| algeria | | bacillus amyloliquefaciens | species | 9 | 0 |
| algeria | ouargla province | bacillus amyloliquefaciens | species | 36 | 0 |
| argentina | | bacillus amyloliquefaciens | species | 11 | 0 |
| australia | | bacillus amyloliquefaciens | species | 1 | 0 |
| australia | queensland | bacillus amyloliquefaciens | species | 34 | 0 |
| austria | | bacillus amyloliquefaciens | species | 1 | 0 |
| bangladesh | | bacillus amyloliquefaciens | species | 84 | 0 |
| belgium | | bacillus amyloliquefaciens | species | 2 | 0 |
| benin | | bacillus amyloliquefaciens | species | 31 | 0 |
| brazil | | bacillus amyloliquefaciens | species | 111 | 0 |
| brazil | | bacillus velezensis fzb42 | no rank | 1 | 0 |
| brazil | amazonas | bacillus amyloliquefaciens | species | 3 | 0 |
| brazil | bahia | bacillus amyloliquefaciens | species | 17 | 0 |
| brazil | federal district | bacillus amyloliquefaciens | species | 243 | 0 |
| brazil | goias | bacillus amyloliquefaciens | species | 82 | 0 |
| brazil | mato grosso | bacillus amyloliquefaciens | species | 56 | 0 |
| brazil | rio grande do sul | bacillus amyloliquefaciens | species | 1 | 0 |
| cambodia | siem reap province | bacillus amyloliquefaciens | species | 2 | 0 |
| cameroon | | bacillus amyloliquefaciens | species | 7 | 0 |
| canada | | bacillus amyloliquefaciens | species | 7 | 0 |
| chile | | bacillus amyloliquefaciens | species | 13 | 0 |
| china | | bacillus amyloliquefaciens | species | 1112 | 0 |
| china | | bacillus amyloliquefaciens ebl11 | no rank | 2 | 0 |
| china | | bacillus amyloliquefaciens hb-26 | no rank | 80 | 0 |
| china | | bacillus velezensis fzb42 | no rank | 1 | 0 |
| china | anhui | bacillus amyloliquefaciens | species | 2 | 0 |
| china | chongqing | bacillus amyloliquefaciens | species | 3 | 0 |
| china | fujian | bacillus amyloliquefaciens | species | 3 | 0 |
| china | gansu | bacillus amyloliquefaciens | species | 4 | 0 |
| china | guangdong | bacillus amyloliquefaciens | species | 55 | 0 |
| china | guangdong | bacillus amyloliquefaciens dc-12 | no rank | 83 | 0 |
| china | guangxi | bacillus amyloliquefaciens | species | 7 | 0 |
| china | guizhou | bacillus amyloliquefaciens | species | 7 | 0 |
| china | hainan | bacillus amyloliquefaciens | species | 3 | 0 |
| china | hebei | bacillus amyloliquefaciens | species | 16 | 0 |
| china | heilongjiang | bacillus amyloliquefaciens | species | 191 | 0 |
| china | henan | bacillus amyloliquefaciens | species | 27 | 0 |
| china | hubei | bacillus amyloliquefaciens | species | 114 | 0 |
| china | hunan | bacillus amyloliquefaciens | species | 1 | 0 |
| china | inner mongolia | bacillus amyloliquefaciens | species | 31 | 0 |
| china | jiangsu | bacillus amyloliquefaciens | species | 28 | 0 |
| china | jiangsu | bacillus amyloliquefaciens lx-11 | no rank | 80 | 0 |
| china | jiangxi | bacillus amyloliquefaciens | species | 99 | 0 |
| china | liaoning | bacillus amyloliquefaciens | species | 31 | 0 |
| china | ningxia | bacillus amyloliquefaciens | species | 1 | 0 |
| china | qinghai | bacillus amyloliquefaciens | species | 11 | 1 |
| china | shandong | bacillus amyloliquefaciens | species | 84 | 0 |
| china | shanghai shi | bacillus amyloliquefaciens | species | 3 | 0 |
| china | shanxi | bacillus amyloliquefaciens | species | 2 | 0 |
| china | sichuan | bacillus amyloliquefaciens | species | 18 | 0 |
| china | tianjin shi | bacillus amyloliquefaciens | species | 91 | 0 |
| china | tibet | bacillus amyloliquefaciens | species | 9 | 0 |
| china | xinjiang | bacillus amyloliquefaciens | species | 7 | 0 |
| china | yunnan | bacillus amyloliquefaciens | species | 15 | 0 |
| china | zhejiang | bacillus amyloliquefaciens | species | 177 | 1 |
| colombia | | bacillus amyloliquefaciens | species | 44 | 0 |
