| afghanistan | | hepatitis c virus | species | 101 | 0 |
| afghanistan | | royal farm virus | species | 3 | 0 |
| afghanistan | balkh province | hepatitis c virus | species | 38 | 5 |
| afghanistan | helmand province | japanese encephalitis virus | species | 0 | 1 |
| afghanistan | herat province | hepatitis c virus | species | 69 | 0 |
| afghanistan | kabul province | hepatitis c virus | species | 0 | 8 |
| afghanistan | nangarhar province | hepatitis c virus | species | 1 | 5 |
| aland islands | | flavivirus | genus | 0 | 1 |
| aland islands | | tick-borne encephalitis virus | species | 0 | 2 |
| albania | | gb virus c | species | 1 | 0 |
| albania | | hepatitis c virus | species | 50 | 0 |
| albania | | west nile virus | species | 1 | 0 |
| albania | tirana county | hepacivirus | genus | 0 | 1 |
| albania | tirana county | hepatitis c virus | species | 0 | 2 |
| algeria | | bovine viral diarrhea virus 1 | species | 1 | 0 |
| algeria | | hepatitis c virus subtype 4f | no rank | 2 | 0 |
| algeria | | phlebotomus flavivirus alg_f19 | species | 1 | 0 |
| algeria | | phlebotomus flavivirus alg_f8 | species | 1 | 0 |
| algeria | algiers province | hepatitis c virus | species | 0 | 1 |
| algeria | algiers province | hepatitis c virus subtype 5a | no rank | 3 | 0 |
| algeria | annaba province | hepatitis c virus | species | 0 | 1 |
| algeria | batna province | hepatitis c virus | species | 0 | 2 |
| algeria | blida province | west nile virus | species | 0 | 1 |
| algeria | jijel province | west nile virus | species | 0 | 1 |
| algeria | khenchela province | hepatitis c virus | species | 0 | 1 |
| algeria | m'sila province | west nile virus | species | 0 | 1 |
| algeria | oum el-bouaghi province | hepatitis c virus | species | 0 | 1 |
| algeria | tebessa province | hepatitis c virus | species | 0 | 1 |
| american samoa | | dengue virus | species | 0 | 5 |
| american samoa | | dengue virus 2 | no rank | 14 | 2 |
| american samoa | | hepacivirus | genus | 0 | 1 |
| american samoa | | hepatitis c virus | species | 0 | 1 |
| american samoa | | zika virus | species | 0 | 2 |
| andorra | | border disease virus | species | 4 | 1 |
| andorra | | bovine viral diarrhea virus 1 | species | 0 | 1 |
| andorra | | hepatitis c virus | species | 1 | 0 |
| angola | | dengue virus 1 | no rank | 10 | 0 |
| angola | | dengue virus 4 | no rank | 1 | 0 |
| angola | | hepatitis c virus | species | 10 | 0 |
| angola | | japanese encephalitis virus | species | 1 | 0 |
| angola | | yellow fever virus | species | 4 | 0 |
| angola | bengo province | zika virus | species | 1 | 0 |
| angola | huambo province | classical swine fever virus | species | 0 | 1 |
| angola | luanda province | anopheles flavivirus | species | 3 | 0 |
| angola | luanda province | dengue virus | species | 0 | 8 |
| angola | luanda province | dengue virus 2 | no rank | 1 | 0 |
| angola | luanda province | hepatitis c virus | species | 0 | 2 |
| angola | luanda province | yellow fever virus | species | 0 | 2 |
| angola | luanda province | zika virus | species | 1 | 0 |
| angola | malanje province | dengue virus | species | 0 | 1 |
| anguilla | | dengue virus 3 | no rank | 1 | 0 |
| antarctica | | gadgets gully virus | species | 1 | 0 |
| antigua and barbuda | | dengue virus | species | 0 | 1 |
| antigua and barbuda | | dengue virus 3 | no rank | 3 | 0 |
| antigua and barbuda | saint john parish | dengue virus 3 | no rank | 2 | 0 |
| argentina | | bovine viral diarrhea virus 1 | species | 109 | 0 |
| argentina | | bovine viral diarrhea virus 1a | no rank | 1 | 0 |
| argentina | | bovine viral diarrhea virus 2 | no rank | 8 | 0 |
| argentina | | bovine viral diarrhea virus 3 | species | 6 | 0 |
| argentina | | bovine viral diarrhea virus type 1b | no rank | 9 | 0 |
| argentina | | classical swine fever virus | species | 5 | 0 |
| argentina | | culex flavivirus | species | 3 | 0 |
| argentina | | dengue virus 1 | no rank | 82 | 0 |
| argentina | | dengue virus 2 | no rank | 3 | 0 |
| argentina | | dengue virus 3 | no rank | 8 | 0 |
| argentina | | flaviviridae sp. | species | 8 | 0 |
| argentina | | gb virus c | species | 119 | 0 |
| argentina | | hepatitis c virus | species | 4681 | 0 |
| argentina | | hepatitis c virus genotype 1 | no rank | 7 | 0 |
| argentina | | hepatitis c virus genotype 2 | no rank | 7 | 0 |
| argentina | | hepatitis c virus genotype 4 | no rank | 4 | 0 |
| argentina | | hepatitis c virus subtype 1a | no rank | 20 | 0 |
| argentina | | hepatitis c virus subtype 1b | no rank | 447 | 0 |
| argentina | | hepatitis c virus subtype 2c | no rank | 18 | 0 |
| argentina | | hepatitis c virus subtype 3a | no rank | 8 | 0 |
| argentina | | hepatitis c virus subtype 4a | no rank | 1 | 0 |
| argentina | | pestivirus isolate 17p | no rank | 1 | 0 |
| argentina | | pestivirus isolate 1r | no rank | 1 | 0 |
| argentina | | pestivirus isolate 1r93 | no rank | 1 | 0 |
| argentina | | pestivirus isolate 25h | no rank | 1 | 0 |
| argentina | | pestivirus isolate 2b | no rank | 1 | 0 |
| argentina | | pestivirus isolate 318 | no rank | 1 | 0 |
| argentina | | pestivirus isolate 34b | no rank | 1 | 0 |
| argentina | | pestivirus isolate 354 | no rank | 1 | 0 |
| argentina | | pestivirus isolate 3p | no rank | 1 | 0 |
| argentina | | pestivirus isolate 4h | no rank | 1 | 0 |
| argentina | | pestivirus isolate 65.2 | no rank | 1 | 0 |
| argentina | | pestivirus isolate 66.1 | no rank | 1 | 0 |
| argentina | | pestivirus isolate 66.3 | no rank | 1 | 0 |
| argentina | | pestivirus isolate 66.5 | no rank | 1 | 0 |
| argentina | | pestivirus isolate 66.6 | no rank | 1 | 0 |
| argentina | | pestivirus isolate 68.88 | no rank | 1 | 0 |
| argentina | | pestivirus isolate 76865 | no rank | 1 | 0 |
| argentina | | pestivirus isolate 86713 | no rank | 1 | 0 |
| argentina | | pestivirus isolate s21 | no rank | 1 | 0 |
| argentina | | pestivirus isolate tfb | no rank | 1 | 0 |
| argentina | | st. louis encephalitis virus | species | 7 | 1 |
| argentina | | west nile virus | species | 9 | 3 |
| argentina | | yellow fever virus | species | 8 | 0 |
| argentina | | zika virus | species | 2 | 0 |
| argentina | buenos aires city | bovine viral diarrhea virus 1 | species | 2 | 4 |
| argentina | buenos aires city | dengue virus | species | 0 | 9 |
| argentina | buenos aires city | dengue virus 1 | no rank | 0 | 1 |
| argentina | buenos aires city | gb virus c | species | 0 | 1 |
| argentina | buenos aires city | hepacivirus | genus | 0 | 7 |
| argentina | buenos aires city | hepatitis c virus | species | 0 | 14 |
| argentina | buenos aires city | st. louis encephalitis virus | species | 1 | 1 |
| argentina | buenos aires city | west nile virus | species | 0 | 1 |
| argentina | buenos aires province | bovine viral diarrhea virus 1 | species | 4 | 5 |
| argentina | buenos aires province | bovine viral diarrhea virus 1a | no rank | 31 | 0 |
| argentina | buenos aires province | bovine viral diarrhea virus 2 | no rank | 2 | 0 |
| argentina | buenos aires province | bovine viral diarrhea virus 2b | no rank | 6 | 0 |
| argentina | buenos aires province | bovine viral diarrhea virus type 1b | no rank | 226 | 0 |
| argentina | buenos aires province | dengue virus | species | 0 | 6 |
| argentina | buenos aires province | dengue virus 1 | no rank | 25 | 1 |
| argentina | buenos aires province | gb virus c | species | 0 | 1 |
| argentina | buenos aires province | hepacivirus | genus | 0 | 8 |
| argentina | buenos aires province | hepatitis c virus | species | 0 | 13 |
| argentina | buenos aires province | st. louis encephalitis virus | species | 2 | 0 |
| argentina | buenos aires province | west nile virus | species | 0 | 1 |
| argentina | chaco province | culex flavivirus | species | 7 | 0 |
| argentina | chaco province | dengue virus | species | 0 | 2 |
| argentina | chaco province | flavivirus | genus | 0 | 1 |
| argentina | chaco province | st. louis encephalitis virus | species | 1 | 4 |
| argentina | chaco province | zika virus | species | 1 | 0 |
| argentina | chubut province | st. louis encephalitis virus | species | 0 | 1 |
| argentina | cordoba province | bovine viral diarrhea virus 1 | species | 0 | 2 |
| argentina | cordoba province | cell fusing agent virus | species | 3 | 0 |
| argentina | cordoba province | classical swine fever virus | species | 0 | 1 |
| argentina | cordoba province | culex flavivirus | species | 32 | 0 |
| argentina | cordoba province | dengue virus | species | 0 | 2 |
| argentina | cordoba province | dengue virus 2 | no rank | 0 | 1 |
| argentina | cordoba province | flavivirus | genus | 0 | 3 |
| argentina | cordoba province | flavivirus cbaar4001 | species | 1 | 0 |
| argentina | cordoba province | gb virus c | species | 0 | 1 |
| argentina | cordoba province | hepacivirus | genus | 0 | 3 |
| argentina | cordoba province | hepatitis c virus | species | 0 | 4 |
| argentina | cordoba province | japanese encephalitis virus | species | 0 | 2 |
| argentina | cordoba province | kamiti river virus | species | 1 | 0 |
| argentina | cordoba province | st. louis encephalitis virus | species | 26 | 9 |
| argentina | corrientes province | bovine viral diarrhea virus 1 | species | 8 | 0 |
| argentina | corrientes province | bovine viral diarrhea virus 2 | no rank | 1 | 0 |
| argentina | corrientes province | culex flavivirus | species | 0 | 1 |
| argentina | corrientes province | dengue virus | species | 0 | 3 |
| argentina | corrientes province | flavivirus | genus | 0 | 1 |
| argentina | corrientes province | st. louis encephalitis virus | species | 0 | 2 |
| argentina | corrientes province | west nile virus | species | 0 | 1 |
| argentina | corrientes province | yellow fever virus | species | 0 | 1 |
| argentina | entre rios province | dengue virus | species | 0 | 1 |
| argentina | entre rios province | dengue virus 1 | no rank | 1 | 0 |
| argentina | entre rios province | flavivirus | genus | 0 | 1 |
| argentina | entre rios province | hepatitis c virus | species | 0 | 2 |
| argentina | formosa province | dengue virus | species | 0 | 5 |
| argentina | formosa province | dengue virus 1 | no rank | 1 | 0 |
| argentina | formosa province | flavivirus | genus | 0 | 2 |
| argentina | formosa province | st. louis encephalitis virus | species | 0 | 1 |
| argentina | jujuy province | bovine viral diarrhea virus 1 | species | 0 | 4 |
| argentina | jujuy province | dengue virus | species | 0 | 1 |
| argentina | la rioja province | dengue virus | species | 0 | 1 |
| argentina | la rioja province | flavivirus | genus | 0 | 1 |
| argentina | mendoza province | dengue virus | species | 0 | 2 |
| argentina | mendoza province | dengue virus 2 | no rank | 0 | 2 |
| argentina | misiones province | dengue virus | species | 0 | 9 |
| argentina | misiones province | dengue virus 1 | no rank | 1 | 0 |
| argentina | misiones province | flavivirus | genus | 0 | 1 |
| argentina | misiones province | yellow fever virus | species | 0 | 2 |
| argentina | rio negro province | bovine viral diarrhea virus 1 | species | 0 | 1 |
| argentina | rio negro province | dengue virus | species | 0 | 1 |
| argentina | rio negro province | st. louis encephalitis virus | species | 0 | 1 |
| argentina | salta province | dengue virus | species | 0 | 9 |
| argentina | salta province | dengue virus 2 | no rank | 0 | 1 |
| argentina | salta province | dengue virus 4 | no rank | 0 | 1 |
| argentina | salta province | flavivirus | genus | 0 | 1 |
| argentina | san juan province | dengue virus | species | 0 | 1 |
| argentina | san juan province | dengue virus 2 | no rank | 0 | 1 |
| argentina | san luis province | dengue virus | species | 0 | 2 |
| argentina | san luis province | dengue virus 2 | no rank | 0 | 2 |
| argentina | san luis province | flavivirus | genus | 0 | 1 |
| argentina | san luis province | west nile virus | species | 0 | 1 |
| argentina | santa fe province | bovine viral diarrhea virus type 1b | no rank | 2 | 0 |
| argentina | santa fe province | flavivirus | genus | 0 | 2 |
| argentina | santa fe province | hepacivirus | genus | 0 | 1 |
| argentina | santa fe province | hepatitis c virus | species | 0 | 1 |
| argentina | santa fe province | st. louis encephalitis virus | species | 0 | 6 |
| argentina | santa fe province | west nile virus | species | 0 | 1 |
| argentina | tucuman province | dengue virus 1 | no rank | 1 | 0 |
| argentina | tucuman province | st. louis encephalitis virus | species | 1 | 0 |
| armenia | | hepatitis c virus | species | 3 | 0 |
| aruba | | dengue virus 1 | no rank | 2 | 0 |
| aruba | | dengue virus 2 | no rank | 1 | 0 |
| aruba | | dengue virus 3 | no rank | 1 | 0 |
| australia | | alfuy virus | no rank | 2 | 2 |
| australia | | bamaga virus | species | 2 | 0 |
| australia | | binjari virus | species | 1 | 0 |
| australia | | bovine viral diarrhea virus 1 | species | 123 | 0 |
| australia | | bovine viral diarrhea virus 3 | species | 17 | 0 |
| australia | | bovine viral diarrhea virus strain bega | no rank | 1 | 0 |
| australia | | bovine viral diarrhea virus strain braidwood | no rank | 1 | 0 |
| australia | | bovine viral diarrhea virus strain trangie y546 | no rank | 1 | 0 |
| australia | | cell fusing agent virus | species | 1 | 0 |
| australia | | dengue virus | species | 3 | 7 |
| australia | | dengue virus 1 | no rank | 35 | 0 |
| australia | | dengue virus 2 | no rank | 36 | 1 |
| australia | | dengue virus 3 | no rank | 16 | 0 |
| australia | | dengue virus 4 | no rank | 11 | 0 |
| australia | | eastern red scorpionfish flavivirus | species | 1 | 0 |
| australia | | edge hill virus | species | 4 | 2 |
| australia | | gadgets gully virus | species | 1 | 0 |
| australia | | gb virus c | species | 81 | 0 |
| australia | | gecko hepacivirus | species | 1 | 0 |
| australia | | gudgenby flavi-like virus | species | 1 | 0 |
| australia | | hepatitis c virus | species | 1247 | 0 |
| australia | | hepatitis c virus subtype 1a | no rank | 61 | 0 |
| australia | | hepatitis c virus subtype 2b | no rank | 1 | 0 |
| australia | | hepatitis c virus subtype 3a | no rank | 28 | 0 |
| australia | | human pegivirus | no rank | 1 | 0 |
| australia | | japanese encephalitis virus | species | 4 | 11 |
| australia | | jogalong virus | species | 1 | 0 |
| australia | | koala hepacivirus | species | 1 | 0 |
| australia | | kokobera virus | species | 2 | 2 |
| australia | | kunjin virus | no rank | 33 | 5 |
| australia | | murray valley encephalitis virus | species | 200 | 9 |
| australia | | palm creek virus | species | 3 | 0 |
| australia | | parramatta river virus | species | 2 | 0 |
| australia | | pestivirus isolate hay 87/2210 | no rank | 1 | 0 |
| australia | | porcine pestivirus isolate bungowannah | no rank | 29 | 0 |
| australia | | possum hepacivrus | species | 1 | 0 |
| australia | | saumarez reef virus | species | 1 | 0 |
| australia | | southern pygmy squid flavivirus | species | 1 | 0 |
| australia | | stratford virus | no rank | 3 | 2 |
| australia | | west nile virus | species | 6 | 12 |
| australia | | zika virus | species | 2 | 0 |
| australia | australian capital territory | hepacivirus | genus | 0 | 1 |
| australia | australian capital territory | hepatitis c virus | species | 0 | 5 |
| australia | australian capital territory | japanese encephalitis virus | species | 0 | 1 |
| australia | australian capital territory | kunjin virus | no rank | 0 | 1 |
| australia | australian capital territory | murray valley encephalitis virus | species | 0 | 1 |
| australia | new south wales | border disease virus | species | 0 | 1 |
| australia | new south wales | bovine viral diarrhea virus 1 | species | 0 | 1 |
| australia | new south wales | bovine viral diarrhea virus 2 | no rank | 0 | 1 |
| australia | new south wales | classical swine fever virus | species | 0 | 1 |
| australia | new south wales | dairy swamp virus | species | 2 | 0 |
| australia | new south wales | dengue virus | species | 0 | 13 |
| australia | new south wales | dengue virus 2 | no rank | 0 | 1 |
| australia | new south wales | edge hill virus | species | 137 | 0 |
| australia | new south wales | flavivirus | genus | 0 | 19 |
| australia | new south wales | haslams creek virus | species | 3 | 0 |
| australia | new south wales | hepacivirus | genus | 0 | 26 |
| australia | new south wales | hepatitis c virus | species | 0 | 105 |
| australia | new south wales | japanese encephalitis virus | species | 0 | 7 |
| australia | new south wales | kokobera virus | species | 0 | 1 |
| australia | new south wales | kunjin virus | no rank | 23 | 11 |
| australia | new south wales | mac peak virus | species | 5 | 0 |
| australia | new south wales | murray valley encephalitis virus | species | 0 | 18 |
| australia | new south wales | pestivirus | genus | 0 | 7 |
| australia | new south wales | porcine pestivirus isolate bungowannah | no rank | 0 | 4 |
| australia | new south wales | saumarez reef virus | species | 0 | 1 |
| australia | new south wales | stratford virus | no rank | 45 | 0 |
| australia | new south wales | west nile virus | species | 0 | 5 |
| australia | new south wales | yellow fever virus | species | 0 | 1 |
| australia | northern territory | aedes flavivirus | species | 0 | 1 |
| australia | northern territory | calbertado virus | species | 0 | 1 |
| australia | northern territory | chaoyang virus | species | 0 | 1 |
| australia | northern territory | dengue virus | species | 0 | 8 |
| australia | northern territory | edge hill virus | species | 1 | 0 |
| australia | northern territory | fitzroy river virus | species | 0 | 1 |
| australia | northern territory | flavivirus | genus | 0 | 13 |
| australia | northern territory | hepatitis c virus | species | 0 | 6 |
| australia | northern territory | japanese encephalitis virus | species | 0 | 8 |
| australia | northern territory | kamiti river virus | species | 0 | 1 |
| australia | northern territory | kokobera virus | species | 0 | 1 |
| australia | northern territory | kunjin virus | no rank | 3 | 11 |
| australia | northern territory | lammi virus | species | 0 | 1 |
| australia | northern territory | murray valley encephalitis virus | species | 0 | 16 |
| australia | northern territory | nakiwogo virus | species | 0 | 1 |
