagococcus sp. cf-49 | species | 6 | 0 |
| china | qinghai | vagococcus sp. mn-17 | species | 27 | 0 |
| china | shaanxi | vagococcus sp. a08 | species | 1 | 0 |
| china | shaanxi | vagococcus sp. a12 | species | 1 | 0 |
| china | shaanxi | vagococcus sp. a25 | species | 1 | 0 |
| china | shaanxi | vagococcus sp. a29 | species | 1 | 0 |
| china | shaanxi | vagococcus sp. a37 | species | 1 | 0 |
| china | shaanxi | vagococcus sp. a41 | species | 1 | 0 |
| china | shaanxi | vagococcus sp. a47 | species | 1 | 0 |
| china | shaanxi | vagococcus sp. a59 | species | 1 | 0 |
| china | shaanxi | vagococcus sp. a68 | species | 1 | 0 |
| china | shaanxi | vagococcus sp. a69 | species | 1 | 0 |
| china | tibet | vagococcus sp. mn-17 | species | 49 | 0 |
| china | yunnan | uncultured vagococcus sp. | species | 1 | 0 |
| czech republic | | vagococcus entomophilus | species | 13 | 0 |
| czech republic | prague city | vagococcus entomophilus | species | 21 | 0 |
| egypt | | vagococcus fluvialis | species | 1 | 0 |
| egypt | | vagococcus salmoninarum | species | 1 | 0 |
| germany | | uncultured vagococcus sp. | species | 9 | 0 |
| germany | | vagococcus sp. | species | 1 | 0 |
| hungary | veszprem county | vagococcus fluvialis | species | 1 | 0 |
| india | | vagococcus carniphilus | species | 4 | 0 |
| india | | vagococcus fluvialis | species | 10 | 0 |
| india | | vagococcus lutrae | species | 5 | 0 |
| india | gujarat | vagococcus carniphilus | species | 0 | 1 |
| india | gujarat | vagococcus fluvialis | species | 2 | 1 |
| india | manipur | vagococcus sp. sd3s2l1 | species | 1 | 0 |
| iran | alborz province | uncultured vagococcus sp. | species | 4 | 0 |
| italy | | vagococcus entomophilus | species | 3 | 0 |
| italy | | vagococcus fluvialis | species | 1 | 0 |
| japan | | vagococcus fluvialis | species | 4 | 0 |
| japan | kanagawa prefecture | vagococcus sp. aer no. 101 | species | 1 | 0 |
| japan | kanagawa prefecture | vagococcus sp. aer no. 106 | species | 1 | 0 |
| kenya | | vagococcus sp. bac17 | species | 1 | 0 |
| kuwait | | uncultured vagococcus sp. | species | 1 | 0 |
| lithuania | | vagococcus fluvialis | species | 1 | 0 |
| mali | | vagococcus teuberi | species | 8 | 0 |
| mexico | sinaloa | vagococcus sp. | species | 2 | 0 |
| netherlands | utrecht province | vagococcus fluvialis | species | 42 | 0 |
| nigeria | | uncultured vagococcus sp. | species | 43 | 0 |
| nigeria | | vagococcus carniphilus | species | 2 | 0 |
| nigeria | | vagococcus fluvialis | species | 5 | 0 |
| norway | oslo county | vagococcus fluvialis | species | 34 | 0 |
| romania | | uncultured vagococcus sp. | species | 1 | 0 |
| russia | kemerovo oblast | vagococcus fluvialis | species | 1 | 0 |
| south africa | | uncultured vagococcus sp. | species | 6 | 0 |
| south africa | | vagococcus fluvialis | species | 1 | 0 |
| south africa | | vagococcus sp. kab_15 | species | 1 | 0 |
| south korea | | vagococcus sp. c25 | species | 13 | 0 |
| south korea | | vagococcus sp. d7t301 | species | 10 | 0 |
| south korea | | vagococcus sp. pr22212 | species | 1 | 0 |
| tanzania | tanga region | vagococcus sp. | species | 2 | 0 |
| thailand | | vagococcus fluvialis | species | 1 | 0 |
| tunisia | | vagococcus sp. 220 | species | 1 | 0 |
| tunisia | | vagococcus sp. 221 | species | 1 | 0 |
| turkey | | vagococcus salmoninarum | species | 5 | 0 |
| turkey | kayseri province | vagococcus salmoninarum | species | 64 | 0 |
| united arab emirates | | vagococcus carniphilus | species | 1 | 0 |
| united arab emirates | | vagococcus lutrae | species | 1 | 0 |
| united kingdom | | vagococcus fessus | species | 9 | 0 |
| united kingdom | england | vagococcus fluvialis | species | 1 | 0 |
| united states | | uncultured vagococcus sp. | species | 10 | 0 |
| united states | | vagococcus carniphilus | species | 6 | 0 |
| united states | | vagococcus salmoninarum | species | 3 | 0 |
| united states | | vagococcus sp. | species | 2 | 0 |
| united states | california | vagococcus lutrae | species | 1 | 0 |
| united states | illinois | vagococcus elongatus | species | 56 | 0 |
| united states | iowa | vagococcus | genus | 0 | 1 |
| united states | massachusetts | vagococcus fluvialis | species | 131 | 0 |
| united states | montana | vagococcus fluvialis | species | 55 | 0 |
| united states | oregon | vagococcus | genus | 0 | 1 |
| united states | oregon | vagococcus carniphilus | species | 38 | 1 |
| united states | oregon | vagococcus fluvialis | species | 0 | 1 |
| united states | oregon | vagococcus salmoninarum | species | 46 | 0 |
| united states | south carolina | vagococcus fluvialis | species | 100 | 0 |
| venezuela | | vagococcus lutrae | species | 2 | 0 |