| colombia | boyaca department | bacillus amyloliquefaciens | species | 174 | 0 |
| cuba | | bacillus amyloliquefaciens | species | 4 | 0 |
| democratic republic of the congo | province orientale | bacillus amyloliquefaciens | species | 258 | 0 |
| dominican republic | | bacillus amyloliquefaciens | species | 2 | 0 |
| egypt | | bacillus amyloliquefaciens | species | 61 | 0 |
| egypt | asyut governorate | bacillus amyloliquefaciens | species | 0 | 1 |
| egypt | cairo governorate | bacillus amyloliquefaciens | species | 3 | 0 |
| egypt | gharbia governorate | bacillus amyloliquefaciens | species | 1 | 0 |
| egypt | giza governorate | bacillus amyloliquefaciens | species | 1 | 0 |
| egypt | minya governorate | bacillus amyloliquefaciens | species | 1 | 1 |
| egypt | north sinai governorate | bacillus amyloliquefaciens | species | 1 | 0 |
| egypt | qalyubia governorate | bacillus amyloliquefaciens | species | 1 | 0 |
| egypt | red sea governorate | bacillus amyloliquefaciens | species | 1 | 0 |
| ethiopia | | bacillus amyloliquefaciens | species | 4 | 0 |
| france | midi-pyrenees region | bacillus amyloliquefaciens | species | 2 | 0 |
| germany | | bacillus amyloliquefaciens | species | 14 | 0 |
| germany | | bacillus velezensis fzb42 | no rank | 3 | 0 |
| germany | berlin | bacillus velezensis fzb42 | no rank | 2 | 0 |
| germany | brandenburg | bacillus amyloliquefaciens | species | 2 | 0 |
| germany | thuringen | bacillus amyloliquefaciens | species | 1 | 0 |
| ghana | | bacillus amyloliquefaciens | species | 4 | 0 |
| ghana | ashanti region | bacillus amyloliquefaciens | species | 3 | 0 |
| ghana | northern region | bacillus amyloliquefaciens | species | 0 | 1 |
| greece | | bacillus amyloliquefaciens | species | 1 | 0 |
| greece | attica region | bacillus amyloliquefaciens | species | 2 | 0 |
| hungary | | bacillus amyloliquefaciens | species | 6 | 0 |
| iceland | | bacillus amyloliquefaciens | species | 1 | 0 |
| india | | bacillus amyloliquefaciens | species | 1539 | 0 |
| india | andaman and nicobar islands | bacillus amyloliquefaciens | species | 10 | 1 |
| india | andhra pradesh | bacillus amyloliquefaciens | species | 62 | 0 |
| india | assam | bacillus amyloliquefaciens | species | 8 | 0 |
| india | gujarat | bacillus amyloliquefaciens | species | 9 | 1 |
| india | gujarat | bacillus amyloliquefaciens egd-aq14 | no rank | 120 | 0 |
| india | himachal pradesh | bacillus amyloliquefaciens | species | 6 | 0 |
| india | jammu and kashmir | bacillus amyloliquefaciens | species | 3 | 0 |
| india | jharkhand | bacillus amyloliquefaciens | species | 1 | 0 |
| india | karnataka | bacillus amyloliquefaciens | species | 199 | 0 |
| india | kerala | bacillus amyloliquefaciens | species | 18 | 0 |
| india | madhya pradesh | bacillus amyloliquefaciens | species | 1 | 0 |
| india | maharashtra | bacillus amyloliquefaciens | species | 33 | 0 |
| india | manipur | bacillus amyloliquefaciens | species | 2 | 0 |
| india | nagaland | bacillus amyloliquefaciens | species | 5 | 0 |
| india | odisha | bacillus amyloliquefaciens | species | 8 | 0 |
| india | tamil nadu | bacillus amyloliquefaciens | species | 129 | 0 |
| india | uttar pradesh | bacillus amyloliquefaciens | species | 5 | 0 |
| india | west bengal | bacillus amyloliquefaciens | species | 61 | 0 |
| indonesia | | bacillus amyloliquefaciens | species | 15 | 0 |
| indonesia | west papua province | bacillus amyloliquefaciens | species | 6 | 0 |
| iran | | bacillus amyloliquefaciens | species | 27 | 0 |
| iran | gilan province | bacillus amyloliquefaciens | species | 1 | 0 |
| iran | isfahan province | bacillus amyloliquefaciens | species | 4 | 0 |
| iran | mazandaran province | bacillus amyloliquefaciens | species | 2 | 0 |
| iran | tehran province | bacillus amyloliquefaciens | species | 1 | 0 |