| australia | northern territory | palm creek virus | species | 0 | 1 |
| australia | northern territory | quang binh virus | species | 0 | 1 |
| australia | northern territory | sepik virus | species | 0 | 1 |
| australia | northern territory | wesselsbron virus | species | 0 | 1 |
| australia | northern territory | west nile virus | species | 0 | 6 |
| australia | northern territory | yellow fever virus | species | 0 | 2 |
| australia | northern territory | yellow fever virus group | subgenus | 0 | 1 |
| australia | queensland | alfuy virus | no rank | 0 | 1 |
| australia | queensland | dairy swamp virus | species | 1 | 0 |
| australia | queensland | dengue virus | species | 0 | 110 |
| australia | queensland | dengue virus 1 | no rank | 3 | 1 |
| australia | queensland | dengue virus 2 | no rank | 8 | 9 |
| australia | queensland | dengue virus 3 | no rank | 2 | 1 |
| australia | queensland | dengue virus 4 | no rank | 1 | 1 |
| australia | queensland | edge hill virus | species | 2 | 1 |
| australia | queensland | flavivirus | genus | 0 | 18 |
| australia | queensland | gb virus c | species | 0 | 2 |
| australia | queensland | hepacivirus | genus | 0 | 2 |
| australia | queensland | hepatitis c virus | species | 0 | 17 |
| australia | queensland | japanese encephalitis virus | species | 21 | 30 |
| australia | queensland | kokobera virus | species | 0 | 5 |
| australia | queensland | kunjin virus | no rank | 13 | 10 |
| australia | queensland | murray valley encephalitis virus | species | 13 | 20 |
| australia | queensland | new mapoon virus | no rank | 2 | 0 |
| australia | queensland | pestivirus | genus | 0 | 4 |
| australia | queensland | saumarez reef virus | species | 2 | 0 |
| australia | queensland | stratford virus | no rank | 4 | 0 |
| australia | queensland | west nile virus | species | 0 | 10 |
| australia | queensland | yellow fever virus | species | 0 | 1 |
| australia | south australia | dengue virus | species | 0 | 1 |
| australia | south australia | flavivirus | genus | 0 | 3 |
| australia | south australia | hepacivirus | genus | 0 | 4 |
| australia | south australia | hepatitis c virus | species | 0 | 12 |
| australia | south australia | japanese encephalitis virus | species | 0 | 10 |
| australia | south australia | kokobera virus | species | 0 | 1 |
| australia | south australia | kunjin virus | no rank | 1 | 2 |
| australia | south australia | murray valley encephalitis virus | species | 0 | 3 |
| australia | south australia | pestivirus | genus | 0 | 1 |
| australia | south australia | stratford virus | no rank | 0 | 1 |
| australia | south australia | west nile virus | species | 0 | 1 |
| australia | tasmania | dengue virus | species | 0 | 1 |
| australia | tasmania | gadgets gully virus | species | 4 | 0 |
| australia | tasmania | hepatitis c virus | species | 0 | 1 |
| australia | tasmania | japanese encephalitis virus | species | 0 | 2 |
| australia | tasmania | kunjin virus | no rank | 0 | 1 |
| australia | tasmania | murray valley encephalitis virus | species | 0 | 1 |
| australia | victoria | alfuy virus | no rank | 0 | 1 |
| australia | victoria | bovine viral diarrhea virus 1 | species | 0 | 1 |
| australia | victoria | dengue virus | species | 0 | 1 |
| australia | victoria | dengue virus 2 | no rank | 0 | 1 |
| australia | victoria | flavivirus | genus | 0 | 9 |
| australia | victoria | hepacivirus | genus | 0 | 16 |
| australia | victoria | hepatitis c virus | species | 0 | 55 |
| australia | victoria | japanese encephalitis virus | species | 0 | 3 |
| australia | victoria | karumba virus | species | 1 | 0 |
| australia | victoria | kunjin virus | no rank | 1 | 7 |
| australia | victoria | murray valley encephalitis virus | species | 0 | 10 |
| australia | victoria | pestivirus | genus | 0 | 1 |
| australia | victoria | saumarez reef virus | species | 0 | 1 |
| australia | victoria | west nile virus | species | 0 | 3 |
| australia | western australia | alfuy virus | no rank | 0 | 2 |
| australia | western australia | dengue virus | species | 0 | 15 |
| australia | western australia | dengue virus 2 | no rank | 0 | 1 |
| australia | western australia | edge hill virus | species | 3 | 2 |
| australia | western australia | fitzroy river virus | species | 1 | 1 |
| australia | western australia | flavivirus | genus | 0 | 54 |
| australia | western australia | hepacivirus | genus | 0 | 2 |
| australia | western australia | hepatitis c virus | species | 0 | 12 |
| australia | western australia | japanese encephalitis virus | species | 0 | 32 |
| australia | western australia | karumba virus | species | 28 | 0 |
| australia | western australia | kokobera virus | species | 1 | 4 |
| australia | western australia | kunjin virus | no rank | 3 | 19 |
| australia | western australia | murray valley encephalitis virus | species | 1 | 69 |
| australia | western australia | sepik virus | species | 0 | 1 |
| australia | western australia | st. louis encephalitis virus | species | 0 | 3 |
| australia | western australia | tick-borne encephalitis virus | species | 0 | 1 |
| australia | western australia | wesselsbron virus | species | 0 | 1 |
| australia | western australia | west nile virus | species | 0 | 16 |
| australia | western australia | yellow fever virus | species | 0 | 3 |
| australia | western australia | yellow fever virus group | subgenus | 0 | 1 |
| austria | | atypical porcine pestivirus | no rank | 1 | 0 |
| austria | | atypical porcine pestivirus 1 | species | 8 | 0 |
| austria | | border disease virus | species | 1 | 0 |
| austria | | bovine viral diarrhea virus 1 | species | 42 | 0 |
| austria | | bovine viral diarrhea virus 2 | no rank | 2 | 0 |
| austria | | classical swine fever virus | species | 2 | 0 |
| austria | | equine hepacivirus | species | 30 | 0 |
| austria | | hepatitis c virus | species | 1660 | 0 |
| austria | | linda virus | species | 4 | 0 |
| austria | | rodent hepacivirus | species | 1 | 0 |
| austria | | tick-borne encephalitis virus | species | 3 | 0 |
| austria | | usutu virus | species | 25 | 3 |
| austria | | west nile virus | species | 30 | 3 |
| austria | burgenland | flavivirus | genus | 0 | 1 |
| austria | burgenland | hepatitis c virus | species | 0 | 1 |
| austria | burgenland | tick-borne encephalitis virus | species | 0 | 1 |
| austria | burgenland | usutu virus | species | 0 | 2 |
| austria | burgenland | west nile virus | species | 1 | 0 |
| austria | burgenland | west nile virus 1 | no rank | 2 | 0 |
| austria | carinthia | border disease virus | species | 0 | 1 |
| austria | carinthia | bovine viral diarrhea virus 1 | species | 0 | 1 |
| austria | carinthia | bovine viral diarrhea virus 2 | no rank | 0 | 1 |
| austria | carinthia | hepatitis c virus | species | 0 | 2 |
| austria | carinthia | pestivirus | genus | 0 | 1 |
| austria | carinthia | tick-borne encephalitis virus | species | 0 | 1 |
| austria | carinthia | usutu virus | species | 3 | 0 |
| austria | lower austria | border disease virus | species | 0 | 1 |
| austria | lower austria | bovine viral diarrhea virus 1 | species | 0 | 4 |
| austria | lower austria | bovine viral diarrhea virus 2 | no rank | 0 | 1 |
| austria | lower austria | flavivirus | genus | 0 | 1 |
| austria | lower austria | hepacivirus | genus | 0 | 1 |
| austria | lower austria | hepatitis c virus | species | 0 | 2 |
| austria | lower austria | pestivirus | genus | 0 | 1 |
| austria | lower austria | tick-borne encephalitis virus | species | 0 | 4 |
| austria | lower austria | usutu virus | species | 93 | 2 |
| austria | lower austria | west nile virus | species | 0 | 1 |
| austria | lower austria | west nile virus 2 | no rank | 2 | 0 |
| austria | salzburg | hepatitis c virus | species | 0 | 2 |
| austria | salzburg | japanese encephalitis virus | species | 0 | 1 |
| austria | styria | bovine viral diarrhea virus 1 | species | 0 | 2 |
| austria | styria | bovine viral diarrhea virus 2 | no rank | 0 | 1 |
| austria | styria | flavivirus | genus | 0 | 1 |
| austria | styria | pestivirus | genus | 0 | 1 |
| austria | styria | tick-borne encephalitis virus | species | 0 | 10 |
| austria | styria | usutu virus | species | 15 | 2 |
| austria | styria | west nile virus | species | 0 | 1 |
| austria | tyrol | border disease virus | species | 0 | 1 |
| austria | tyrol | bovine viral diarrhea virus 1 | species | 0 | 1 |
| austria | tyrol | bovine viral diarrhea virus 2 | no rank | 0 | 2 |
| austria | tyrol | hepacivirus | genus | 0 | 1 |
| austria | tyrol | hepatitis c virus | species | 0 | 1 |
| austria | tyrol | pestivirus | genus | 0 | 2 |
| austria | tyrol | tick-borne encephalitis virus | species | 0 | 2 |
| austria | upper austria | hepacivirus | genus | 0 | 1 |
| austria | upper austria | hepatitis c virus | species | 0 | 1 |
| austria | upper austria | tick-borne encephalitis virus | species | 0 | 1 |
| austria | upper austria | usutu virus | species | 2 | 0 |
| austria | vienna | anopheles flavivirus | species | 30 | 0 |
| austria | vienna | dengue virus | species | 0 | 2 |
| austria | vienna | flavivirus | genus | 0 | 4 |
| austria | vienna | hepacivirus | genus | 0 | 4 |
| austria | vienna | hepatitis c virus | species | 0 | 8 |
| austria | vienna | japanese encephalitis virus | species | 0 | 2 |
| austria | vienna | tick-borne encephalitis virus | species | 0 | 4 |
| austria | vienna | usutu virus | species | 9 | 7 |
| austria | vienna | west nile virus | species | 10 | 8 |
| austria | vienna | west nile virus 1 | no rank | 3 | 0 |
| austria | vienna | west nile virus 2 | no rank | 8 | 0 |
| austria | vorarlberg | border disease virus | species | 0 | 2 |
| austria | vorarlberg | bovine viral diarrhea virus 1 | species | 0 | 2 |
| austria | vorarlberg | bovine viral diarrhea virus 2 | no rank | 0 | 2 |
| austria | vorarlberg | hepatitis c virus | species | 0 | 2 |
| austria | vorarlberg | pestivirus | genus | 0 | 2 |
| austria | vorarlberg | tick-borne encephalitis virus | species | 0 | 1 |
| azerbaijan | | hepatitis c virus | species | 5 | 0 |
| azerbaijan | | west nile virus | species | 7 | 0 |
| azerbaijan | agdam district | hepatitis c virus | species | 39 | 0 |
| azerbaijan | astara district | hepatitis c virus | species | 2 | 0 |
| azerbaijan | baku city | hepacivirus | genus | 0 | 1 |
| azerbaijan | baku city | hepatitis c virus | species | 43 | 1 |
| azerbaijan | baku city | west nile virus | species | 0 | 1 |
| azerbaijan | balakan district | hepatitis c virus | species | 4 | 0 |
| azerbaijan | barda district | hepatitis c virus | species | 11 | 0 |
| azerbaijan | east azerbaijan province | hepatitis c virus | species | 13 | 0 |
| azerbaijan | ganja city | hepatitis c virus | species | 12 | 0 |
| azerbaijan | goygol district | hepatitis c virus | species | 22 | 0 |
| azerbaijan | jalilabad district | hepatitis c virus | species | 29 | 0 |
| azerbaijan | kurdamir district | hepatitis c virus | species | 8 | 0 |
| azerbaijan | lankaran city | hepatitis c virus | species | 32 | 0 |
| azerbaijan | masally district | hepatitis c virus | species | 10 | 0 |
| azerbaijan | nakhchivan autonomous republic | hepacivirus | genus | 0 | 1 |
| azerbaijan | nakhchivan autonomous republic | hepatitis c virus | species | 0 | 1 |
| azerbaijan | neftchala district | hepatitis c virus | species | 6 | 0 |
| azerbaijan | siazan district | hepatitis c virus | species | 4 | 0 |
| azerbaijan | sumqayit city | hepatitis c virus | species | 5 | 0 |
| azerbaijan | yevlakh city | hepatitis c virus | species | 12 | 0 |
| azerbaijan | zardab district | hepatitis c virus | species | 8 | 0 |
| bahamas | | dengue virus 1 | no rank | 1 | 0 |
| bahamas | | dengue virus 2 | no rank | 1 | 0 |
| bahamas | | dengue virus 4 | no rank | 3 | 0 |
| bahrain | | hepatitis c virus | species | 0 | 3 |
| bangladesh | | bat pegivirus | no rank | 17 | 0 |
| bangladesh | | bovine viral diarrhea virus 3 | species | 3 | 0 |
| bangladesh | | classical swine fever virus | species | 10 | 0 |
| bangladesh | | dengue virus 1 | no rank | 23 | 0 |
| bangladesh | | dengue virus 2 | no rank | 129 | 0 |
| bangladesh | | dengue virus 3 | no rank | 70 | 1 |
| bangladesh | | hepatitis c virus | species | 26 | 0 |
| bangladesh | | hepatitis c virus subtype 1b | no rank | 2 | 0 |
| bangladesh | | hepatitis c virus subtype 3a | no rank | 8 | 0 |
| bangladesh | | hepatitis c virus subtype 3b | no rank | 4 | 0 |
| bangladesh | | pegivirus b | species | 3 | 0 |
| bangladesh | | zika virus | species | 2 | 0 |
| bangladesh | chittagong division | dengue virus | species | 0 | 3 |
| bangladesh | chittagong division | japanese encephalitis virus | species | 0 | 1 |
| bangladesh | dhaka division | dengue virus | species | 0 | 24 |
| bangladesh | dhaka division | dengue virus 1 | no rank | 1 | 0 |
| bangladesh | dhaka division | dengue virus 2 | no rank | 9 | 0 |
| bangladesh | dhaka division | dengue virus 3 | no rank | 15 | 2 |
| bangladesh | dhaka division | hepacivirus | genus | 0 | 2 |
| bangladesh | dhaka division | hepatitis c virus | species | 0 | 10 |
| bangladesh | dhaka division | hepatitis c virus subtype 1b | no rank | 2 | 0 |
| bangladesh | dhaka division | hepatitis c virus subtype 3a | no rank | 5 | 0 |
| bangladesh | dhaka division | hepatitis c virus subtype 3b | no rank | 4 | 0 |
| bangladesh | dhaka division | japanese encephalitis virus | species | 0 | 2 |
| bangladesh | dhaka division | west nile virus | species | 0 | 1 |
| bangladesh | khulna division | hepatitis c virus | species | 0 | 1 |
| bangladesh | khulna division | japanese encephalitis virus | species | 0 | 1 |
| bangladesh | rajshahi division | japanese encephalitis virus | species | 0 | 1 |
| bangladesh | sylhet division | dengue virus | species | 0 | 1 |
| bangladesh | sylhet division | japanese encephalitis virus | species | 0 | 1 |
| barbados | | dengue virus | species | 0 | 13 |
| barbados | | dengue virus 1 | no rank | 10 | 0 |
| barbados | | dengue virus 2 | no rank | 3 | 0 |
| barbados | | dengue virus 3 | no rank | 8 | 0 |
| barbados | | dengue virus 4 | no rank | 3 | 0 |
| barbados | | west nile virus | species | 0 | 1 |
| barbados | | zika virus | species | 2 | 1 |
| belarus | | bovine viral diarrhea virus 2 | no rank | 1 | 0 |
| belarus | | hepatitis c virus | species | 125 | 0 |
| belarus | | hepatitis c virus subtype 1b | no rank | 1 | 0 |
| belarus | | tick-borne encephalitis virus | species | 2 | 0 |
| belarus | brest region | west nile virus | species | 0 | 1 |
| belarus | gomel region | hepatitis c virus | species | 7 | 0 |
| belarus | gomel region | west nile virus | species | 0 | 1 |
| belarus | minsk city | hepacivirus | genus | 0 | 1 |
| belarus | minsk city | hepatitis c virus | species | 3 | 1 |
| belarus | minsk region | hepacivirus | genus | 0 | 1 |
| belarus | minsk region | hepatitis c virus | species | 0 | 1 |
| belarus | vitebsk region | hepacivirus | genus | 0 | 1 |
| belarus | vitebsk region | hepatitis c virus | species | 0 | 1 |
| belgium | | bovine viral diarrhea virus 1 | species | 9 | 0 |
| belgium | | classical swine fever virus | species | 1 | 0 |
| belgium | | hepatitis c virus | species | 1907 | 0 |
| belgium | | hepatitis c virus subtype 1a | no rank | 3 | 0 |
| belgium | | hepatitis c virus subtype 1b | no rank | 3 | 0 |
| belgium | | usutu virus | species | 43 | 0 |
| belgium | | west nile virus | species | 3 | 1 |
| belgium | | yellow fever virus | species | 9 | 0 |
| belgium | bruxelles-capitale | hepacivirus | genus | 0 | 1 |
| belgium | bruxelles-capitale | hepatitis c virus | species | 0 | 5 |
| belgium | bruxelles-capitale | tick-borne encephalitis virus | species | 0 | 1 |
| belgium | flemish region | classical swine fever virus | species | 0 | 2 |
| belgium | flemish region | hepacivirus | genus | 0 | 6 |
| belgium | flemish region | hepatitis c virus | species | 0 | 11 |
| belgium | walloon region | hepacivirus | genus | 0 | 2 |
| belgium | walloon region | hepatitis c virus | species | 0 | 2 |
| belize | | dengue virus 1 | no rank | 4 | 0 |
| belize | | dengue virus 2 | no rank | 1 | 0 |
| belize | | dengue virus 3 | no rank | 3 | 0 |
| belize | stann creek district | hepatitis c virus | species | 0 | 1 |
| benin | | dengue virus 1 | no rank | 1 | 0 |
| benin | | dengue virus 2 | no rank | 1 | 0 |
| benin | | hepatitis c virus | species | 1 | 0 |
| benin | atlantique department | hepatitis c virus | species | 0 | 1 |
| benin | littoral department | hepacivirus | genus | 0 | 1 |
| benin | littoral department | hepatitis c virus | species | 0 | 2 |
| benin | oueme department | dengue virus 3 | no rank | 379 | 0 |
| bhutan | | dengue virus 1 | no rank | 33 | 0 |
| bhutan | | dengue virus 2 | no rank | 2 | 0 |
| bhutan | | dengue virus 3 | no rank | 19 | 0 |
| bhutan | chhukha district | dengue virus 1 | no rank | 9 | 0 |
| bhutan | chhukha district | dengue virus 2 | no rank | 5 | 0 |
| bhutan | samdrup jongkhar district | dengue virus 1 | no rank | 5 | 0 |
| bhutan | samtse district | dengue virus 1 | no rank | 15 | 0 |
| bhutan | sarpang district | japanese encephalitis virus | species | 0 | 1 |
| bolivia | | dengue virus | species | 2 | 0 |
| bolivia | | dengue virus 1 | no rank | 1 | 0 |
| bolivia | | dengue virus 2 | no rank | 1 | 0 |
| bolivia | | dengue virus 3 | no rank | 5 | 0 |
| bolivia | | gb virus c | species | 48 | 0 |
| bolivia | | hepatitis c virus | species | 7 | 0 |
| bolivia | | ilheus virus | species | 1 | 0 |
| bolivia | | mansonia flavivirus | species | 1 | 0 |
| bolivia | | ochlerotatus scapularis flavivirus | species | 1 | 0 |
| bolivia | | psorophora flavivirus | species | 1 | 0 |
| bolivia | | yellow fever virus | species | 15 | 0 |
| bolivia | beni department | dengue virus 2 | no rank | 5 | 0 |
| bolivia | cochabamba department | hepatitis c virus | species | 0 | 1 |
| bolivia | santa cruz department | dengue virus | species | 0 | 5 |
| bolivia | santa cruz department | dengue virus 2 | no rank | 6 | 1 |
| bolivia | santa cruz department | hepatitis c virus | species | 0 | 2 |
| bolivia | santa cruz department | west nile virus | species | 0 | 1 |
| bolivia | santa cruz department | yellow fever virus | species | 0 | 1 |
| bolivia | tarija department | bovine viral diarrhea virus 1 | species | 0 | 1 |
| bolivia | tarija department | st. louis encephalitis virus | species | 0 | 1 |
| bonaire, saint eustatius and saba | | dengue virus | species | 0 | 1 |
| bosnia and herzegovina | | flaviviridae sp. 2018_bih | species | 1 | 0 |
| bosnia and herzegovina | | hepatitis c virus | species | 1 | 0 |
| bosnia and herzegovina | | tick-borne encephalitis virus | species | 6 | 0 |
| bosnia and herzegovina | republika srpska | hepatitis c virus | species | 0 | 1 |
| botswana | | gb virus c | species | 27 | 0 |
| botswana | | hepatitis c virus | species | 6 | 0 |
| brazil | | aedes flavivirus | species | 1 | 0 |
| brazil | | atypical porcine pestivirus | no rank | 8 | 0 |
| brazil | | bovine hepacivirus | species | 3 | 0 |
| brazil | | bovine hepacivirus n | species | 1 | 0 |
| brazil | | bovine viral diarrhea virus 1 | species | 237 | 0 |
| brazil | | bovine viral diarrhea virus 1d | no rank | 1 | 0 |
| brazil | | bovine viral diarrhea virus 2 | no rank | 92 | 0 |
| brazil | | bovine viral diarrhea virus 3 | species | 88 | 0 |
| brazil | | bussuquara virus | no rank | 2 | 1 |
| brazil | | cacipacore virus | species | 5 | 0 |
| brazil | | cell fusing agent virus | species | 3 | 0 |
| brazil | | chacorore flavivirus | species | 1 | 0 |
| brazil | | classical swine fever virus | species | 13 | 0 |
| brazil | | culex flavivirus | species | 24 | 0 |
| brazil | | dengue virus | species | 108 | 21 |
| brazil | | dengue virus 1 | no rank | 159 | 1 |
| brazil | | dengue virus 2 | no rank | 281 | 1 |
| brazil | | dengue virus 3 | no rank | 348 | 3 |
| brazil | | dengue virus 4 | no rank | 525 | 2 |
| brazil | | equine hepacivirus | species | 92 | 0 |
| brazil | | equine pegivirus | no rank | 16 | 0 |
| brazil | | flavivirus sp. | species | 14 | 0 |
| brazil | | gb virus c | species | 119 | 0 |
| brazil | | guapiacu virus | species | 7 | 0 |
| brazil | | hepacivirus a | species | 2 | 0 |
| brazil | | hepacivirus n | species | 14 | 0 |
| brazil | | hepatitis c virus | species | 4021 | 0 |
| brazil | | hepatitis c virus subtype 1a | no rank | 329 | 0 |
| brazil | | hepatitis c virus subtype 1b | no rank | 311 | 0 |
| brazil | | hepatitis c virus subtype 2a | no rank | 1 | 0 |
| brazil | | hepatitis c virus subtype 2b | no rank | 12 | 0 |
| brazil | | hepatitis c virus subtype 2c | no rank | 1 | 0 |
| brazil | | hepatitis c virus subtype 3a | no rank | 638 | 0 |
| brazil | | human pegivirus | no rank | 4 | 0 |
| brazil | | human pegivirus genotype 1 | no rank | 39 | 0 |
| brazil | | human pegivirus genotype 2 | no rank | 3 | 0 |
| brazil | | iguape virus | no rank | 13 | 0 |
| brazil | | ilheus virus | species | 16 | 3 |
| brazil | | jingmen tick virus | no rank | 24 | 0 |
| brazil | | mogiana tick virus | species | 26 | 0 |
| brazil | | mosquito flavivirus | no rank | 7 | 0 |
| brazil | | pegivirus d | species | 1 | 0 |
| brazil | | pegivirus e | species | 1 | 0 |
| brazil | | pestivirus a | species | 1 | 0 |
| brazil | | pestivirus b | species | 1 | 0 |
| brazil | | pestivirus h | species | 3 | 0 |
| brazil | | pestivirus hobi/brazil/200/2002 | no rank | 1 | 0 |
| brazil | | pestivirus hobi/brazil/315/2004 | no rank | 1 | 0 |
| brazil | | pestivirus sp. brz buf 9 | no rank | 1 | 0 |
| brazil | | pestivirus strain d32/00_hobi | no rank | 4 | 0 |
| brazil | | rocio virus | species | 6 | 0 |
| brazil | | sabethes flavivirus | species | 6 | 0 |
| brazil | | sigmodontinae hepacivirus | species | 1 | 0 |
| brazil | | st. louis encephalitis virus | species | 63 | 3 |
| brazil | | theiler's disease-associated virus | no rank | 7 | 0 |
| brazil | | west nile virus | species | 6 | 0 |
| brazil | | yellow fever virus | species | 322 | 8 |
| brazil | | zika virus | species | 171 | 7 |
| brazil | acre | dengue virus | species | 0 | 5 |
| brazil | acre | dengue virus 1 | no rank | 1 | 0 |
| brazil | acre | flavivirus | genus | 0 | 2 |
| brazil | acre | hepacivirus | genus | 0 | 2 |
| brazil | acre | hepatitis c virus | species | 0 | 5 |
| brazil | acre | yellow fever virus | species | 0 | 1 |
| brazil | alagoas | dengue virus | species | 0 | 2 |
| brazil | alagoas | dengue virus 1 | no rank | 7 | 0 |
| brazil | alagoas | zika virus | species | 11 | 0 |
| brazil | amapa | dengue virus | species | 0 | 2 |
| brazil | amapa | dengue virus 1 | no rank | 14 | 0 |
| brazil | amapa | flavivirus | genus | 0 | 1 |
| brazil | amazonas | bovine viral diarrhea virus 1 | species | 0 | 1 |
| brazil | amazonas | bussuquara virus | no rank | 0 | 1 |
| brazil | amazonas | dengue virus | species | 0 | 36 |
| brazil | amazonas | dengue virus 1 | no rank | 11 | 0 |
| brazil | amazonas | dengue virus 2 | no rank | 7 | 0 |
| brazil | amazonas | dengue virus 3 | no rank | 16 | 0 |
| brazil | amazonas | dengue virus 4 | no rank | 34 | 1 |
| brazil | amazonas | flavivirus | genus | 0 | 3 |
| brazil | amazonas | gb virus c | species | 0 | 1 |
| brazil | amazonas | hepacivirus | genus | 0 | 2 |
| brazil | amazonas | hepatitis c virus | species | 21 | 25 |
| brazil | amazonas | ilheus virus | species | 0 | 2 |
| brazil | amazonas | west nile virus | species | 0 | 1 |
| brazil | amazonas | yellow fever virus | species | 2 | 5 |
| brazil | amazonas | yellow fever virus group | subgenus | 0 | 1 |
| brazil | amazonas | zika virus | species | 63 | 0 |
| brazil | bahia | dengue virus | species | 0 | 17 |
| brazil | bahia | dengue virus 2 | no rank | 5 | 1 |
| brazil | bahia | dengue virus 4 | no rank | 1 | 2 |
| brazil | bahia | flavivirus | genus | 0 | 1 |
| brazil | bahia | gb virus c | species | 0 | 1 |
| brazil | bahia | hepacivirus | genus | 0 | 9 |
| brazil | bahia | hepatitis c virus | species | 0 | 16 |
| brazil | bahia | spondweni virus | species | 0 | 1 |
| brazil | bahia | west nile virus | species | 0 | 1 |
| brazil | bahia | yellow fever virus | species | 34 | 5 |
| brazil | bahia | zika virus | species | 3 | 10 |
| brazil | ceara | dengue virus | species | 0 | 7 |
| brazil | ceara | dengue virus 1 | no rank | 248 | 1 |
| brazil | ceara | dengue virus 2 | no rank | 0 | 2 |
| brazil | ceara | dengue virus 3 | no rank | 2 | 0 |
| brazil | ceara | dengue virus 4 | no rank | 1 | 0 |
| brazil | ceara | gb virus c | species | 0 | 1 |
| brazil | ceara | hepatitis c virus | species | 136 | 1 |
| brazil | ceara | japanese encephalitis virus | species | 0 | 1 |
| brazil | ceara | zika virus | species | 1 | 0 |
| brazil | espirito santo | dengue virus | species | 0 | 2 |
| brazil | espirito santo | dengue virus 1 | no rank | 23 | 0 |
| brazil | espirito santo | dengue virus 2 | no rank | 0 | 1 |
| brazil | espirito santo | hepatitis c virus | species | 0 | 2 |
| brazil | espirito santo | west nile virus | species | 1 | 0 |
| brazil | espirito santo | yellow fever virus | species | 66 | 0 |
| brazil | federal district | dengue virus | species | 0 | 3 |
| brazil | federal district | dengue virus 1 | no rank | 3 | 0 |
| brazil | federal district | dengue virus 2 | no rank | 1 | 0 |
| brazil | federal district | hepacivirus | genus | 0 | 4 |
| brazil | federal district | hepatitis c virus | species | 0 | 3 |
| brazil | federal district | yellow fever virus | species | 0 | 1 |
| brazil | goias | dengue virus | species | 0 | 5 |
| brazil | goias | dengue virus 1 | no rank | 15 | 0 |
| brazil | goias | dengue virus 2 | no rank | 1 | 0 |
| brazil | goias | dengue virus 4 | no rank | 5 | 0 |
| brazil | goias | flavivirus | genus | 0 | 1 |
| brazil | goias | gb virus c | species | 0 | 2 |
| brazil | goias | hepacivirus | genus | 0 | 5 |
| brazil | goias | hepatitis c virus | species | 0 | 8 |
| brazil | goias | ilheus virus | species | 0 | 1 |
| brazil | goias | west nile virus | species | 0 | 1 |
| brazil | goias | yellow fever virus | species | 3 | 3 |
| brazil | maranhao | dengue virus | species | 0 | 1 |
| brazil | maranhao | dengue virus 1 | no rank | 2 | 0 |
| brazil | maranhao | dengue virus 3 | no rank | 1 | 0 |
| brazil | maranhao | flavivirus | genus | 0 | 1 |
| brazil | maranhao | ilheus virus | species | 0 | 1 |
| brazil | maranhao | yellow fever virus | species | 0 | 2 |
| brazil | mato grosso | bovine viral diarrhea virus 3 | species | 1 | 0 |
| brazil | mato grosso | cacipacore virus | species | 0 | 1 |
| brazil | mato grosso | culex flavivirus | species | 15 | 0 |
| brazil | mato grosso | dengue virus | species | 0 | 16 |
| brazil | mato grosso | dengue virus 1 | no rank | 20 | 1 |
| brazil | mato grosso | dengue virus 2 | no rank | 5 | 0 |
| brazil | mato grosso | dengue virus 3 | no rank | 2 | 0 |
| brazil | mato grosso | dengue virus 4 | no rank | 62 | 3 |
| brazil | mato grosso | hepacivirus | genus | 0 | 8 |
| brazil | mato grosso | hepatitis c virus | species | 0 | 18 |
| brazil | mato grosso | ilheus virus | species | 3 | 0 |
| brazil | mato grosso | st. louis encephalitis virus | species | 8 | 0 |
| brazil | mato grosso | west nile virus | species | 0 | 3 |
| brazil | mato grosso | yellow fever virus | species | 4 | 6 |
| brazil | mato grosso | zika virus | species | 15 | 1 |
| brazil | mato grosso do sul | cacipacore virus | species | 0 | 1 |
| brazil | mato grosso do sul | dengue virus | species | 0 | 6 |
| brazil | mato grosso do sul | dengue virus 1 | no rank | 7 | 0 |
| brazil | mato grosso do sul | dengue virus 2 | no rank | 37 | 0 |
| brazil | mato grosso do sul | dengue virus 4 | no rank | 0 | 1 |
| brazil | mato grosso do sul | hepacivirus | genus | 0 | 9 |
| brazil | mato grosso do sul | hepatitis c virus | species | 0 | 18 |
| brazil | mato grosso do sul | ilheus virus | species | 1 | 0 |
| brazil | mato grosso do sul | nhumirim virus | species | 2 | 0 |
| brazil | mato grosso do sul | west nile virus | species | 0 | 1 |
| brazil | mato grosso do sul | yellow fever virus | species | 1 | 3 |
| brazil | minas gerais | bovine viral diarrhea virus 1 | species | 0 | 3 |
| brazil | minas gerais | dengue virus | species | 6 | 26 |
| brazil | minas gerais | dengue virus 1 | no rank | 13 | 3 |
| brazil | minas gerais | dengue virus 2 | no rank | 16 | 1 |
| brazil | minas gerais | dengue virus 3 | no rank | 29 | 0 |
| brazil | minas gerais | dengue virus 4 | no rank | 4 | 0 |
| brazil | minas gerais | hepacivirus | genus | 0 | 5 |
| brazil | minas gerais | hepatitis c virus | species | 49 | 10 |
| brazil | minas gerais | japanese encephalitis virus | species | 0 | 1 |
| brazil | minas gerais | mogiana tick virus | species | 3 | 0 |
| brazil | minas gerais | st. louis encephalitis virus | species | 1 | 1 |
| brazil | minas gerais | west nile virus | species | 1 | 2 |
| brazil | minas gerais | yellow fever virus | species | 163 | 7 |
| brazil | minas gerais | zika virus | species | 6 | 0 |
| brazil | para | bovine viral diarrhea virus 1 | species | 22 | 0 |
| brazil | para | dengue virus | species | 0 | 9 |
| brazil | para | dengue virus 1 | no rank | 7 | 0 |
| brazil | para | dengue virus 3 | no rank | 2 | 0 |
| brazil | para | dengue virus 4 | no rank | 4 | 0 |
| brazil | para | flavivirus | genus | 0 | 4 |
| brazil | para | gb virus c | species | 18 | 0 |
| brazil | para | hepacivirus | genus | 0 | 4 |
| brazil | para | hepatitis c virus | species | 208 | 8 |
| brazil | para | japanese encephalitis virus | species | 0 | 1 |
| brazil | para | st. louis encephalitis virus | species | 1 | 1 |
| brazil | para | west nile virus | species | 0 | 1 |
| brazil | para | yellow fever virus | species | 0 | 5 |
| brazil | para | zika virus | species | 0 | 2 |
| brazil | paraiba | bovine viral diarrhea virus 1 | species | 0 | 1 |
| brazil | paraiba | dengue virus | species | 0 | 4 |
| brazil | paraiba | dengue virus 1 | no rank | 39 | 0 |
| brazil | paraiba | west nile virus | species | 0 | 1 |
| brazil | paraiba | zika virus | species | 0 | 1 |
| brazil | parana | bovine viral diarrhea virus 1 | species | 0 | 1 |
| brazil | parana | dengue virus | species | 0 | 2 |
| brazil | parana | dengue virus 4 | no rank | 1 | 1 |
| brazil | parana | flavivirus | genus | 0 | 2 |
| brazil | parana | hepacivirus | genus | 0 | 3 |
| brazil | parana | hepatitis c virus | species | 25 | 8 |
| brazil | parana | ilheus virus | species | 0 | 1 |
| brazil | parana | yellow fever virus | species | 0 | 1 |
| brazil | pernambuco | dengue virus | species | 0 | 18 |
| brazil | pernambuco | dengue virus 1 | no rank | 52 | 1 |
| brazil | pernambuco | dengue virus 2 | no rank | 53 | 0 |
| brazil | pernambuco | dengue virus 3 | no rank | 38 | 0 |
| brazil | pernambuco | gb virus c | species | 0 | 1 |
| brazil | pernambuco | hepacivirus | genus | 0 | 4 |
| brazil | pernambuco | hepatitis c virus | species | 0 | 8 |
| brazil | pernambuco | japanese encephalitis virus | species | 0 | 1 |
| brazil | pernambuco | west nile virus | species | 0 | 1 |
| brazil | pernambuco | yellow fever virus | species | 0 | 1 |
| brazil | pernambuco | zika virus | species | 166 | 10 |
| brazil | piaui | dengue virus | species | 0 | 2 |
| brazil | piaui | dengue virus 1 | no rank | 12 | 0 |
| brazil | piaui | dengue virus 2 | no rank | 12 | 1 |
| brazil | piaui | dengue virus 3 | no rank | 9 | 0 |
| brazil | piaui | hepacivirus | genus | 0 | 1 |
| brazil | piaui | hepatitis c virus | species | 81 | 1 |
| brazil | piaui | west nile virus | species | 1 | 0 |
| brazil | rio de janeiro | dengue virus | species | 0 | 137 |
| brazil | rio de janeiro | dengue virus 1 | no rank | 41 | 9 |
| brazil | rio de janeiro | dengue virus 2 | no rank | 27 | 9 |
| brazil | rio de janeiro | dengue virus 3 | no rank | 0 | 6 |
| brazil | rio de janeiro | dengue virus 4 | no rank | 18 | 6 |
| brazil | rio de janeiro | gb virus c | species | 0 | 2 |
| brazil | rio de janeiro | hepacivirus | genus | 0 | 7 |
| brazil | rio de janeiro | hepatitis c virus | species | 283 | 24 |
| brazil | rio de janeiro | hepatitis c virus subtype 3a | no rank | 20 | 0 |
| brazil | rio de janeiro | west nile virus | species | 0 | 2 |
| brazil | rio de janeiro | yellow fever virus | species | 488 | 8 |
| brazil | rio de janeiro | yellow fever virus group | subgenus | 0 | 1 |
| brazil | rio de janeiro | zika virus | species | 46 | 26 |
| brazil | rio grande do norte | bovine viral diarrhea virus 2 | no rank | 0 | 1 |
| brazil | rio grande do norte | bovine viral diarrhea virus 3 | species | 0 | 1 |
| brazil | rio grande do norte | dengue virus | species | 0 | 6 |
| brazil | rio grande do norte | dengue virus 1 | no rank | 2 | 1 |
| brazil | rio grande do norte | dengue virus 2 | no rank | 0 | 1 |
| brazil | rio grande do norte | flavivirus | genus | 0 | 1 |
| brazil | rio grande do norte | yellow fever virus | species | 0 | 1 |
| brazil | rio grande do norte | zika virus | species | 3 | 1 |
| brazil | rio grande do sul | bovine viral diarrhea virus 1 | species | 0 | 1 |
| brazil | rio grande do sul | dengue virus | species | 0 | 2 |
| brazil | rio grande do sul | dengue virus 4 | no rank | 0 | 1 |
| brazil | rio grande do sul | gb virus c | species | 71 | 0 |
| brazil | rio grande do sul | hepacivirus | genus | 0 | 1 |
| brazil | rio grande do sul | hepatitis c virus | species | 1065 | 9 |
| brazil | rio grande do sul | hepatitis c virus subtype 1a | no rank | 4 | 0 |
| brazil | rio grande do sul | hepatitis c virus subtype 1b | no rank | 8 | 0 |
| brazil | rio grande do sul | hepatitis c virus subtype 2b | no rank | 6 | 0 |
| brazil | rio grande do sul | hepatitis c virus subtype 3a | no rank | 12 | 0 |
| brazil | rio grande do sul | pestivirus a | species | 28 | 0 |
| brazil | rio grande do sul | pestivirus b | species | 15 | 0 |
| brazil | rio grande do sul | west nile virus | species | 0 | 1 |
| brazil | rio grande do sul | yellow fever virus | species | 3 | 8 |
| brazil | rio grande do sul | yellow fever virus group | subgenus | 0 | 1 |
| brazil | rio grande do sul | zika virus | species | 0 | 1 |
| brazil | rondonia | dengue virus | species | 0 | 2 |
| brazil | rondonia | dengue virus 1 | no rank | 1 | 0 |
| brazil | rondonia | dengue virus 3 | no rank | 4 | 0 |
| brazil | rondonia | flavivirus | genus | 0 | 3 |
| brazil | rondonia | hepacivirus | genus | 0 | 2 |
| brazil | rondonia | hepatitis c virus | species | 22 | 2 |
| brazil | rondonia | ilheus virus | species | 0 | 1 |
| brazil | rondonia | yellow fever virus | species | 0 | 2 |
| brazil | roraima | dengue virus | species | 0 | 11 |
| brazil | roraima | dengue virus 1 | no rank | 17 | 0 |
| brazil | roraima | dengue virus 3 | no rank | 3 | 0 |
| brazil | roraima | dengue virus 4 | no rank | 9 | 1 |
| brazil | roraima | yellow fever virus | species | 0 | 2 |
| brazil | santa catarina | dengue virus | species | 0 | 2 |
| brazil | santa catarina | dengue virus 2 | no rank | 23 | 0 |
| brazil | santa catarina | hepacivirus | genus | 0 | 4 |
| brazil | santa catarina | hepatitis c virus | species | 0 | 14 |
| brazil | santa catarina | pestivirus a | species | 1 | 0 |
| brazil | santa catarina | zika virus | species | 0 | 1 |
| brazil | sao paulo | dengue virus | species | 0 | 25 |
| brazil | sao paulo | dengue virus 1 | no rank | 303 | 1 |
| brazil | sao paulo | dengue virus 2 | no rank | 140 | 2 |
| brazil | sao paulo | dengue virus 3 | no rank | 112 | 0 |
| brazil | sao paulo | dengue virus 4 | no rank | 0 | 1 |
| brazil | sao paulo | flavivirus | genus | 0 | 13 |
| brazil | sao paulo | gb virus c | species | 0 | 4 |
| brazil | sao paulo | hepacivirus | genus | 0 | 18 |
| brazil | sao paulo | hepatitis c virus | species | 30 | 37 |
| brazil | sao paulo | ilheus virus | species | 0 | 3 |
| brazil | sao paulo | japanese encephalitis virus | species | 0 | 4 |
| brazil | sao paulo | rocio virus | species | 4 | 6 |
| brazil | sao paulo | st. louis encephalitis virus | species | 1 | 4 |
| brazil | sao paulo | west nile virus | species | 1 | 1 |
| brazil | sao paulo | yellow fever virus | species | 377 | 10 |
| brazil | sao paulo | zika virus | species | 16 | 0 |
| brazil | sergipe | dengue virus | species | 0 | 5 |
| brazil | sergipe | dengue virus 1 | no rank | 2 | 0 |
| brazil | sergipe | hepacivirus | genus | 0 | 1 |
| brazil | sergipe | hepatitis c virus | species | 0 | 2 |
| brazil | tocantins | dengue virus | species | 0 | 3 |
| brazil | tocantins | dengue virus 1 | no rank | 1 | 0 |
| brazil | tocantins | hepacivirus | genus | 0 | 1 |