| iraq | | bacillus amyloliquefaciens | species | 1 | 0 |
| iraq | basra governorate | bacillus amyloliquefaciens | species | 1 | 0 |
| ireland | | bacillus amyloliquefaciens | species | 5 | 0 |
| israel | | bacillus amyloliquefaciens | species | 9 | 0 |
| israel | southern district | bacillus amyloliquefaciens | species | 10 | 0 |
| italy | | bacillus amyloliquefaciens | species | 61 | 0 |
| italy | basilicata region | bacillus amyloliquefaciens | species | 1 | 0 |
| italy | sardinia autonomous region | bacillus amyloliquefaciens | species | 1 | 0 |
| japan | | bacillus amyloliquefaciens | species | 39 | 0 |
| japan | fukushima prefecture | bacillus amyloliquefaciens | species | 26 | 0 |
| japan | hokkaido prefecture | bacillus amyloliquefaciens | species | 1 | 0 |
| japan | ibaraki prefecture | bacillus amyloliquefaciens | species | 2 | 0 |
| japan | mie prefecture | bacillus amyloliquefaciens | species | 2 | 0 |
| japan | nagasaki prefecture | bacillus amyloliquefaciens | species | 3 | 0 |
| japan | nara prefecture | bacillus amyloliquefaciens | species | 3 | 0 |
| japan | yamanashi prefecture | bacillus amyloliquefaciens | species | 3 | 0 |
| jordan | | bacillus amyloliquefaciens | species | 2 | 0 |
| kazakhstan | | bacillus amyloliquefaciens | species | 2 | 0 |
| kenya | | bacillus amyloliquefaciens | species | 2 | 0 |
| malaysia | | bacillus amyloliquefaciens | species | 14 | 0 |
| malaysia | johor | bacillus amyloliquefaciens | species | 2 | 0 |
| malaysia | kedah | bacillus amyloliquefaciens | species | 9 | 0 |
| malaysia | kelantan | bacillus amyloliquefaciens | species | 2 | 0 |
| malaysia | negeri sembilan | bacillus amyloliquefaciens | species | 2 | 0 |
| malaysia | pahang | bacillus amyloliquefaciens | species | 3 | 0 |
| malaysia | perak | bacillus amyloliquefaciens | species | 92 | 0 |
| malaysia | perlis | bacillus amyloliquefaciens | species | 2 | 0 |
| malaysia | sabah | bacillus amyloliquefaciens | species | 1 | 0 |
| malaysia | sarawak | bacillus amyloliquefaciens | species | 1 | 0 |
| malaysia | terengganu | bacillus amyloliquefaciens | species | 3 | 0 |
| mexico | | bacillus amyloliquefaciens | species | 53 | 0 |
| mexico | chihuahua | bacillus amyloliquefaciens | species | 1 | 0 |
| mexico | jalisco | bacillus amyloliquefaciens | species | 5 | 0 |
| mexico | michoacan ocampo | bacillus amyloliquefaciens | species | 2 | 0 |
| mexico | nayarit | bacillus amyloliquefaciens | species | 3 | 0 |
| mexico | veracruz-llave | bacillus amyloliquefaciens | species | 82 | 0 |
| mongolia | ulaanbaatar province | bacillus amyloliquefaciens | species | 1 | 0 |
| morocco | | bacillus amyloliquefaciens | species | 22 | 0 |
| morocco | tadla-azilal | bacillus amyloliquefaciens | species | 2 | 0 |
| netherlands | | bacillus amyloliquefaciens | species | 122 | 0 |
| nigeria | | bacillus amyloliquefaciens | species | 45 | 0 |
| nigeria | lagos | bacillus amyloliquefaciens | species | 64 | 0 |
| pakistan | | bacillus amyloliquefaciens | species | 63 | 0 |
| pakistan | balochistan province | bacillus amyloliquefaciens | species | 1 | 0 |
| pakistan | islamabad capital territory | bacillus amyloliquefaciens | species | 1 | 0 |
| pakistan | punjab province | bacillus amyloliquefaciens | species | 3 | 0 |
| peru | huancavelica region | bacillus amyloliquefaciens | species | 5 | 0 |
| peru | puno region | bacillus amyloliquefaciens | species | 2 | 0 |
| philippines | | bacillus amyloliquefaciens | species | 2 | 0 |
| poland | | bacillus amyloliquefaciens | species | 2 | 0 |
| poland | greater poland province | bacillus amyloliquefaciens | species | 5 | 0 |
| poland | lesser poland province | bacillus amyloliquefaciens | species | 1 | 0 |
| poland | podlasie province | bacillus amyloliquefaciens | species | 2 | 0 |