| brazil | tocantins | hepatitis c virus | species | 0 | 1 |
| brazil | tocantins | yellow fever virus | species | 0 | 3 |
| brazil | tocantins | zika virus | species | 8 | 0 |
| british virgin islands | | dengue virus 1 | no rank | 1 | 0 |
| british virgin islands | | dengue virus 2 | no rank | 4 | 0 |
| british virgin islands | | dengue virus 3 | no rank | 2 | 0 |
| british virgin islands | | west nile virus | species | 1 | 0 |
| brunei | | dengue virus | species | 1 | 0 |
| brunei | | dengue virus 1 | no rank | 3 | 0 |
| brunei | | dengue virus 2 | no rank | 14 | 0 |
| brunei | | dengue virus 3 | no rank | 1 | 0 |
| brunei | | dengue virus 4 | no rank | 1 | 0 |
| bulgaria | | bovine hepacivirus | species | 19 | 0 |
| bulgaria | | classical swine fever virus | species | 1 | 0 |
| bulgaria | | equine hepacivirus | species | 2 | 0 |
| bulgaria | | west nile virus | species | 12 | 0 |
| bulgaria | pleven province | hepatitis c virus | species | 0 | 1 |
| bulgaria | plovdiv province | hepatitis c virus | species | 0 | 1 |
| bulgaria | sofia city | classical swine fever virus | species | 32 | 0 |
| bulgaria | sofia city | hepatitis c virus | species | 0 | 3 |
| bulgaria | sofia city | tick-borne encephalitis virus | species | 0 | 1 |
| bulgaria | sofia city | west nile virus | species | 0 | 1 |
| bulgaria | sofia province | hepatitis c virus | species | 0 | 1 |
| bulgaria | sofia province | tick-borne encephalitis virus | species | 0 | 1 |
| bulgaria | sofia province | west nile virus | species | 0 | 1 |
| bulgaria | stara zagora province | hepacivirus | genus | 0 | 1 |
| bulgaria | stara zagora province | hepatitis c virus | species | 0 | 2 |
| bulgaria | varna province | hepatitis c virus | species | 0 | 1 |
| burkina faso | | dengue virus 1 | no rank | 1 | 0 |
| burkina faso | | dengue virus 2 | no rank | 14 | 0 |
| burkina faso | | hepatitis c virus | species | 2 | 0 |
| burkina faso | | human pegivirus | no rank | 1 | 0 |
| burkina faso | | yellow fever virus | species | 4 | 0 |
| burkina faso | | zika virus | species | 3 | 0 |
| burkina faso | centre region | dengue virus | species | 0 | 2 |
| burkina faso | centre region | dengue virus 1 | no rank | 5 | 0 |
| burkina faso | centre region | dengue virus 2 | no rank | 16 | 1 |
| burkina faso | centre region | dengue virus 3 | no rank | 65 | 0 |
| burkina faso | centre region | flavivirus | genus | 0 | 1 |
| burkina faso | centre region | hepatitis c virus | species | 0 | 9 |
| burkina faso | centre region | yellow fever virus | species | 0 | 1 |
| burkina faso | centre-ouest region | hepatitis c virus | species | 0 | 1 |
| burkina faso | high-basins region | dengue virus | species | 0 | 1 |
| burkina faso | high-basins region | dengue virus 2 | no rank | 0 | 1 |
| burkina faso | high-basins region | hepacivirus | genus | 0 | 1 |
| burkina faso | high-basins region | hepatitis c virus | species | 0 | 1 |
| burkina faso | high-basins region | yellow fever virus | species | 0 | 2 |
| burundi | | hepatitis c virus | species | 8 | 0 |
| burundi | | hepatitis c virus subtype 4k | no rank | 1 | 0 |
| burundi | | human pegivirus | no rank | 5 | 0 |
| burundi | bujumbura mairie province | hepatitis c virus | species | 0 | 3 |
| burundi | bujumbura rural province | hepatitis c virus | species | 0 | 3 |
| cambodia | | dengue virus | species | 4 | 2 |
| cambodia | | dengue virus 1 | no rank | 180 | 0 |
| cambodia | | dengue virus 2 | no rank | 116 | 0 |
| cambodia | | dengue virus 3 | no rank | 73 | 0 |
| cambodia | | dengue virus 4 | no rank | 30 | 0 |
| cambodia | | hepacivirus sp. | species | 11 | 0 |
| cambodia | | hepatitis c virus | species | 3446 | 0 |
| cambodia | | hepatitis c virus subtype 1b | no rank | 4 | 0 |
| cambodia | | hepatitis c virus subtype 6e | no rank | 2 | 0 |
| cambodia | | hepatitis c virus subtype 6r | no rank | 2 | 0 |
| cambodia | | japanese encephalitis virus | species | 12 | 3 |
| cambodia | | jingmen tick virus | no rank | 4 | 0 |
| cambodia | | pegivirus sp. | species | 3 | 0 |
| cambodia | | phnom penh bat virus | species | 3 | 0 |
| cambodia | | tembusu virus | species | 4 | 0 |
| cambodia | | zika virus | species | 10 | 0 |
| cambodia | banteay meanchey province | dengue virus 1 | no rank | 1 | 0 |
| cambodia | banteay meanchey province | dengue virus 3 | no rank | 2 | 0 |
| cambodia | battambang province | dengue virus 1 | no rank | 6 | 0 |
| cambodia | battambang province | dengue virus 2 | no rank | 5 | 0 |
| cambodia | battambang province | dengue virus 3 | no rank | 87 | 0 |
| cambodia | kampong cham province | cell fusing agent virus | species | 3 | 0 |
| cambodia | kampong cham province | dengue virus | species | 0 | 3 |
| cambodia | kampong cham province | dengue virus 1 | no rank | 3 | 0 |
| cambodia | kampong cham province | dengue virus 2 | no rank | 1 | 0 |
| cambodia | kampong cham province | japanese encephalitis virus | species | 0 | 1 |
| cambodia | kampong speu province | dengue virus 1 | no rank | 1 | 0 |
| cambodia | kandal province | dengue virus | species | 0 | 4 |
| cambodia | kandal province | dengue virus 2 | no rank | 0 | 1 |
| cambodia | kandal province | hepatitis c virus | species | 0 | 2 |
| cambodia | kandal province | japanese encephalitis virus | species | 0 | 1 |
| cambodia | kandal province | phnom penh bat virus | species | 0 | 1 |
| cambodia | mondulkiri province | dengue virus 1 | no rank | 92 | 0 |
| cambodia | phnom penh municipality | cell fusing agent virus | species | 1 | 0 |
| cambodia | phnom penh municipality | dengue virus | species | 0 | 9 |
| cambodia | phnom penh municipality | dengue virus 1 | no rank | 4 | 0 |
| cambodia | phnom penh municipality | dengue virus 2 | no rank | 0 | 1 |
| cambodia | phnom penh municipality | hepatitis c virus | species | 0 | 5 |
| cambodia | phnom penh municipality | japanese encephalitis virus | species | 0 | 3 |
| cambodia | phnom penh municipality | phnom penh bat virus | species | 0 | 1 |
| cambodia | prey veng province | dengue virus 1 | no rank | 1 | 0 |
| cambodia | siem reap province | dengue virus | species | 0 | 1 |
| cambodia | siem reap province | japanese encephalitis virus | species | 0 | 1 |
| cambodia | takeo province | dengue virus | species | 0 | 1 |
| cambodia | takeo province | dengue virus 1 | no rank | 1 | 0 |
| cambodia | takeo province | flavivirus | genus | 0 | 1 |
| cambodia | takeo province | hepatitis c virus | species | 0 | 2 |
| cambodia | takeo province | japanese encephalitis virus | species | 0 | 1 |
| cameroon | | bat pegivirus | no rank | 7 | 0 |
| cameroon | | dengue virus | species | 5 | 0 |
| cameroon | | dengue virus 1 | no rank | 3 | 0 |
| cameroon | | dengue virus 2 | no rank | 1 | 0 |
| cameroon | | dengue virus 3 | no rank | 1 | 0 |
| cameroon | | gb virus c | species | 8 | 0 |
| cameroon | | hepatitis c virus | species | 1067 | 0 |
| cameroon | | hepatitis c virus genotype 4 | no rank | 2 | 0 |
| cameroon | | hepatitis c virus subtype 4f | no rank | 2 | 0 |
| cameroon | | human pegivirus | no rank | 15 | 0 |
| cameroon | | human pegivirus 2 | species | 2 | 0 |
| cameroon | | yaounde virus | species | 3 | 0 |
| cameroon | | yellow fever virus | species | 1 | 0 |
| cameroon | centre region | dengue virus | species | 0 | 1 |
| cameroon | centre region | hepacivirus | genus | 0 | 5 |
| cameroon | centre region | hepatitis c virus | species | 0 | 8 |
| cameroon | east region | dengue virus | species | 0 | 2 |
| cameroon | east region | hepatitis c virus | species | 0 | 2 |
| cameroon | east region | yellow fever virus | species | 0 | 1 |
| cameroon | littoral region | dengue virus | species | 0 | 1 |
| cameroon | littoral region | dengue virus 1 | no rank | 1 | 0 |
| cameroon | littoral region | dengue virus 2 | no rank | 3 | 0 |
| cameroon | littoral region | dengue virus 3 | no rank | 5 | 0 |
| cameroon | littoral region | hepatitis c virus | species | 0 | 1 |
| cameroon | north region | classical swine fever virus | species | 0 | 1 |
| cameroon | north region | dengue virus | species | 0 | 3 |
| cameroon | north region | yellow fever virus | species | 0 | 2 |
| cameroon | south region | classical swine fever virus | species | 0 | 2 |
| cameroon | south region | dengue virus | species | 0 | 1 |
| cameroon | south region | hepacivirus | genus | 0 | 1 |
| cameroon | south region | hepatitis c virus | species | 0 | 6 |
| cameroon | south region | yellow fever virus | species | 0 | 1 |
| cameroon | south-west region | hepacivirus | genus | 0 | 1 |
| cameroon | south-west region | hepatitis c virus | species | 0 | 2 |
| cameroon | west region | classical swine fever virus | species | 0 | 1 |
| cameroon | west region | dengue virus | species | 0 | 3 |
| cameroon | west region | hepacivirus | genus | 0 | 1 |
| cameroon | west region | hepatitis c virus | species | 0 | 5 |
| cameroon | west region | yellow fever virus | species | 0 | 1 |
| canada | | bovine viral diarrhea virus 1 | species | 1395 | 0 |
| canada | | bovine viral diarrhea virus 2 | no rank | 4 | 0 |
| canada | | bovine viral diarrhea virus 3 | species | 1 | 0 |
| canada | | bovine viral diarrhea virus type 1b | no rank | 1 | 0 |
| canada | | gb virus c | species | 29 | 0 |
| canada | | hepatitis c virus | species | 14904 | 0 |
| canada | | hepatitis c virus qc69 | no rank | 1 | 0 |
| canada | | hepatitis c virus subtype 1a | no rank | 1 | 0 |
| canada | | hepatitis c virus subtype 2m | no rank | 3 | 0 |
| canada | | hepatitis c virus subtype 3i | no rank | 1 | 0 |
| canada | | hepatitis c virus subtype 6o | no rank | 1 | 0 |
| canada | | hepatitis c virus subtype 6p | no rank | 1 | 0 |
| canada | | hepatitis c virus subtype 6q | no rank | 1 | 0 |
| canada | | human pegivirus | no rank | 3 | 0 |
| canada | | murray valley encephalitis virus | species | 1 | 0 |
| canada | | powassan virus | species | 2 | 8 |
| canada | | west nile virus | species | 26 | 0 |
| canada | | zika virus | species | 6 | 0 |
| canada | alberta | aedes flavivirus | species | 0 | 1 |
| canada | alberta | apoi virus | species | 0 | 1 |
| canada | alberta | bovine viral diarrhea virus 1 | species | 215 | 8 |
| canada | alberta | bovine viral diarrhea virus 2 | no rank | 34 | 0 |
| canada | alberta | calbertado virus | species | 6 | 1 |
| canada | alberta | dengue virus | species | 0 | 1 |
| canada | alberta | dengue virus 3 | no rank | 0 | 1 |
| canada | alberta | flavivirus | genus | 0 | 3 |
| canada | alberta | hepacivirus | genus | 0 | 6 |
| canada | alberta | hepatitis c virus | species | 0 | 20 |
| canada | alberta | japanese encephalitis virus | species | 0 | 2 |
| canada | alberta | kamiti river virus | species | 0 | 1 |
| canada | alberta | modoc virus | species | 0 | 1 |
| canada | alberta | mosquito flavivirus | no rank | 0 | 1 |
| canada | alberta | nakiwogo virus | species | 0 | 1 |
| canada | alberta | nounane virus | species | 0 | 1 |
| canada | alberta | powassan virus | species | 0 | 1 |
| canada | alberta | quang binh virus | species | 0 | 1 |
| canada | alberta | rio bravo virus | species | 0 | 1 |
| canada | alberta | st. louis encephalitis virus | species | 0 | 1 |
| canada | alberta | west nile virus | species | 3 | 14 |
| canada | british columbia | bovine viral diarrhea virus 1 | species | 44 | 1 |
| canada | british columbia | calbertado virus | species | 86 | 0 |
| canada | british columbia | dengue virus | species | 0 | 1 |
| canada | british columbia | hepacivirus | genus | 0 | 10 |
| canada | british columbia | hepatitis c virus | species | 0 | 73 |
| canada | british columbia | japanese encephalitis virus | species | 0 | 1 |
| canada | british columbia | powassan virus | species | 0 | 1 |
| canada | british columbia | st. louis encephalitis virus | species | 0 | 1 |
| canada | british columbia | west nile virus | species | 0 | 9 |
| canada | manitoba | bovine viral diarrhea virus 1 | species | 2 | 2 |
| canada | manitoba | bovine viral diarrhea virus 2 | no rank | 15 | 0 |
| canada | manitoba | calbertado virus | species | 6 | 0 |
| canada | manitoba | deer tick virus | no rank | 6 | 0 |
| canada | manitoba | hepacivirus | genus | 0 | 1 |
| canada | manitoba | hepatitis c virus | species | 0 | 7 |
| canada | manitoba | japanese encephalitis virus | species | 0 | 2 |
| canada | manitoba | west nile virus | species | 1 | 6 |
| canada | new brunswick | bovine viral diarrhea virus 1 | species | 0 | 1 |
| canada | new brunswick | deer tick virus | no rank | 1 | 0 |
| canada | new brunswick | hepatitis c virus | species | 0 | 2 |
| canada | new brunswick | west nile virus | species | 0 | 2 |
| canada | newfoundland and labrador | hepatitis c virus | species | 0 | 2 |
| canada | newfoundland and labrador | tick-borne encephalitis virus | species | 0 | 1 |
| canada | newfoundland and labrador | west nile virus | species | 0 | 1 |
| canada | nova scotia | bovine viral diarrhea virus 1 | species | 0 | 1 |
| canada | nova scotia | deer tick virus | no rank | 1 | 0 |
| canada | nova scotia | hepatitis c virus | species | 0 | 1 |
| canada | nova scotia | west nile virus | species | 0 | 1 |
| canada | nunavut | hepatitis c virus | species | 0 | 1 |
| canada | ontario | bovine viral diarrhea virus 1 | species | 128 | 8 |
| canada | ontario | bovine viral diarrhea virus 2 | no rank | 85 | 1 |
| canada | ontario | deer tick virus | no rank | 2 | 0 |
| canada | ontario | dengue virus | species | 0 | 1 |
| canada | ontario | flavivirus | genus | 0 | 2 |
| canada | ontario | hepacivirus | genus | 0 | 6 |
| canada | ontario | hepatitis c virus | species | 339 | 39 |
| canada | ontario | japanese encephalitis virus | species | 0 | 5 |
| canada | ontario | kunjin virus | no rank | 0 | 1 |
| canada | ontario | murray valley encephalitis virus | species | 0 | 1 |
| canada | ontario | pestivirus | genus | 0 | 1 |
| canada | ontario | powassan virus | species | 2 | 8 |
| canada | ontario | st. louis encephalitis virus | species | 0 | 5 |
| canada | ontario | west nile virus | species | 0 | 30 |
| canada | prince edward island | bovine viral diarrhea virus 1 | species | 0 | 1 |
| canada | prince edward island | hepatitis c virus | species | 0 | 3 |
| canada | prince edward island | west nile virus | species | 0 | 1 |
| canada | quebec | bovine viral diarrhea virus 1 | species | 55 | 10 |
| canada | quebec | bovine viral diarrhea virus 2 | no rank | 26 | 2 |
| canada | quebec | flavivirus | genus | 0 | 1 |
| canada | quebec | hepacivirus | genus | 0 | 8 |
| canada | quebec | hepatitis c virus | species | 11 | 28 |
| canada | quebec | japanese encephalitis virus | species | 0 | 1 |
| canada | quebec | pestivirus | genus | 0 | 2 |
| canada | quebec | powassan virus | species | 1 | 0 |
| canada | quebec | west nile virus | species | 0 | 14 |
| canada | saskatchewan | bovine viral diarrhea virus 1 | species | 170 | 8 |
| canada | saskatchewan | bovine viral diarrhea virus 2 | no rank | 48 | 0 |
| canada | saskatchewan | calbertado virus | species | 5 | 0 |
| canada | saskatchewan | flavivirus | genus | 0 | 1 |
| canada | saskatchewan | hepacivirus | genus | 0 | 1 |
| canada | saskatchewan | hepatitis c virus | species | 0 | 5 |
| canada | saskatchewan | japanese encephalitis virus | species | 0 | 1 |
| canada | saskatchewan | st. louis encephalitis virus | species | 0 | 1 |
| canada | saskatchewan | west nile virus | species | 8 | 19 |
| canada | yukon | hepatitis c virus | species | 0 | 1 |
| canada | yukon | st. louis encephalitis virus | species | 0 | 1 |
| cape verde | | dengue virus | species | 0 | 1 |
| cape verde | | dengue virus 2 | no rank | 3 | 0 |
| cape verde | | dengue virus 3 | no rank | 2 | 0 |
| cape verde | | dengue virus 4 | no rank | 2 | 0 |
| cape verde | | pegivirus c | species | 18 | 0 |
| cape verde | brava municipality | zika virus | species | 2 | 0 |
| central african republic | | bagaza virus | species | 3 | 0 |
| central african republic | | bouboui virus | species | 3 | 0 |
| central african republic | | hepatitis c virus | species | 75 | 0 |
| central african republic | | usutu virus | species | 2 | 0 |
| central african republic | | west nile virus | species | 2 | 0 |
| central african republic | | yellow fever virus | species | 9 | 1 |
| central african republic | | zika virus | species | 4 | 0 |
| central african republic | bangui | flavivirus | genus | 0 | 1 |
| central african republic | bangui | hepatitis c virus | species | 0 | 2 |
| central african republic | bangui | west nile virus | species | 0 | 1 |
| central african republic | bangui | yellow fever virus | species | 0 | 2 |
| central african republic | bangui | zika virus | species | 1 | 1 |
| central african republic | basse-kotto | yellow fever virus | species | 0 | 1 |
| central african republic | haute-kotto | yellow fever virus | species | 0 | 1 |
| central african republic | lobaye | flavivirus | genus | 0 | 1 |
| central african republic | mambere-kadei | yellow fever virus | species | 0 | 1 |
| central african republic | mbomou | yellow fever virus | species | 0 | 1 |
| central african republic | nana-mambere | yellow fever virus | species | 0 | 1 |
| central african republic | ombella-mpoko | yellow fever virus | species | 0 | 1 |
| central african republic | ouham | yellow fever virus | species | 0 | 1 |
| central african republic | ouham-pende | yellow fever virus | species | 0 | 1 |
| central african republic | sangha-mbaere | hepacivirus | genus | 0 | 1 |
| central african republic | sangha-mbaere | hepatitis c virus | species | 0 | 2 |
| chad | n'djamena city | hepatitis c virus | species | 0 | 2 |
| chile | | bovine viral diarrhea virus 1 | species | 100 | 0 |
| chile | | bovine viral diarrhea virus 2 | no rank | 4 | 0 |
| chile | | dengue virus | species | 1 | 0 |
| chile | | dengue virus 1 | no rank | 2 | 0 |
| chile | | hepatitis c virus | species | 97 | 0 |
| chile | araucania region | hepatitis c virus | species | 0 | 1 |
| chile | los lagos region | hepatitis c virus | species | 0 | 1 |
| chile | los rios region | hepatitis c virus | species | 3 | 1 |
| chile | santiago metropolitan region | hepacivirus | genus | 0 | 1 |
| chile | santiago metropolitan region | hepatitis c virus | species | 81 | 2 |
| chile | santiago metropolitan region | west nile virus | species | 0 | 1 |
| chile | valparaiso region | dengue virus | species | 1 | 0 |
| chile | valparaiso region | dengue virus 1 | no rank | 5 | 0 |
| chile | valparaiso region | dengue virus 4 | no rank | 4 | 0 |
| chile | valparaiso region | zika virus | species | 65 | 0 |
| china | | aedes flavivirus | species | 1 | 0 |
| china | | alongshan virus | species | 1 | 0 |
| china | | atypical porcine pestivirus | no rank | 197 | 0 |
| china | | atypical porcine pestivirus 1 | species | 15 | 0 |
| china | | baiyangdian virus | no rank | 1 | 0 |
| china | | bat pestivirus btsk-pestv-1/gx2017 | species | 1 | 0 |
| china | | bat pestivirus btsk-pestv-2/gx2017 | species | 1 | 0 |
| china | | bat pestivirus btsk-pestv-3/gx2017 | species | 1 | 0 |
| china | | bat pestivirus btsk-pestv-4/gx2017 | species | 1 | 0 |
| china | | border disease virus | species | 10 | 0 |
| china | | bovine hepacivirus | species | 59 | 0 |
| china | | bovine viral diarrhea virus 1 | species | 895 | 0 |
| china | | bovine viral diarrhea virus 1a | no rank | 1 | 0 |
| china | | bovine viral diarrhea virus 1d | no rank | 2 | 0 |
| china | | bovine viral diarrhea virus 1m | no rank | 1 | 0 |
| china | | bovine viral diarrhea virus 2 | no rank | 20 | 0 |
| china | | bovine viral diarrhea virus 3 | species | 27 | 0 |
| china | | bovine viral diarrhea virus type 1b | no rank | 4 | 0 |
| china | | cell fusing agent virus | species | 1 | 0 |
| china | | chaoyang virus | species | 4 | 2 |
| china | | chinese broad-headed pond turtle hepacivirus | species | 1 | 0 |
| china | | chinese softshell turtle hepacivirus | species | 1 | 0 |
| china | | classical swine fever virus | species | 759 | 0 |
| china | | culex flavivirus | species | 32 | 0 |
| china | | dengue virus | species | 426 | 17 |
| china | | dengue virus 1 | no rank | 1706 | 1 |
| china | | dengue virus 2 | no rank | 772 | 0 |
| china | | dengue virus 3 | no rank | 230 | 1 |
| china | | dengue virus 4 | no rank | 49 | 0 |
| china | | donggang virus | species | 8 | 0 |
| china | | dongyang pangolin virus | species | 2 | 0 |
| china | | duck egg-drop syndrome virus | no rank | 8 | 0 |
| china | | duck flavivirus anhui/2010 | species | 1 | 0 |
| china | | duck flavivirus lg/01/11 | species | 1 | 0 |
| china | | duck flavivirus strain yy5 | species | 3 | 0 |
| china | | duck flavivirus ta | no rank | 1 | 0 |
| china | | duck hemorrhagic ovaritis virus | species | 2 | 0 |
| china | | duck hepacivirus | species | 4 | 0 |
| china | | duck tembusu virus | no rank | 27 | 0 |
| china | | equine hepacivirus | species | 51 | 0 |
| china | | equine pegivirus | no rank | 23 | 0 |
| china | | flaviviridae sp. | species | 7 | 0 |
| china | | flavivirus abbeylake | species | 2 | 0 |
| china | | flavivirus cjd05/chn/2010 | species | 2 | 0 |
| china | | flavivirus duck/sd/chn/2010 | species | 1 | 0 |
| china | | flavivirus muscovy/sd/china/2011 | no rank | 1 | 0 |
| china | | flavivirus muscovy/wr/china/2010 | no rank | 1 | 0 |
| china | | flavivirus strain cjd05 | species | 1 | 0 |
| china | | flavivirus white kaiya duck/wr/china/2010 | no rank | 1 | 0 |
| china | | gb virus c | species | 438 | 0 |
| china | | goat hepacivirus | species | 1 | 0 |
| china | | guangxi chinese leopard gecko hepacivirus | species | 1 | 0 |
| china | | guangxi houndshark hepacivirus | species | 2 | 0 |
| china | | hainan oriental leaf-toed gecko hepacivirus | species | 1 | 0 |
| china | | hcv/gbv-b chimeric virus | species | 1 | 0 |
| china | | hepacivirus n | species | 4 | 0 |
| china | | hepacivirus p | species | 2 | 0 |
| china | | hepacivirus sp. | species | 64 | 0 |
| china | | hepatitis c virus | species | 15436 | 0 |
| china | | hepatitis c virus genotype 6 | no rank | 2 | 0 |
| china | | hepatitis c virus subtype 1a | no rank | 12 | 0 |
| china | | hepatitis c virus subtype 1b | no rank | 758 | 0 |
| china | | hepatitis c virus subtype 1c | no rank | 3 | 0 |
| china | | hepatitis c virus subtype 2a | no rank | 129 | 0 |
| china | | hepatitis c virus subtype 2b | no rank | 3 | 0 |
| china | | hepatitis c virus subtype 2f | no rank | 4 | 0 |
| china | | hepatitis c virus subtype 2i | no rank | 2 | 0 |
| china | | hepatitis c virus subtype 3a | no rank | 79 | 0 |
| china | | hepatitis c virus subtype 3b | no rank | 109 | 0 |
| china | | hepatitis c virus subtype 4d | no rank | 3 | 0 |
| china | | hepatitis c virus subtype 5a | no rank | 3 | 0 |
| china | | hepatitis c virus subtype 6a | no rank | 334 | 0 |
| china | | hepatitis c virus subtype 6e | no rank | 6 | 0 |
| china | | hepatitis c virus subtype 6k | no rank | 6 | 0 |
| china | | hepatitis c virus subtype 6n | no rank | 22 | 0 |
| china | | hepatitis c virus subtype 6u | no rank | 2 | 0 |
| china | | hepatitis c virus subtype 6v | no rank | 2 | 0 |
| china | | human hepegivirus | no rank | 30 | 0 |
| china | | human pegivirus | no rank | 280 | 0 |
| china | | japanese encephalitis virus | species | 721 | 32 |
| china | | jingmen rhinolophus sinicus hepacivirus 1 | species | 1 | 0 |
| china | | jingmen tick virus | no rank | 373 | 0 |
| china | | karshi virus | no rank | 10 | 0 |
| china | | kyasanur forest disease virus | species | 2 | 2 |
| china | | layer flavivirus cjd05 | no rank | 1 | 0 |
| china | | longquan niviventer fulvescens hepacivirus 1 | species | 1 | 0 |
| china | | longquan niviventer fulvescens pegivirus 1 | species | 1 | 0 |
| china | | longquan niviventer niviventer hepacivirus 1 | species | 1 | 0 |
| china | | longquan niviventer niviventer pegivirus 1 | species | 1 | 0 |
| china | | longquan rhinolophus pearsonii pegivirus 1 | species | 1 | 0 |
| china | | longquan rhinolophus sinicus hepacivirus 1 | species | 1 | 0 |
| china | | longquan rhinolophus sinicus pegivirus 1 | species | 1 | 0 |
| china | | mogiana tick virus | species | 4 | 0 |
| china | | mosquito flavivirus | no rank | 13 | 0 |
| china | | nanhai dogfish shark hepacivirus | species | 1 | 0 |
| china | | nanhai dogfish shark pesti-like virus | species | 1 | 0 |
| china | | nanhai ghost shark hepacivirus 1 | species | 1 | 0 |
| china | | nanhai ghost shark hepacivirus 2 | species | 1 | 0 |
| china | | pegivirus k | species | 5 | 0 |
| china | | pegivirus sp. | species | 5 | 0 |
| china | | pestivirus sp. | species | 7 | 0 |
| china | | porcine pegivirus | species | 29 | 0 |
| china | | porcine pestivirus 1 | species | 1 | 0 |
| china | | quang binh virus | species | 4 | 0 |
| china | | rhinolophus affinis pestivirus 1 | species | 1 | 0 |
| china | | rhipicephalus associated flavi-like virus | species | 4 | 0 |
| china | | rodent hepacivirus | species | 7 | 0 |
| china | | rodent hepacvirus | species | 5 | 0 |
| china | | rodent pegivirus | species | 7 | 0 |
| china | | rodent pestivirus | species | 5 | 0 |
| china | | tembusu virus | species | 166 | 0 |
| china | | theiler's disease-associated virus | no rank | 12 | 0 |
| china | | tick-borne encephalitis virus | species | 26 | 0 |
| china | | wenling moray eel hepacivirus | species | 1 | 0 |
| china | | wenling pesti-like virus 2 | species | 1 | 0 |
| china | | wenling shark virus | species | 2 | 0 |
| china | | wenzhou apodemus agrarius hepacivirus 1 | species | 1 | 0 |
| china | | wenzhou pesti-like virus 1 | species | 1 | 0 |
| china | | wenzhou rattus norvegicus pegivirus 1 | species | 1 | 0 |
| china | | wenzhou rattus tanezumi pegivirus 1 | species | 1 | 0 |
| china | | wenzhou shark flavivirus | species | 2 | 0 |
| china | | wenzhou suncus murinus hepacivirus 1 | species | 1 | 0 |
| china | | west nile virus | species | 97 | 17 |
| china | | wufeng niviventer fulvescens hepacivirus 1 | species | 1 | 0 |
| china | | wufeng niviventer fulvescens pegivirus 1 | species | 1 | 0 |
| china | | wufeng niviventer niviventer hepacivirus 1 | species | 1 | 0 |
| china | | wufeng niviventer niviventer pegivirus 1 | species | 1 | 0 |
| china | | wufeng rhinolophus sinicus hepacivirus 1 | species | 1 | 0 |
| china | | xiamen fanray pesti-like virus | species | 1 | 0 |
| china | | xiamen guitarfish hepacivirus | species | 1 | 0 |
| china | | xiamen sepia stingray hepacivirus | species | 1 | 0 |
| china | | xishuangbanna aedes flavivirus | species | 2 | 0 |
| china | | yellow fever virus | species | 23 | 0 |
| china | | yellow fever virus 17d/tiantan | no rank | 1 | 0 |
| china | | yili teratoscincus roborowskii hepacivirus | species | 1 | 0 |
| china | | zika virus | species | 39 | 1 |
| china | anhui | border disease virus | species | 0 | 1 |
| china | anhui | classical swine fever virus | species | 1 | 0 |
| china | anhui | dengue virus | species | 0 | 1 |
| china | anhui | dengue virus 1 | no rank | 6 | 0 |
| china | anhui | dengue virus 2 | no rank | 1 | 0 |
| china | anhui | gb virus c | species | 0 | 1 |
| china | anhui | hepacivirus | genus | 0 | 4 |
| china | anhui | hepatitis c virus | species | 1 | 5 |
| china | anhui | japanese encephalitis virus | species | 0 | 1 |
| china | anhui | jingmen tick virus | no rank | 1 | 0 |
| china | beijing | bovine viral diarrhea virus 1 | species | 0 | 2 |
| china | beijing | bovine viral diarrhea virus 2 | no rank | 0 | 1 |
| china | beijing | classical swine fever virus | species | 1 | 0 |
| china | beijing | dengue virus | species | 0 | 1 |
| china | beijing | flavivirus | genus | 0 | 1 |
| china | beijing | gb virus c | species | 9 | 5 |
| china | beijing | hepacivirus | genus | 0 | 11 |
| china | beijing | hepatitis c virus | species | 1 | 38 |
| china | beijing | japanese encephalitis virus | species | 0 | 6 |
| china | beijing | tembusu virus | species | 0 | 1 |
| china | chinandega department | dengue virus 3 | no rank | 1 | 0 |
| china | chongqing | culex flavivirus | species | 0 | 1 |
| china | chongqing | hepacivirus | genus | 0 | 4 |
| china | chongqing | hepatitis c virus | species | 0 | 3 |
| china | chongqing | japanese encephalitis virus | species | 0 | 1 |
| china | chongqing | tembusu virus | species | 0 | 1 |
| china | fujian | bagaza virus | species | 0 | 1 |
| china | fujian | classical swine fever virus | species | 3 | 0 |
| china | fujian | culex flavivirus | species | 0 | 1 |
| china | fujian | dengue virus | species | 0 | 9 |
| china | fujian | dengue virus 1 | no rank | 1 | 2 |
| china | fujian | dengue virus 2 | no rank | 3 | 1 |
| china | fujian | duck tembusu virus | no rank | 0 | 1 |
| china | fujian | flavivirus | genus | 0 | 1 |
| china | fujian | hepacivirus | genus | 0 | 1 |
| china | fujian | hepatitis c virus | species | 0 | 4 |
| china | fujian | japanese encephalitis virus | species | 0 | 2 |
| china | fujian | jingmen tick virus | no rank | 6 | 0 |
| china | fujian | tembusu virus | species | 0 | 2 |
| china | gansu | bovine viral diarrhea virus 1 | species | 0 | 1 |
| china | gansu | gb virus c | species | 0 | 1 |
| china | gansu | hepacivirus | genus | 0 | 2 |
| china | gansu | hepatitis c virus | species | 1 | 5 |
| china | gansu | hepatitis c virus subtype 2a | no rank | 2 | 0 |
| china | gansu | japanese encephalitis virus | species | 1 | 5 |
| china | guangdong | atypical porcine pestivirus | no rank | 0 | 1 |
| china | guangdong | atypical porcine pestivirus 1 | species | 4 | 0 |
| china | guangdong | classical swine fever virus | species | 72 | 5 |
| china | guangdong | dengue virus | species | 45 | 64 |
| china | guangdong | dengue virus 1 | no rank | 321 | 7 |
| china | guangdong | dengue virus 2 | no rank | 142 | 4 |
| china | guangdong | dengue virus 3 | no rank | 81 | 1 |
| china | guangdong | dengue virus 4 | no rank | 58 | 0 |
| china | guangdong | equine hepacivirus | species | 0 | 1 |
| china | guangdong | equine pegivirus | no rank | 0 | 1 |
| china | guangdong | flavivirus | genus | 0 | 3 |
| china | guangdong | gb virus c | species | 0 | 3 |
| china | guangdong | hepacivirus | genus | 0 | 6 |
| china | guangdong | hepatitis c virus | species | 777 | 23 |
| china | guangdong | hepatitis c virus subtype 1b | no rank | 181 | 0 |
| china | guangdong | japanese encephalitis virus | species | 1 | 5 |
| china | guangdong | porcine pestivirus | species | 0 | 1 |
| china | guangdong | tembusu virus | species | 0 | 1 |
| china | guangdong | theiler's disease-associated virus | no rank | 0 | 1 |
| china | guangdong | yellow fever virus | species | 0 | 1 |
| china | guangdong | zika virus | species | 3 | 3 |
| china | guangxi | atypical porcine pestivirus | no rank | 0 | 1 |
| china | guangxi | bat hepacivirus c1 | species | 1 | 0 |
| china | guangxi | classical swine fever virus | species | 32 | 3 |
| china | guangxi | dengue virus | species | 0 | 6 |
| china | guangxi | dengue virus 1 | no rank | 0 | 1 |
| china | guangxi | dengue virus 2 | no rank | 1 | 2 |
| china | guangxi | dengue virus 3 | no rank | 1 | 1 |
| china | guangxi | gb virus c | species | 0 | 5 |
| china | guangxi | hepacivirus | genus | 0 | 14 |
| china | guangxi | hepatitis c virus | species | 0 | 32 |
| china | guangxi | hepatitis c virus subtype 3b | no rank | 10 | 0 |
| china | guangxi | hepatitis c virus subtype 6a | no rank | 10 | 0 |
| china | guangxi | hepatitis c virus subtype 6e | no rank | 1 | 0 |
| china | guangxi | japanese encephalitis virus | species | 19 | 4 |
| china | guangxi | porcine pestivirus | species | 0 | 1 |
| china | guangxi | tembusu virus | species | 4 | 1 |
| china | guizhou | classical swine fever virus | species | 2 | 0 |
| china | guizhou | dengue virus | species | 0 | 2 |
| china | guizhou | dengue virus 1 | no rank | 0 | 1 |
| china | guizhou | dengue virus 2 | no rank | 5 | 0 |
| china | guizhou | flavivirus | genus | 0 | 1 |
| china | guizhou | hepacivirus | genus | 0 | 1 |
| china | guizhou | hepatitis c virus | species | 0 | 1 |
| china | guizhou | japanese encephalitis virus | species | 4 | 6 |
| china | guizhou | jingmen tick virus | no rank | 13 | 0 |
| china | guizhou | zika virus | species | 2 | 0 |
| china | hainan | classical swine fever virus | species | 5 | 0 |
| china | hainan | dengue virus | species | 0 | 19 |
| china | hainan | dengue virus 1 | no rank | 12 | 0 |
| china | hainan | dengue virus 2 | no rank | 3 | 4 |
| china | hainan | dengue virus 3 | no rank | 0 | 2 |
| china | hainan | flavivirus | genus | 0 | 1 |
| china | hainan | hepacivirus | genus | 0 | 1 |
| china | hainan | hepatitis c virus | species | 46 | 0 |
| china | hainan | japanese encephalitis virus | species | 0 | 4 |
| china | hainan | quang binh virus | species | 7 | 0 |
| china | hebei | bovine viral diarrhea virus 1 | species | 1 | 1 |
| china | hebei | classical swine fever virus | species | 3 | 1 |
| china | hebei | gb virus c | species | 0 | 3 |
| china | hebei | hepacivirus | genus | 0 | 7 |
| china | hebei | hepatitis c virus | species | 1 | 17 |
| china | hebei | japanese encephalitis virus | species | 0 | 1 |
| china | hebei | tembusu virus | species | 1 | 0 |
| china | heilongjiang | alongshan virus | species | 13 | 0 |
| china | heilongjiang | bovine viral diarrhea virus 1 | species | 19 | 1 |
| china | heilongjiang | classical swine fever virus | species | 12 | 1 |
| china | heilongjiang | equine hepacivirus | species | 0 | 1 |
| china | heilongjiang | equine pegivirus | no rank | 0 | 1 |
| china | heilongjiang | gb virus c | species | 0 | 1 |
| china | heilongjiang | hepacivirus | genus | 0 | 1 |
| china | heilongjiang | hepatitis c virus | species | 0 | 2 |
| china | heilongjiang | japanese encephalitis virus | species | 6 | 2 |
| china | heilongjiang | jingmen tick virus | no rank | 2 | 0 |
| china | heilongjiang | theiler's disease-associated virus | no rank | 0 | 1 |
| china | heilongjiang | tick-borne encephalitis virus | species | 6 | 2 |
| china | henan | atypical porcine pestivirus | no rank | 1 | 0 |
| china | henan | bovine viral diarrhea virus 1 | species | 0 | 1 |
| china | henan | bovine viral diarrhea virus 3 | species | 0 | 1 |
| china | henan | bovine viral diarrhea virus type 1a | no rank | 0 | 1 |
| china | henan | classical swine fever virus | species | 45 | 2 |
| china | henan | culex flavivirus | species | 0 | 1 |
| china | henan | dengue virus | species | 0 | 3 |
| china | henan | dengue virus 1 | no rank | 24 | 1 |
| china | henan | dengue virus 2 | no rank | 5 | 0 |
| china | henan | dengue virus 3 | no rank | 1 | 1 |
| china | henan | flavivirus | genus | 0 | 1 |
| china | henan | gb virus c | species | 0 | 1 |
| china | henan | hepacivirus | genus | 0 | 7 |
| china | henan | hepatitis c virus | species | 0 | 22 |
| china | henan | japanese encephalitis virus | species | 12 | 11 |
| china | henan | jingmen tick virus | no rank | 3 | 0 |
| china | henan | tembusu virus | species | 1 | 0 |
| china | henan | tick-borne encephalitis virus | species | 0 | 1 |
| china | henan | zika virus | species | 1 | 0 |
| china | hubei | aedes flavivirus | species | 1 | 0 |
| china | hubei | bovine viral diarrhea virus 1 | species | 1 | 0 |
| china | hubei | classical swine fever virus | species | 1 | 0 |
| china | hubei | culex flavivirus | species | 1 | 1 |
| china | hubei | dengue virus | species | 0 | 1 |
| china | hubei | gb virus c | species | 0 | 1 |
| china | hubei | hepacivirus | genus | 0 | 11 |
| china | hubei | hepatitis c virus | species | 108 | 15 |
| china | hubei | hepatitis c virus subtype 1b | no rank | 1 | 0 |
| china | hubei | japanese encephalitis virus | species | 2 | 4 |
| china | hubei | quang binh virus | species | 8 | 0 |
| china | hunan | bovine viral diarrhea virus 3 | species | 1 | 0 |
| china | hunan | classical swine fever virus | species | 10 | 1 |
| china | hunan | dengue virus 2 | no rank | 49 | 0 |
| china | hunan | hepacivirus | genus | 0 | 2 |
| china | hunan | hepatitis c virus | species | 1 | 7 |
| china | hunan | hepatitis c virus subtype 1b | no rank | 1 | 0 |
| china | hunan | hepatitis c virus subtype 4a | no rank | 1 | 0 |
| china | hunan | hepatitis c virus subtype 6a | no rank | 1 | 0 |
| china | hunan | japanese encephalitis virus | species | 5 | 0 |
| china | inner mongolia | alongshan virus | species | 14911 | 0 |
| china | inner mongolia | bovine viral diarrhea virus 1 | species | 6 | 1 |
| china | inner mongolia | chaoyang virus | species | 2 | 0 |
| china | inner mongolia | classical swine fever virus | species | 1 | 0 |