| portugal | | bacillus amyloliquefaciens | species | 118 | 0 |
| russia | | bacillus amyloliquefaciens | species | 2 | 0 |
| russia | primorsky krai | bacillus amyloliquefaciens | species | 2 | 0 |
| rwanda | | bacillus amyloliquefaciens | species | 1 | 0 |
| saudi arabia | | bacillus amyloliquefaciens | species | 10 | 0 |
| saudi arabia | madinah region | bacillus amyloliquefaciens | species | 2 | 0 |
| saudi arabia | makkah region | bacillus amyloliquefaciens | species | 2 | 0 |
| serbia | | bacillus amyloliquefaciens | species | 2812 | 0 |
| singapore | | bacillus amyloliquefaciens | species | 1 | 0 |
| slovakia | | bacillus amyloliquefaciens | species | 5 | 0 |
| south africa | | bacillus amyloliquefaciens | species | 10 | 0 |
| south korea | | bacillus amyloliquefaciens | species | 224 | 0 |
| south korea | | bacillus amyloliquefaciens cc178 | no rank | 2 | 0 |
| south korea | daegu city | bacillus amyloliquefaciens | species | 2 | 0 |
| south korea | incheon city | bacillus amyloliquefaciens | species | 1 | 0 |
| south korea | south gyeongsang province | bacillus amyloliquefaciens | species | 1 | 0 |
| south korea | ulsan city | bacillus amyloliquefaciens | species | 3 | 0 |
| spain | | bacillus amyloliquefaciens | species | 381 | 0 |
| sri lanka | | bacillus amyloliquefaciens | species | 3 | 0 |
| sweden | uppsala | bacillus amyloliquefaciens | species | 2 | 0 |
| switzerland | | bacillus amyloliquefaciens | species | 3 | 0 |
| switzerland | geneva region | bacillus amyloliquefaciens | species | 6 | 0 |
| switzerland | geneva region | bacillus amyloliquefaciens uasws ba1 | no rank | 50 | 0 |
| taiwan | | bacillus amyloliquefaciens | species | 9 | 0 |
| taiwan | taiwan municipality | bacillus amyloliquefaciens | species | 3 | 0 |
| tajikistan | | bacillus amyloliquefaciens | species | 14 | 0 |
| tanzania | | bacillus amyloliquefaciens | species | 2 | 0 |
| thailand | | bacillus amyloliquefaciens | species | 99 | 0 |
| thailand | chiang mai province | bacillus amyloliquefaciens | species | 9 | 0 |
| thailand | narathiwat province | bacillus amyloliquefaciens | species | 2 | 0 |
| thailand | samut prakan province | bacillus amyloliquefaciens | species | 34 | 0 |
| tunisia | | bacillus amyloliquefaciens | species | 49 | 0 |
| turkey | | bacillus amyloliquefaciens | species | 24 | 0 |
| turkey | antalya province | bacillus amyloliquefaciens | species | 247 | 0 |
| turkey | denizli province | bacillus amyloliquefaciens | species | 1 | 0 |
| ukraine | | bacillus amyloliquefaciens | species | 28 | 0 |
| ukraine | kiev city | bacillus amyloliquefaciens | species | 1 | 0 |
| united states | | bacillus amyloliquefaciens | species | 233 | 0 |
| united states | | bacillus velezensis fzb42 | no rank | 1 | 0 |
| united states | arizona | bacillus amyloliquefaciens | species | 1 | 0 |
| united states | arkansas | bacillus amyloliquefaciens | species | 51 | 0 |
| united states | california | bacillus amyloliquefaciens | species | 14 | 0 |
| united states | indiana | bacillus amyloliquefaciens | species | 5 | 0 |
| united states | maryland | bacillus amyloliquefaciens | species | 2 | 0 |
| united states | minnesota | bacillus amyloliquefaciens | species | 3 | 0 |
| united states | new hampshire | bacillus amyloliquefaciens | species | 158 | 0 |
| united states | wisconsin | bacillus amyloliquefaciens | species | 1 | 0 |
| uruguay | | bacillus amyloliquefaciens | species | 17 | 0 |
| vietnam | | bacillus amyloliquefaciens | species | 40 | 0 |
| vietnam | dak nong province | bacillus amyloliquefaciens | species | 2 | 0 |
| vietnam | gia lai province | bacillus amyloliquefaciens | species | 1 | 0 |
| vietnam | ha noi city | bacillus amyloliquefaciens | species | 1 | 0 |
| vietnam | hoa binh province | bacillus amyloliquefaciens | species | 1 | 0 |