| china | inner mongolia | culex flavivirus | species | 17 | 0 |
| china | inner mongolia | hanko virus | species | 2 | 0 |
| china | inner mongolia | hepacivirus | genus | 0 | 1 |
| china | inner mongolia | hepatitis c virus | species | 0 | 2 |
| china | inner mongolia | hepatitis c virus subtype 1b | no rank | 63 | 0 |
| china | inner mongolia | jingmen tick virus | no rank | 1 | 0 |
| china | inner mongolia | quang binh virus | species | 2 | 0 |
| china | inner mongolia | tick-borne encephalitis virus | species | 1 | 1 |
| china | jiangsu | border disease virus | species | 0 | 2 |
| china | jiangsu | bovine viral diarrhea virus 1 | species | 0 | 1 |
| china | jiangsu | dengue virus 1 | no rank | 1 | 0 |
| china | jiangsu | gb virus c | species | 0 | 3 |
| china | jiangsu | hepacivirus | genus | 0 | 6 |
| china | jiangsu | hepatitis c virus | species | 190 | 18 |
| china | jiangsu | japanese encephalitis virus | species | 0 | 1 |
| china | jiangsu | macrobrachium flavivirus 1 | species | 1 | 0 |
| china | jiangsu | tembusu virus | species | 1 | 1 |
| china | jiangxi | atypical porcine pestivirus | no rank | 1 | 0 |
| china | jiangxi | classical swine fever virus | species | 2 | 0 |
| china | jiangxi | dengue virus 1 | no rank | 83 | 0 |
| china | jiangxi | dengue virus 2 | no rank | 15 | 0 |
| china | jiangxi | gb virus c | species | 0 | 1 |
| china | jiangxi | hepatitis c virus | species | 1 | 2 |
| china | jiangxi | zika virus | species | 6 | 0 |
| china | jilin | alongshan virus | species | 2 | 0 |
| china | jilin | border disease virus | species | 0 | 1 |
| china | jilin | bovine viral diarrhea virus 1 | species | 2 | 4 |
| china | jilin | bovine viral diarrhea virus 2 | no rank | 0 | 1 |
| china | jilin | classical swine fever virus | species | 2 | 2 |
| china | jilin | dengue virus 1 | no rank | 1 | 0 |
| china | jilin | gb virus c | species | 0 | 1 |
| china | jilin | hepacivirus | genus | 0 | 2 |
| china | jilin | hepatitis c virus | species | 0 | 5 |
| china | jilin | japanese encephalitis virus | species | 0 | 1 |
| china | jilin | pestivirus | genus | 0 | 1 |
| china | jilin | tick-borne encephalitis virus | species | 3 | 1 |
| china | liaoning | bovine viral diarrhea virus 1 | species | 0 | 1 |
| china | liaoning | classical swine fever virus | species | 3 | 1 |
| china | liaoning | culex flavivirus | species | 1 | 1 |
| china | liaoning | donggang virus | species | 1 | 0 |
| china | liaoning | flavivirus | genus | 0 | 1 |
| china | liaoning | gb virus c | species | 0 | 1 |
| china | liaoning | hepacivirus | genus | 0 | 4 |
| china | liaoning | hepatitis c virus | species | 0 | 7 |
| china | liaoning | hepatitis c virus subtype 2a | no rank | 2 | 0 |
| china | liaoning | japanese encephalitis virus | species | 8 | 6 |
| china | ningxia | bovine viral diarrhea virus 1 | species | 13 | 1 |
| china | ningxia | classical swine fever virus | species | 1 | 0 |
| china | ningxia | hepatitis c virus | species | 0 | 2 |
| china | ningxia | japanese encephalitis virus | species | 1 | 0 |
| china | qinghai | bovine viral diarrhea virus 1 | species | 38 | 2 |
| china | qinghai | bovine viral diarrhea virus 2 | no rank | 0 | 1 |
| china | qinghai | gb virus c | species | 0 | 1 |
| china | qinghai | japanese encephalitis virus | species | 0 | 1 |
| china | shaanxi | classical swine fever virus | species | 1 | 0 |
| china | shaanxi | culex flavivirus | species | 0 | 1 |
| china | shaanxi | gb virus c | species | 0 | 1 |
| china | shaanxi | hepatitis c virus | species | 0 | 4 |
| china | shaanxi | japanese encephalitis virus | species | 2 | 4 |
| china | shandong | bovine viral diarrhea virus 1 | species | 0 | 2 |
| china | shandong | classical swine fever virus | species | 63 | 1 |
| china | shandong | culex flavivirus | species | 383 | 1 |
| china | shandong | gb virus c | species | 0 | 1 |
| china | shandong | hepatitis c virus | species | 15 | 7 |
| china | shandong | japanese encephalitis virus | species | 6 | 5 |
| china | shandong | jingmen tick virus | no rank | 3 | 0 |
| china | shandong | kamiti river virus | species | 0 | 1 |
| china | shandong | ntaya virus | species | 0 | 1 |
| china | shandong | quang binh virus | species | 5 | 0 |
| china | shandong | tembusu virus | species | 0 | 3 |
| china | shanghai shi | dengue virus | species | 0 | 2 |
| china | shanghai shi | dengue virus 1 | no rank | 28 | 0 |
| china | shanghai shi | dengue virus 2 | no rank | 27 | 0 |
| china | shanghai shi | dengue virus 3 | no rank | 11 | 0 |
| china | shanghai shi | dengue virus 4 | no rank | 2 | 0 |
| china | shanghai shi | flavivirus | genus | 0 | 1 |
| china | shanghai shi | gb virus c | species | 0 | 2 |
| china | shanghai shi | hepacivirus | genus | 0 | 5 |
| china | shanghai shi | hepatitis c virus | species | 90 | 21 |
| china | shanghai shi | hepatitis c virus subtype 1b | no rank | 1 | 0 |
| china | shanghai shi | japanese encephalitis virus | species | 0 | 3 |
| china | shanghai shi | west nile virus | species | 0 | 2 |
| china | shanghai shi | zika virus | species | 0 | 1 |
| china | shanxi | culex flavivirus | species | 0 | 1 |
| china | shanxi | dengue virus | species | 0 | 1 |
| china | shanxi | gb virus c | species | 0 | 2 |
| china | shanxi | hepacivirus | genus | 0 | 3 |
| china | shanxi | hepatitis c virus | species | 0 | 11 |
| china | shanxi | japanese encephalitis virus | species | 0 | 7 |
| china | shanxi | murray valley encephalitis virus | species | 0 | 1 |
| china | shanxi | tick-borne encephalitis virus | species | 0 | 1 |
| china | shanxi | yellow fever virus | species | 0 | 1 |
| china | sichuan | bovine viral diarrhea virus 1 | species | 4 | 0 |
| china | sichuan | classical swine fever virus | species | 8 | 0 |
| china | sichuan | culex flavivirus | species | 0 | 1 |
| china | sichuan | dengue virus 1 | no rank | 12 | 0 |
| china | sichuan | gb virus c | species | 0 | 1 |
| china | sichuan | goose pegivirus 1 | species | 1 | 0 |
| china | sichuan | goose pegivirus 2 | species | 1 | 0 |
| china | sichuan | hepacivirus | genus | 0 | 3 |
| china | sichuan | hepatitis c virus | species | 0 | 14 |
| china | sichuan | japanese encephalitis virus | species | 16 | 10 |
| china | tianjin shi | hepacivirus | genus | 0 | 2 |
| china | tianjin shi | hepatitis c virus | species | 0 | 1 |
| china | tibet | bovine viral diarrhea virus 1 | species | 0 | 1 |
| china | tibet | hepacivirus | genus | 0 | 1 |
| china | tibet | hepatitis c virus | species | 0 | 2 |
| china | tibet | japanese encephalitis virus | species | 0 | 7 |
| china | tibet | tick-borne encephalitis virus | species | 0 | 1 |
| china | xinjiang | border disease virus | species | 6 | 0 |
| china | xinjiang | bovine viral diarrhea virus 1 | species | 39 | 1 |
| china | xinjiang | bovine viral diarrhea virus type 1b | no rank | 1 | 0 |
| china | xinjiang | classical swine fever virus | species | 3 | 0 |
| china | xinjiang | dengue virus | species | 0 | 3 |
| china | xinjiang | flavivirus | genus | 0 | 1 |
| china | xinjiang | gb virus c | species | 0 | 2 |
| china | xinjiang | hepacivirus | genus | 0 | 5 |
| china | xinjiang | hepatitis c virus | species | 0 | 9 |
| china | xinjiang | hepatitis c virus subtype 1b | no rank | 2 | 0 |
| china | xinjiang | japanese encephalitis virus | species | 0 | 5 |
| china | xinjiang | kedougou virus | species | 0 | 1 |
| china | xinjiang | langat virus | species | 0 | 1 |
| china | xinjiang | powassan virus | species | 0 | 1 |
| china | xinjiang | sepik virus | species | 0 | 1 |
| china | xinjiang | tick-borne encephalitis virus | species | 0 | 6 |
| china | xinjiang | west nile virus | species | 0 | 2 |
| china | yunnan | aedes flavivirus | species | 3 | 2 |
| china | yunnan | apoi virus | species | 0 | 1 |
| china | yunnan | chaoyang virus | species | 0 | 1 |
| china | yunnan | classical swine fever virus | species | 16 | 0 |
| china | yunnan | culex flavivirus | species | 1 | 2 |
| china | yunnan | dengue virus | species | 3 | 15 |
| china | yunnan | dengue virus 1 | no rank | 94 | 0 |
| china | yunnan | dengue virus 2 | no rank | 81 | 0 |
| china | yunnan | dengue virus 3 | no rank | 23 | 1 |
| china | yunnan | dengue virus 4 | no rank | 12 | 0 |
| china | yunnan | flavivirus | genus | 0 | 6 |
| china | yunnan | gb virus c | species | 65 | 3 |
| china | yunnan | hepacivirus | genus | 0 | 16 |
| china | yunnan | hepatitis c virus | species | 24 | 33 |
| china | yunnan | hepatitis c virus subtype 6k | no rank | 4 | 0 |
| china | yunnan | hepatitis c virus subtype 6n | no rank | 2 | 0 |
| china | yunnan | human pegivirus | no rank | 0 | 1 |
| china | yunnan | japanese encephalitis virus | species | 104 | 16 |
| china | yunnan | jingmen tick virus | no rank | 3 | 0 |
| china | yunnan | kamiti river virus | species | 0 | 1 |
| china | yunnan | kyasanur forest disease virus | species | 0 | 1 |
| china | yunnan | langat virus | species | 0 | 1 |
| china | yunnan | modoc virus | species | 0 | 1 |
| china | yunnan | mosquito flavivirus | no rank | 2 | 0 |
| china | yunnan | murray valley encephalitis virus | species | 0 | 1 |
| china | yunnan | nakiwogo virus | species | 0 | 1 |
| china | yunnan | palm creek virus | species | 0 | 1 |
| china | yunnan | parramatta river virus | species | 0 | 1 |
| china | yunnan | powassan virus | species | 0 | 2 |
| china | yunnan | quang binh virus | species | 0 | 2 |
| china | yunnan | rio bravo virus | species | 0 | 1 |
| china | yunnan | st. louis encephalitis virus | species | 0 | 1 |
| china | yunnan | tamana bat virus | species | 0 | 1 |
| china | yunnan | tick-borne encephalitis virus | species | 0 | 2 |
| china | yunnan | usutu virus | species | 0 | 1 |
| china | yunnan | west nile virus | species | 0 | 1 |
| china | yunnan | xishuangbanna aedes flavivirus | species | 0 | 1 |
| china | yunnan | yellow fever virus | species | 0 | 1 |
| china | yunnan | yokose virus | species | 1 | 1 |
| china | zhejiang | classical swine fever virus | species | 12 | 0 |
| china | zhejiang | dengue virus | species | 0 | 8 |
| china | zhejiang | dengue virus 1 | no rank | 76 | 1 |
| china | zhejiang | dengue virus 2 | no rank | 200 | 0 |
| china | zhejiang | dengue virus 3 | no rank | 12 | 1 |
| china | zhejiang | dengue virus 4 | no rank | 1 | 0 |
| china | zhejiang | gb virus c | species | 0 | 1 |
| china | zhejiang | hepacivirus | genus | 0 | 2 |
| china | zhejiang | hepatitis c virus | species | 1 | 7 |
| china | zhejiang | japanese encephalitis virus | species | 244 | 11 |
| china | zhejiang | macrobrachium flavivirus 1 | species | 1 | 0 |
| china | zhejiang | tembusu virus | species | 2 | 0 |
| colombia | | atrato flavi-like virus 1 | species | 2 | 0 |
| colombia | | bovine viral diarrhea virus 1 | species | 12 | 0 |
| colombia | | classical swine fever virus | species | 21 | 0 |
| colombia | | culex flavivirus | species | 2 | 0 |
| colombia | | dengue virus | species | 34 | 0 |
| colombia | | dengue virus 1 | no rank | 81 | 0 |
| colombia | | dengue virus 2 | no rank | 176 | 0 |
| colombia | | dengue virus 3 | no rank | 107 | 0 |
| colombia | | dengue virus 4 | no rank | 6 | 0 |
| colombia | | gb virus c | species | 18 | 0 |
| colombia | | hepatitis c virus | species | 145 | 0 |
| colombia | | jingmen tick virus | no rank | 6 | 0 |
| colombia | | west nile virus | species | 4 | 1 |
| colombia | | yellow fever virus | species | 5 | 1 |
| colombia | | zika virus | species | 33 | 1 |
| colombia | amazonas department | dengue virus | species | 18 | 2 |
| colombia | amazonas department | gb virus c | species | 0 | 1 |
| colombia | amazonas department | hepacivirus | genus | 0 | 1 |
| colombia | amazonas department | hepatitis c virus | species | 0 | 2 |
| colombia | antioquia department | dengue virus | species | 0 | 6 |
| colombia | antioquia department | dengue virus 1 | no rank | 1 | 0 |
| colombia | antioquia department | dengue virus 2 | no rank | 2 | 0 |
| colombia | antioquia department | dengue virus 3 | no rank | 10 | 2 |
| colombia | antioquia department | dengue virus 4 | no rank | 7 | 0 |
| colombia | antioquia department | hepacivirus | genus | 0 | 2 |
| colombia | antioquia department | hepatitis c virus | species | 0 | 4 |
| colombia | antioquia department | west nile virus | species | 2 | 0 |
| colombia | antioquia department | yellow fever virus | species | 0 | 1 |
| colombia | antioquia department | zika virus | species | 0 | 1 |
| colombia | arauca department | dengue virus | species | 3 | 1 |
| colombia | archipelago of san andres providencia and santa catalina colombia department | classical swine fever virus | species | 1 | 0 |
| colombia | archipelago of san andres providencia and santa catalina colombia department | dengue virus | species | 8 | 0 |
| colombia | archipelago of san andres providencia and santa catalina colombia department | hepacivirus | genus | 0 | 1 |
| colombia | archipelago of san andres providencia and santa catalina colombia department | hepatitis c virus | species | 0 | 1 |
| colombia | atlantico department | classical swine fever virus | species | 5 | 0 |
| colombia | atlantico department | dengue virus | species | 1 | 0 |
| colombia | atlantico department | yellow fever virus | species | 0 | 1 |
| colombia | atlantico department | zika virus | species | 39 | 0 |
| colombia | bolivar department | classical swine fever virus | species | 2 | 0 |
| colombia | bolivar department | dengue virus 3 | no rank | 1 | 0 |
| colombia | bolivar department | flavivirus | genus | 0 | 1 |
| colombia | bolivar department | st. louis encephalitis virus | species | 0 | 1 |
| colombia | bolivar department | west nile virus | species | 0 | 1 |
| colombia | boyaca department | classical swine fever virus | species | 3 | 0 |
| colombia | caldas department | dengue virus | species | 0 | 2 |
| colombia | captial district | dengue virus | species | 1 | 1 |
| colombia | captial district | gb virus c | species | 0 | 1 |
| colombia | captial district | hepacivirus | genus | 0 | 1 |
| colombia | captial district | hepatitis c virus | species | 13 | 4 |
| colombia | captial district | yellow fever virus | species | 0 | 1 |
| colombia | caqueta department | dengue virus | species | 43 | 0 |
| colombia | caqueta department | dengue virus 3 | no rank | 6 | 0 |
| colombia | casanare department | dengue virus | species | 2 | 1 |
| colombia | cauca department | classical swine fever virus | species | 0 | 1 |
| colombia | cauca department | dengue virus | species | 0 | 7 |
| colombia | cauca department | dengue virus 3 | no rank | 0 | 1 |
| colombia | cauca department | st. louis encephalitis virus | species | 0 | 1 |
| colombia | cauca department | west nile virus | species | 0 | 1 |
| colombia | cauca department | yellow fever virus | species | 0 | 1 |
| colombia | cauca department | zika virus | species | 0 | 1 |
| colombia | cesar department | classical swine fever virus | species | 51 | 0 |
| colombia | cesar department | dengue virus | species | 7 | 1 |
| colombia | cesar department | dengue virus 4 | no rank | 1 | 0 |
| colombia | cesar department | yellow fever virus | species | 0 | 1 |
| colombia | choco department | dengue virus | species | 92 | 0 |
| colombia | choco department | hepacivirus | genus | 0 | 1 |
| colombia | choco department | hepatitis c virus | species | 0 | 1 |
| colombia | cordoba department | culex flavivirus | species | 43 | 0 |
| colombia | cordoba department | dengue virus | species | 4 | 1 |
| colombia | cordoba department | dengue virus 2 | no rank | 1 | 0 |
| colombia | cordoba department | japanese encephalitis virus | species | 0 | 2 |
| colombia | cordoba department | kunjin virus | no rank | 0 | 1 |
| colombia | cordoba department | langat virus | species | 0 | 1 |
| colombia | cordoba department | powassan virus | species | 0 | 1 |
| colombia | cordoba department | st. louis encephalitis virus | species | 6 | 0 |
| colombia | cordoba department | west nile virus | species | 5 | 1 |
| colombia | cordoba department | yellow fever virus | species | 1 | 0 |
| colombia | cundinamarca department | classical swine fever virus | species | 5 | 0 |
| colombia | cundinamarca department | dengue virus | species | 3 | 0 |
| colombia | cundinamarca department | yellow fever virus | species | 0 | 1 |
| colombia | guainia department | classical swine fever virus | species | 1 | 0 |
| colombia | guainia department | dengue virus | species | 62 | 0 |
| colombia | guaviare department | dengue virus | species | 6 | 0 |
| colombia | guaviare department | dengue virus 2 | no rank | 5 | 0 |
| colombia | guaviare department | dengue virus 3 | no rank | 4 | 0 |
| colombia | huila department | dengue virus | species | 5 | 3 |
| colombia | huila department | dengue virus 3 | no rank | 2 | 0 |
| colombia | la guajira department | dengue virus | species | 0 | 1 |
| colombia | la guajira department | dengue virus 3 | no rank | 5 | 0 |
| colombia | magdalena department | classical swine fever virus | species | 1 | 0 |
| colombia | magdalena department | dengue virus | species | 0 | 1 |
| colombia | magdalena department | gb virus c | species | 0 | 1 |
| colombia | magdalena department | hepacivirus | genus | 0 | 1 |
| colombia | magdalena department | hepatitis c virus | species | 0 | 2 |
| colombia | magdalena department | yellow fever virus | species | 0 | 1 |
| colombia | meta department | dengue virus | species | 1 | 0 |
| colombia | meta department | dengue virus 3 | no rank | 3 | 0 |
| colombia | meta department | yellow fever virus | species | 1 | 0 |
| colombia | narino department | dengue virus | species | 3 | 0 |
| colombia | narino department | dengue virus 2 | no rank | 1 | 0 |
| colombia | narino department | hepacivirus | genus | 0 | 1 |
| colombia | narino department | hepatitis c virus | species | 0 | 1 |
| colombia | norte de santander department | classical swine fever virus | species | 3 | 0 |
| colombia | norte de santander department | dengue virus | species | 0 | 2 |
| colombia | norte de santander department | dengue virus 1 | no rank | 33 | 0 |
| colombia | norte de santander department | dengue virus 2 | no rank | 10 | 0 |
| colombia | norte de santander department | dengue virus 3 | no rank | 5 | 0 |
| colombia | norte de santander department | dengue virus 4 | no rank | 3 | 0 |
| colombia | norte de santander department | zika virus | species | 0 | 1 |
| colombia | putumayo department | dengue virus | species | 5 | 1 |
| colombia | putumayo department | dengue virus 3 | no rank | 3 | 0 |
| colombia | quindio department | dengue virus | species | 5 | 0 |
| colombia | risaralda department | dengue virus | species | 0 | 2 |
| colombia | risaralda department | zika virus | species | 0 | 1 |
| colombia | santander department | classical swine fever virus | species | 13 | 1 |
| colombia | santander department | dengue virus | species | 5 | 13 |
| colombia | santander department | dengue virus 1 | no rank | 88 | 0 |
| colombia | santander department | dengue virus 2 | no rank | 41 | 0 |
| colombia | santander department | dengue virus 3 | no rank | 54 | 1 |
| colombia | santander department | dengue virus 4 | no rank | 26 | 0 |
| colombia | santander department | yellow fever virus | species | 0 | 1 |
| colombia | santander department | zika virus | species | 7 | 2 |
| colombia | sucre department | classical swine fever virus | species | 1 | 0 |
| colombia | sucre department | dengue virus | species | 0 | 1 |
| colombia | sucre department | dengue virus 3 | no rank | 3 | 0 |
| colombia | sucre department | zika virus | species | 5 | 1 |
| colombia | tolima department | dengue virus | species | 2 | 1 |
| colombia | valle del cauca department | dengue virus | species | 3 | 6 |
| colombia | valle del cauca department | dengue virus 2 | no rank | 1 | 0 |
| colombia | valle del cauca department | dengue virus 3 | no rank | 0 | 1 |
| colombia | valle del cauca department | hepatitis c virus | species | 0 | 1 |
| colombia | valle del cauca department | zika virus | species | 2 | 1 |
| comoros | | dengue virus | species | 0 | 10 |
| comoros | | dengue virus 1 | no rank | 1 | 0 |
| comoros | | dengue virus 3 | no rank | 1 | 0 |
| comoros | | hepatitis c virus | species | 0 | 1 |
| comoros | | tick-borne encephalitis virus | species | 0 | 1 |
| comoros | | west nile virus | species | 0 | 1 |
| cook islands | | dengue virus 1 | no rank | 5 | 0 |
| cook islands | | dengue virus 3 | no rank | 2 | 0 |
| cook islands | | dengue virus 4 | no rank | 1 | 0 |
| cook islands | | zika virus | species | 8 | 0 |
| costa rica | | bovine viral diarrhea virus 1 | species | 8 | 0 |
| costa rica | | bovine viral diarrhea virus 2 | no rank | 2 | 0 |
| costa rica | | dengue virus | species | 4 | 0 |
| costa rica | | dengue virus 1 | no rank | 32 | 0 |
| costa rica | | dengue virus 2 | no rank | 17 | 0 |
| costa rica | | dengue virus 3 | no rank | 3 | 0 |
| costa rica | | dengue virus 4 | no rank | 15 | 0 |
| costa rica | | hepacivirus sp. | species | 2 | 0 |
| costa rica | | hepatitis c virus | species | 7 | 0 |
| costa rica | | west nile virus | species | 1 | 0 |
| costa rica | limon province | dengue virus | species | 0 | 1 |
| costa rica | puntarenas province | dengue virus | species | 0 | 3 |
| croatia | | bovine viral diarrhea virus 1 | species | 20 | 0 |
| croatia | | classical swine fever virus | species | 4 | 0 |
| croatia | | dengue virus 1 | no rank | 2 | 0 |
| croatia | | hepatitis c virus | species | 221 | 0 |
| croatia | | west nile virus | species | 2 | 0 |
| croatia | brod-posavina county | hepatitis c virus | species | 0 | 1 |
| croatia | brod-posavina county | west nile virus | species | 0 | 2 |
| croatia | dubrovnik-neretva county | dengue virus | species | 0 | 1 |
| croatia | dubrovnik-neretva county | hepatitis c virus | species | 0 | 1 |
| croatia | koprivinka-krizevci county | tick-borne encephalitis virus | species | 0 | 1 |
| croatia | osijek-baranja county | hepatitis c virus | species | 0 | 1 |
| croatia | osijek-baranja county | tick-borne encephalitis virus | species | 4 | 0 |
| croatia | osijek-baranja county | west nile virus | species | 0 | 2 |
| croatia | primorje-gorski kotar county | hepacivirus | genus | 0 | 1 |
| croatia | primorje-gorski kotar county | hepatitis c virus | species | 0 | 3 |
| croatia | sisak-moslavina county | japanese encephalitis virus | species | 0 | 1 |
| croatia | sisak-moslavina county | usutu virus | species | 0 | 1 |
| croatia | sisak-moslavina county | west nile virus | species | 0 | 1 |
| croatia | split-dalmatia county | hepacivirus | genus | 0 | 1 |
| croatia | split-dalmatia county | hepatitis c virus | species | 0 | 3 |
| croatia | varazdin county | tick-borne encephalitis virus | species | 14 | 0 |
| croatia | vukovar-srijem county | japanese encephalitis virus | species | 0 | 1 |
| croatia | vukovar-srijem county | tick-borne encephalitis virus | species | 1 | 0 |
| croatia | vukovar-srijem county | usutu virus | species | 0 | 1 |
| croatia | vukovar-srijem county | west nile virus | species | 0 | 3 |
| croatia | zadar county | hepatitis c virus | species | 0 | 2 |
| croatia | zagreb city | classical swine fever virus | species | 140 | 0 |
| croatia | zagreb city | hepacivirus | genus | 0 | 1 |
| croatia | zagreb city | hepatitis c virus | species | 0 | 7 |
| croatia | zagreb city | usutu virus | species | 0 | 2 |
| croatia | zagreb county | hepacivirus | genus | 0 | 1 |
| croatia | zagreb county | hepatitis c virus | species | 0 | 7 |
| croatia | zagreb county | japanese encephalitis virus | species | 0 | 1 |
| croatia | zagreb county | tick-borne encephalitis virus | species | 1 | 0 |
| croatia | zagreb county | usutu virus | species | 2 | 3 |
| croatia | zagreb county | west nile virus | species | 0 | 1 |
| cuba | | classical swine fever virus | species | 15 | 0 |
| cuba | | dengue virus 1 | no rank | 1 | 0 |
| cuba | | dengue virus 2 | no rank | 33 | 0 |
| cuba | | dengue virus 3 | no rank | 25 | 1 |
| cuba | | dengue virus 4 | no rank | 4 | 0 |
| cuba | | gb virus c | species | 2 | 0 |
| cuba | | hepatitis c virus | species | 71 | 0 |
| cuba | | hepatitis c virus subtype 1b | no rank | 4 | 0 |
| cuba | | zika virus | species | 12 | 0 |
| cuba | cienfuegos province | dengue virus | species | 0 | 2 |
| cuba | guantanamo province | dengue virus | species | 0 | 2 |
| cuba | havana province | dengue virus | species | 0 | 35 |
| cuba | havana province | dengue virus 2 | no rank | 0 | 1 |
| cuba | havana province | dengue virus 3 | no rank | 0 | 6 |
| cuba | havana province | hepacivirus | genus | 0 | 2 |
| cuba | havana province | hepatitis c virus | species | 0 | 2 |
| cuba | havana province | yellow fever virus | species | 0 | 1 |
| cuba | holguin province | classical swine fever virus | species | 2 | 0 |
| cuba | pinar del rio province | classical swine fever virus | species | 1 | 0 |
| cuba | pinar del rio province | hepatitis c virus | species | 0 | 1 |
| cuba | sancti spiritus province | dengue virus | species | 0 | 2 |
| cuba | sancti spiritus province | west nile virus | species | 0 | 2 |
| cuba | santiago de cuba province | classical swine fever virus | species | 1 | 0 |
| cuba | santiago de cuba province | dengue virus | species | 0 | 20 |
| cuba | santiago de cuba province | dengue virus 1 | no rank | 0 | 3 |
| cuba | santiago de cuba province | dengue virus 2 | no rank | 0 | 4 |
| cuba | santiago de cuba province | dengue virus 4 | no rank | 0 | 1 |
| cuba | villa clara province | dengue virus | species | 0 | 1 |
| cuba | villa clara province | hepatitis c virus | species | 0 | 1 |
| curacao | | dengue virus 2 | no rank | 2 | 0 |
| cyprus | | hepacivirus | genus | 0 | 3 |
| cyprus | | hepatitis c virus | species | 269 | 4 |
| cyprus | | west nile virus | species | 2 | 1 |
| czech republic | | bovine hepacivirus | species | 1 | 0 |
| czech republic | | bovine viral diarrhea virus 1 | species | 15 | 0 |
| czech republic | | classical swine fever virus | species | 3 | 0 |
| czech republic | | hepacivirus sp. | species | 1 | 0 |
| czech republic | | hepatitis c virus | species | 21 | 0 |
| czech republic | | mosquito flavivirus | no rank | 5 | 0 |
| czech republic | | tick-borne encephalitis virus | species | 64 | 0 |
| czech republic | | usutu virus | species | 3 | 0 |
| czech republic | | west nile virus | species | 5 | 0 |
| czech republic | central bohemian region | tick-borne encephalitis virus | species | 0 | 7 |
| czech republic | central bohemian region | west nile virus | species | 0 | 2 |
| czech republic | karlovy vary region | tick-borne encephalitis virus | species | 0 | 1 |
| czech republic | karlovy vary region | west nile virus | species | 0 | 1 |
| czech republic | moravian-silesian region | tick-borne encephalitis virus | species | 62 | 0 |
| czech republic | moravian-silesian region | usutu virus | species | 21 | 0 |
| czech republic | moravian-silesian region | west nile virus | species | 0 | 2 |
| czech republic | olomouc region | tick-borne encephalitis virus | species | 0 | 2 |
| czech republic | plzen region | tick-borne encephalitis virus | species | 30 | 1 |
| czech republic | prague city | dengue virus | species | 0 | 1 |
| czech republic | prague city | hepacivirus | genus | 0 | 2 |
| czech republic | prague city | hepatitis c virus | species | 3 | 5 |
| czech republic | prague city | tick-borne encephalitis virus | species | 37 | 6 |
| czech republic | prague city | usutu virus | species | 10 | 0 |
| czech republic | prague city | west nile virus | species | 0 | 1 |
| czech republic | south bohemian region | tick-borne encephalitis virus | species | 14 | 5 |
| czech republic | south bohemian region | west nile virus | species | 0 | 1 |
| czech republic | south moravian region | flavivirus | genus | 0 | 2 |
| czech republic | south moravian region | hepacivirus | genus | 0 | 1 |
| czech republic | south moravian region | hepatitis c virus | species | 0 | 1 |
| czech republic | south moravian region | tick-borne encephalitis virus | species | 55 | 2 |
| czech republic | south moravian region | west nile virus | species | 109 | 7 |
| czech republic | usti nad labem region | tick-borne encephalitis virus | species | 9 | 0 |
| czech republic | vysocina region | flavivirus | genus | 0 | 1 |
| czech republic | vysocina region | tick-borne encephalitis virus | species | 0 | 2 |
| czech republic | vysocina region | west nile virus | species | 0 | 1 |
| czech republic | zlin region | tick-borne encephalitis virus | species | 773 | 0 |
| democratic republic of the congo | | bat pegivirus | no rank | 5 | 0 |
| democratic republic of the congo | | gb virus c | species | 1 | 0 |
| democratic republic of the congo | | hepatitis c virus | species | 356 | 0 |
| democratic republic of the congo | | hepatitis c virus subtype 4a | no rank | 5 | 0 |
| democratic republic of the congo | | hepatitis c virus subtype 4h | no rank | 1 | 0 |
| democratic republic of the congo | | hepatitis gb virus b | species | 30 | 0 |
| democratic republic of the congo | | human pegivirus | no rank | 13 | 0 |
| democratic republic of the congo | | rodent hepacivirus | species | 18 | 0 |
| democratic republic of the congo | | west nile virus | species | 1 | 0 |
| democratic republic of the congo | | yellow fever virus | species | 1 | 0 |
| democratic republic of the congo | kinshasa city | gb virus c | species | 0 | 1 |
| democratic republic of the congo | kinshasa city | hepatitis c virus | species | 10 | 3 |
| democratic republic of the congo | kongo central province | dengue virus | species | 0 | 1 |
| democratic republic of the congo | kongo central province | yellow fever virus | species | 0 | 1 |
| democratic republic of the congo | province orientale | dengue virus | species | 0 | 1 |
| democratic republic of the congo | province orientale | hepacivirus | genus | 0 | 1 |
| democratic republic of the congo | province orientale | hepatitis c virus | species | 0 | 1 |
| democratic republic of the congo | province orientale | west nile virus | species | 0 | 1 |
| democratic republic of the congo | south kivu province | hepatitis c virus | species | 0 | 1 |
| denmark | | bovine viral diarrhea virus 1 | species | 9 | 0 |
| denmark | | hepatitis c virus | species | 1151 | 0 |
| denmark | | human pegivirus genotype 2 | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus dbn-jfh1 | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus dh1-jfh1 | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus dh5-jfh1 | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus dh6-jfh1 | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus ed43(5'utr-ns2)/jfh1_t827a,t977s | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus h77(5'utr-ns2)/jfh1_v787a,q1247l | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus hk6a(5'utr-ns2)/jfh1_f350s,n417t | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus j4(5'utr-ns2)/jfh1_f886l,q1496l | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus j6(5'utr(1b-e1)-ns2)/jfh1 | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus j6(5'utr(2a-domi/ii)-ns2)/jfh1 | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus j6(5'utr(cell-atad1)-ns2)/jfh1 | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus j6(5'utr(cell-u3)-ns2)/jfh1 | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus j6(5'utr(cell-u3wts1)-ns2)/jfh1 | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus j6(5'utr(cell-u6)-ns2)/jfh1 | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus j6(5'utr-ns2)/jfh1 | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus j6/jfh1(dh6-ns5a) | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus j6/jfh1(ed43-ns5a) | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus j6/jfh1(h77c-ns5a) | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus j6/jfh1(hcv1-ns5a) | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus j6/jfh1(hk6a-ns5a) | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus j6/jfh1(j1-ns5a) | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus j6/jfh1(j4-ns5a) | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus j6/jfh1(j6-ns5a) | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus j6/jfh1(qc69-ns5a) | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus j6/jfh1(s52-ns5a) | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus j6/jfh1(sa13-ns5a) | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus j6/jfh1(tn-ns5a) | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus j6/jfh1-ed43(ns4a) | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus j6/jfh1-h77(ns4a) | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus j6/jfh1-hk6a(ns4a) | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus j6/jfh1-j4(ns4a) | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus j6/jfh1-j6(ns4a) | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus j6/jfh1-qc69(ns4a) | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus j6/jfh1-sa13(ns4a) | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus j6/jfh1-tn(ns4a) | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus j8(5'utr-ns2)/jfh1 | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus s52(5'utr-ns2)/jfh1_i793s, k1404q | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus s52/jfh1 | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus sa13(5'utr-ns2)/jfh1_a1022g,k1119r | no rank | 1 | 0 |
| denmark | | recombinant hepatitis c virus tn-jfh1 | no rank | 1 | 0 |
| denmark | | tick-borne encephalitis virus | species | 4 | 0 |
| denmark | capital region of denmark | hepacivirus | genus | 0 | 1 |
| denmark | capital region of denmark | hepatitis c virus | species | 8721 | 2 |
| denmark | region zealand | louping ill virus | species | 0 | 1 |
| denmark | region zealand | phocoena pestivirus | species | 1 | 0 |
| denmark | region zealand | tick-borne encephalitis virus | species | 0 | 2 |
| djibouti | | alkhumra hemorrhagic fever virus | no rank | 0 | 3 |
| djibouti | | dengue virus | species | 1 | 0 |
| djibouti | | dengue virus 1 | no rank | 1 | 0 |
| djibouti | | dengue virus 2 | no rank | 2 | 0 |
| djibouti | | dengue virus 3 | no rank | 4 | 0 |
| djibouti | djibouti region | dengue virus | species | 0 | 2 |
| djibouti | djibouti region | dengue virus 2 | no rank | 0 | 1 |
| djibouti | djibouti region | tick-borne encephalitis virus | species | 0 | 1 |
| djibouti | djibouti region | west nile virus | species | 0 | 2 |
| djibouti | djibouti region | yellow fever virus | species | 0 | 1 |
| dominica | | dengue virus | species | 0 | 1 |
| dominica | | dengue virus 1 | no rank | 3 | 0 |
| dominica | | dengue virus 2 | no rank | 3 | 0 |
| dominica | | dengue virus 3 | no rank | 1 | 0 |
| dominica | | dengue virus 4 | no rank | 20 | 0 |
| dominica | | zika virus | species | 0 | 1 |
| dominican republic | | bovine viral diarrhea virus 1 | species | 1 | 0 |
| dominican republic | | dengue virus 1 | no rank | 13 | 0 |
| dominican republic | | dengue virus 2 | no rank | 12 | 0 |
| dominican republic | | dengue virus 3 | no rank | 1 | 0 |
| dominican republic | | dengue virus 4 | no rank | 3 | 0 |
| dominican republic | | zika virus | species | 11 | 0 |
| dominican republic | baoruco province | flavivirus | genus | 0 | 1 |
| dominican republic | baoruco province | west nile virus | species | 0 | 1 |
| dominican republic | distrito nacional | dengue virus | species | 0 | 2 |
| dominican republic | distrito nacional | hepacivirus | genus | 0 | 1 |
| dominican republic | distrito nacional | zika virus | species | 27 | 0 |
| dominican republic | la romana province | dengue virus | species | 0 | 1 |
| dominican republic | monte cristi province | west nile virus | species | 0 | 1 |
| dominican republic | santo domingo province | dengue virus | species | 0 | 4 |
| dominican republic | santo domingo province | hepacivirus | genus | 0 | 1 |
| dominican republic | santo domingo province | zika virus | species | 8 | 0 |
| east timor | | classical swine fever virus | species | 0 | 1 |
| east timor | | dengue virus | species | 1 | 3 |
| east timor | | dengue virus 1 | no rank | 24 | 0 |
| east timor | | dengue virus 2 | no rank | 50 | 0 |
| east timor | | dengue virus 3 | no rank | 43 | 1 |
| east timor | | dengue virus 4 | no rank | 15 | 0 |
| ecuador | | classical swine fever virus | species | 4 | 0 |
| ecuador | | dengue virus | species | 26 | 0 |
| ecuador | | dengue virus 1 | no rank | 18 | 0 |
| ecuador | | dengue virus 2 | no rank | 8 | 0 |
| ecuador | | dengue virus 3 | no rank | 7 | 0 |
| ecuador | | dengue virus 4 | no rank | 15 | 0 |
| ecuador | | ilheus virus | species | 2 | 0 |
| ecuador | | naranjal virus | no rank | 2 | 0 |
| ecuador | | paraiso escondido virus | species | 2 | 0 |
| ecuador | | yellow fever virus | species | 5 | 0 |
| ecuador | | zika virus | species | 1 | 0 |
| ecuador | bolivar province | classical swine fever virus | species | 1 | 0 |
| ecuador | chimborazo province | classical swine fever virus | species | 3 | 0 |
| ecuador | cotopaxi province | classical swine fever virus | species | 1 | 0 |
| ecuador | el oro province | dengue virus 1 | no rank | 5 | 0 |
| ecuador | el oro province | dengue virus 2 | no rank | 27 | 0 |
| ecuador | el oro province | dengue virus 4 | no rank | 1 | 0 |
| ecuador | el oro province | zika virus | species | 9 | 0 |
| ecuador | esmeraldas province | zika virus | species | 2 | 0 |
| ecuador | francisco de orellana province | classical swine fever virus | species | 5 | 0 |
| ecuador | galapagos province | west nile virus | species | 0 | 10 |
| ecuador | guayas province | classical swine fever virus | species | 1 | 0 |
| ecuador | guayas province | dengue virus | species | 13 | 0 |
| ecuador | guayas province | dengue virus 2 | no rank | 1 | 0 |
| ecuador | guayas province | west nile virus | species | 0 | 1 |
| ecuador | los rios province | classical swine fever virus | species | 2 | 0 |
| ecuador | los rios province | flavivirus | genus | 0 | 1 |
| ecuador | manabi province | classical swine fever virus | species | 1 | 0 |
| ecuador | manabi province | zika virus | species | 3251 | 0 |
| ecuador | pichincha province | classical swine fever virus | species | 4 | 0 |
| ecuador | santa elena province | classical swine fever virus | species | 2 | 0 |
| ecuador | santo domingo de los tsachilas province | classical swine fever virus | species | 2 | 0 |
| ecuador | sucumbios province | classical swine fever virus | species | 1 | 0 |
| ecuador | zamora chinchipe province | classical swine fever virus | species | 2 | 0 |
| egypt | | alkhumra hemorrhagic fever virus | no rank | 12 | 1 |
| egypt | | bovine viral diarrhea virus 1 | species | 9 | 0 |
| egypt | | bovine viral diarrhea virus 1-nadl | no rank | 5 | 0 |
| egypt | | bovine viral diarrhea virus 3 | species | 3 | 0 |
| egypt | | classical swine fever virus | species | 1 | 0 |
| egypt | | gb virus c | species | 1 | 0 |
| egypt | | hepatitis c virus | species | 1145 | 0 |
| egypt | | hepatitis c virus ed43 | no rank | 18 | 0 |
| egypt | | hepatitis c virus genotype 4 | no rank | 2 | 0 |
| egypt | | hepatitis c virus subtype 4a | no rank | 74 | 0 |
| egypt | | hepatitis c virus subtype 4m | no rank | 1 | 0 |
| egypt | | hepatitis c virus subtype 4o | no rank | 1 | 0 |
| egypt | | non-primate hepacivirus | species | 8 | 0 |
| egypt | | west nile virus | species | 43 | 0 |
| egypt | alexandria governorate | bovine viral diarrhea virus 3 | species | 8 | 0 |
| egypt | alexandria governorate | dengue virus | species | 0 | 1 |
| egypt | alexandria governorate | hepacivirus | genus | 0 | 3 |
| egypt | alexandria governorate | hepatitis c virus | species | 5 | 13 |
| egypt | alexandria governorate | hepatitis c virus genotype 4 | no rank | 0 | 1 |
| egypt | alexandria governorate | west nile virus | species | 0 | 1 |
| egypt | alexandria governorate | yellow fever virus | species | 0 | 1 |
| egypt | aswan governorate | dengue virus | species | 0 | 1 |
| egypt | asyut governorate | hepacivirus | genus | 0 | 2 |
| egypt | asyut governorate | hepatitis c virus | species | 9 | 3 |
| egypt | beheira governorate | bovine viral diarrhea virus 3 | species | 3 | 0 |
| egypt | beheira governorate | hepatitis c virus | species | 5 | 0 |
| egypt | beni suef governorate | bovine viral diarrhea virus 1 | species | 3 | 0 |
| egypt | beni suef governorate | hepatitis c virus | species | 5 | 0 |
| egypt | cairo governorate | hepacivirus | genus | 0 | 15 |
| egypt | cairo governorate | hepatitis c virus | species | 9 | 35 |
| egypt | cairo governorate | hepatitis c virus genotype 1 | no rank | 14 | 0 |
| egypt | cairo governorate | hepatitis c virus genotype 4 | no rank | 45 | 0 |
| egypt | cairo governorate | west nile virus | species | 0 | 1 |
| egypt | dakahlia governorate | hepatitis c virus | species | 65 | 0 |
| egypt | damietta governorate | bovine viral diarrhea virus 3 | species | 1 | 0 |
| egypt | faiyum governorate | bovine viral diarrhea virus 1 | species | 0 | 1 |
| egypt | faiyum governorate | hepatitis c virus | species | 0 | 1 |
| egypt | gharbia governorate | hepatitis c virus | species | 0 | 2 |
| egypt | giza governorate | west nile virus | species | 0 | 1 |
| egypt | ismailia governorate | bovine viral diarrhea virus 1 | species | 0 | 1 |
| egypt | ismailia governorate | hepatitis c virus | species | 0 | 2 |
| egypt | kafr el sheikh governorate | bovine viral diarrhea virus 3 | species | 1 | 0 |
| egypt | luxor governorate | hepatitis c virus | species | 14 | 0 |
| egypt | matrouh governorate | hepatitis c virus | species | 7 | 1 |
| egypt | menoufia governorate | bovine viral diarrhea virus 1 | species | 0 | 1 |
| egypt | menoufia governorate | hepatitis c virus | species | 213 | 2 |
| egypt | menoufia governorate | west nile virus | species | 0 | 1 |
| egypt | minya governorate | bovine viral diarrhea virus 1 | species | 1 | 0 |
| egypt | minya governorate | bovine viral diarrhea virus 3 | species | 1 | 0 |
| egypt | minya governorate | hepatitis c virus | species | 10 | 2 |
| egypt | north sinai governorate | hepacivirus | genus | 0 | 1 |
| egypt | north sinai governorate | hepatitis c virus | species | 0 | 1 |
| egypt | qalyubia governorate | hepatitis c virus | species | 9 | 0 |
| egypt | qena governorate | hepacivirus | genus | 0 | 1 |
| egypt | qena governorate | hepatitis c virus | species | 0 | 1 |
| egypt | red sea governorate | alkhumra hemorrhagic fever virus | no rank | 0 | 1 |
| egypt | red sea governorate | hepatitis c virus | species | 20 | 0 |
| egypt | sharqia governorate | hepacivirus | genus | 0 | 2 |
| egypt | sharqia governorate | hepatitis c virus | species | 0 | 4 |
| egypt | sharqia governorate | west nile virus | species | 1 | 0 |
| egypt | sohag governorate | hepacivirus | genus | 0 | 1 |
| egypt | sohag governorate | hepatitis c virus | species | 0 | 1 |
| egypt | south sinai governorate | hepatitis c virus | species | 11 | 1 |
| egypt | suez governorate | hepacivirus | genus | 0 | 1 |
| egypt | suez governorate | hepatitis c virus | species | 6 | 2 |
| el salvador | | dengue virus | species | 2 | 0 |
| el salvador | | dengue virus 1 | no rank | 5 | 0 |
| el salvador | | dengue virus 2 | no rank | 5 | 0 |
| el salvador | | dengue virus 3 | no rank | 3 | 0 |
| el salvador | | dengue virus 4 | no rank | 5 | 0 |
| el salvador | | zika virus | species | 2 | 0 |
| el salvador | san salvador department | dengue virus | species | 0 | 2 |
| el salvador | san salvador department | dengue virus 2 | no rank | 0 | 1 |
| el salvador | san salvador department | west nile virus | species | 0 | 1 |
| equatorial guinea | | hepatitis c virus | species | 27 | 0 |
| equatorial guinea | | hepatitis c virus genotype 1 | no rank | 364 | 0 |
| eritrea | | dengue virus 1 | no rank | 2 | 0 |
| eritrea | | dengue virus 2 | no rank | 1 | 0 |
| eritrea | | gb virus c | species | 1 | 0 |
| eritrea | | hepatitis c virus | species | 17 | 0 |
| eritrea | northern red sea region | hepacivirus | genus | 0 | 1 |
| eritrea | northern red sea region | hepatitis c virus | species | 0 | 1 |
| estonia | | hepatitis c virus | species | 174 | 0 |
| estonia | | hepatitis c virus subtype 1b | no rank | 29 | 0 |
| estonia | | tick-borne encephalitis virus | species | 30 | 0 |
| estonia | harju county | hepacivirus | genus | 0 | 1 |
| estonia | harju county | hepatitis c virus | species | 0 | 3 |
| estonia | ida-viru county | classical swine fever virus | species | 0 | 1 |
| estonia | ida-viru county | tick-borne encephalitis virus | species | 4 | 0 |
| estonia | saare county | tick-borne encephalitis virus | species | 0 | 1 |
| estonia | tartu county | tick-borne encephalitis virus | species | 4 | 0 |
| estonia | valga county | tick-borne encephalitis virus | species | 1 | 0 |
| ethiopia | | dengue virus 3 | no rank | 2 | 0 |
| ethiopia | | hepatitis c virus | species | 134 | 0 |
| ethiopia | | rodent hepacivirus | species | 2 | 0 |
| ethiopia | | west nile virus | species | 1 | 0 |
| ethiopia | | yellow fever virus | species | 13 | 0 |
| ethiopia | addis ababa | hepacivirus | genus | 0 | 1 |
| ethiopia | addis ababa | hepatitis c virus | species | 0 | 4 |
| ethiopia | amhara region | hepatitis c virus | species | 0 | 1 |
| ethiopia | tigray region | hepatitis c virus | species | 0 | 1 |
| fiji | | dengue virus | species | 0 | 11 |
| fiji | | dengue virus 1 | no rank | 19 | 1 |
| fiji | | dengue virus 2 | no rank | 20 | 1 |
| fiji | | dengue virus 3 | no rank | 417 | 0 |
| fiji | | dengue virus 4 | no rank | 1 | 0 |
| fiji | | hepatitis c virus | species | 0 | 1 |
| fiji | | zika virus | species | 6 | 5 |
| finland | | alongshan virus | species | 8 | 0 |
| finland | | hanko virus | species | 2 | 0 |
| finland | | ilomantsi virus | species | 2 | 0 |
| finland | | lammi virus | species | 3 | 0 |
| finland | | lampyris noctiluca flavivirus 1 | species | 1 | 0 |
| finland | | tick-borne encephalitis virus | species | 85 | 0 |
| finland | north karelia region | usutu virus | species | 0 | 1 |
| finland | north karelia region | west nile virus | species | 0 | 1 |
| finland | southwest finland region | tick-borne encephalitis virus | species | 0 | 2 |
| finland | uusimaa region | hanko virus | species | 4 | 0 |
| france | | border disease virus | species | 57 | 0 |
| france | | border disease virus sheep/272/fra/2007 | no rank | 1 | 0 |
| france | | bovine viral diarrhea virus 1 | species | 64 | 0 |
| france | | bovine viral diarrhea virus 2 | no rank | 2 | 0 |
| france | | classical swine fever virus | species | 66 | 0 |
| france | | dengue virus 1 | no rank | 2 | 0 |
| france | | dengue virus 2 | no rank | 2 | 0 |
| france | | dengue virus 3 | no rank | 8 | 0 |
| france | | equine hepacivirus | species | 208 | 0 |
| france | | equine pegivirus | no rank | 8 | 0 |
| france | | gammarus pulex flavivirus | species | 1 | 0 |
| france | | gb virus c | species | 1 | 0 |
| france | | hepatitis c virus | species | 7616 | 0 |
| france | | hepatitis c virus genotype 2 | no rank | 40 | 0 |
| france | | hepatitis c virus genotype 4 | no rank | 50 | 0 |
| france | | hepatitis c virus genotype 5 | no rank | 11 | 0 |
| france | | hepatitis c virus strain m21-2k/1b | no rank | 1 | 0 |
| france | | hepatitis c virus subtype 1a | no rank | 77 | 0 |
| france | | hepatitis c virus subtype 1b | no rank | 1723 | 0 |
| france | | hepatitis c virus subtype 2a | no rank | 5 | 0 |
| france | | hepatitis c virus subtype 2b | no rank | 4 | 0 |
| france | | hepatitis c virus subtype 2c | no rank | 2 | 0 |
| france | | hepatitis c virus subtype 2i | no rank | 4 | 0 |
| france | | hepatitis c virus subtype 2j | no rank | 5 | 0 |
| france | | hepatitis c virus subtype 2k | no rank | 5 | 0 |
| france | | hepatitis c virus subtype 2l | no rank | 8 | 0 |
| france | | hepatitis c virus subtype 3a | no rank | 31 | 0 |
| france | | hepatitis c virus subtype 4a | no rank | 15 | 0 |
| france | | hepatitis c virus subtype 4d | no rank | 44 | 0 |
| france | | hepatitis c virus subtype 4f | no rank | 5 | 0 |
| france | | hepatitis c virus subtype 4h | no rank | 4 | 0 |
| france | | hepatitis c virus subtype 4k | no rank | 2 | 0 |
| france | | hepatitis c virus subtype 4n | no rank | 1 | 0 |
| france | | hepatitis c virus subtype 4r | no rank | 4 | 0 |
| france | | hepatitis c virus subtype 5a | no rank | 20 | 0 |
| france | | human pegivirus | no rank | 25 | 0 |
| france | | macrosiphum euphorbiae virus 1 | species | 2 | 0 |
| france | | meaban virus | species | 3 | 0 |
| france | | ovine pestivirus | species | 4 | 0 |
| france | | rodent hepacivirus | species | 18 | 0 |
| france | | tick-borne encephalitis virus | species | 1 | 0 |
| france | | usutu virus | species | 13 | 0 |
| france | | west nile virus | species | 10 | 0 |
| france | | yellow fever virus | species | 28 | 0 |
| france | | zika virus | species | 1 | 0 |
| france | alsace region | classical swine fever virus | species | 22 | 0 |
| france | alsace region | flavivirus | genus | 0 | 2 |
| france | alsace region | hepacivirus | genus | 0 | 2 |
| france | alsace region | hepatitis c virus | species | 1538 | 5 |
| france | alsace region | hepatitis c virus subtype 5a | no rank | 11 | 0 |
| france | alsace region | jingmen tick virus | no rank | 4 | 0 |
| france | alsace region | tick-borne encephalitis virus | species | 2 | 4 |
| france | aquitaine region | hepatitis c virus | species | 0 | 7 |
| france | aquitaine region | hepatitis c virus subtype 5a | no rank | 45029 | 0 |
| france | auvergne region | hepatitis c virus | species | 0 | 1 |
| france | auvergne region | hepatitis c virus subtype 5a | no rank | 1440 | 0 |
| france | basse-normandie region | hepacivirus | genus | 0 | 1 |
| france | basse-normandie region | hepatitis c virus | species | 0 | 1 |
| france | bretagne region | bovine viral diarrhea virus 1 | species | 0 | 4 |
| france | bretagne region | flavivirus | genus | 0 | 3 |
| france | bretagne region | hepatitis c virus subtype 5a | no rank | 8 | 0 |
| france | bretagne region | meaban virus | species | 0 | 1 |
| france | bretagne region | saumarez reef virus | species | 0 | 1 |
| france | bretagne region | tyuleniy virus | species | 0 | 2 |
| france | bretagne region | west nile virus | species | 0 | 1 |
| france | bretagne region | yellow fever virus | species | 0 | 1 |
| france | centre region | gb virus c | species | 0 | 1 |
| france | centre region | hepatitis c virus | species | 0 | 10 |
| france | centre region | hepatitis c virus subtype 5a | no rank | 5782 | 0 |
| france | centre region | zika virus | species | 0 | 1 |
| france | champagne-ardenne region | tick-borne encephalitis virus | species | 0 | 1 |
| france | corse region | classical swine fever virus | species | 0 | 1 |
| france | corse region | dengue virus | species | 0 | 2 |
| france | corse region | west nile virus | species | 0 | 1 |
| france | haute-normandie region | hepacivirus | genus | 0 | 1 |
| france | haute-normandie region | hepatitis c virus | species | 0 | 1 |
| france | haute-normandie region | hepatitis c virus subtype 5a | no rank | 16 | 0 |
| france | ile-de-france region | hepacivirus | genus | 0 | 11 |
| france | ile-de-france region | hepatitis c virus | species | 0 | 33 |
| france | ile-de-france region | hepatitis c virus genotype 1 | no rank | 2 | 0 |
| france | ile-de-france region | hepatitis c virus subtype 1a | no rank | 2 | 0 |
| france | ile-de-france region | hepatitis c virus subtype 1b | no rank | 2 | 0 |
| france | ile-de-france region | hepatitis c virus subtype 2c | no rank | 1 | 0 |
| france | ile-de-france region | hepatitis c virus subtype 3a | no rank | 38 | 0 |
| france | ile-de-france region | hepatitis c virus subtype 4a | no rank | 9 | 0 |
| france | ile-de-france region | hepatitis c virus subtype 4d | no rank | 11 | 0 |
| france | ile-de-france region | hepatitis c virus subtype 5a | no rank | 4127 | 0 |
| france | ile-de-france region | japanese encephalitis virus | species | 0 | 1 |
| france | ile-de-france region | yellow fever virus | species | 0 | 3 |
| france | languedoc-roussillon region | hepatitis c virus | species | 0 | 2 |
| france | limousin region | hepacivirus | genus | 0 | 1 |
| france | limousin region | hepatitis c virus | species | 0 | 2 |
| france | limousin region | hepatitis c virus subtype 5a | no rank | 8 | 0 |
| france | lorraine region | classical swine fever virus | species | 37 | 1 |
| france | lorraine region | flavivirus | genus | 0 | 1 |
| france | lorraine region | hepatitis c virus | species | 0 | 2 |
| france | lorraine region | tick-borne encephalitis virus | species | 0 | 2 |
| france | midi-pyrenees region | hepacivirus | genus | 0 | 2 |
| france | midi-pyrenees region | hepatitis c virus | species | 23 | 2 |
| france | midi-pyrenees region | hepatitis c virus genotype 5 | no rank | 0 | 1 |
| france | midi-pyrenees region | hepatitis c virus subtype 5a | no rank | 18 | 0 |
| france | nord-pas-de-calais region | hepacivirus | genus | 0 | 1 |
| france | nord-pas-de-calais region | hepatitis c virus | species | 0 | 3 |
| france | pays de la loire region | hepatitis c virus | species | 0 | 1 |
| france | pays de la loire region | hepatitis c virus subtype 5a | no rank | 42 | 0 |
| france | picardie region | hepatitis c virus | species | 0 | 1 |
| france | poitou-charentes region | hepatitis c virus | species | 0 | 4 |
| france | provence-alpes-cote d'azur region | border disease virus | species | 0 | 1 |
| france | provence-alpes-cote d'azur region | bovine viral diarrhea virus 1 | species | 0 | 1 |
| france | provence-alpes-cote d'azur region | dengue virus 1 | no rank | 1 | 0 |
| france | provence-alpes-cote d'azur region | hepacivirus | genus | 0 | 3 |
| france | provence-alpes-cote d'azur region | hepatitis c virus | species | 51 | 5 |
| france | provence-alpes-cote d'azur region | pestivirus | genus | 0 | 1 |
| france | rhone-alpes region | hepacivirus | genus | 0 | 2 |
| france | rhone-alpes region | hepatitis c virus | species | 0 | 10 |
| france | rhone-alpes region | hepatitis c virus subtype 5a | no rank | 24 | 0 |
| french guiana | | dengue virus 1 | no rank | 5 | 0 |
| french guiana | | dengue virus 2 | no rank | 20 | 0 |
| french guiana | | dengue virus 3 | no rank | 14 | 0 |
| french guiana | | dengue virus 4 | no rank | 11 | 0 |
| french guiana | | yellow fever virus | species | 1 | 0 |
| french guiana | | zika virus | species | 11 | 0 |
| french guiana | guyane | dengue virus | species | 0 | 2 |
| french polynesia | | dengue virus | species | 4 | 39 |
| french polynesia | | dengue virus 1 | no rank | 164 | 3 |
| french polynesia | | dengue virus 2 | no rank | 33 | 6 |
| french polynesia | | dengue virus 3 | no rank | 27 | 0 |
| french polynesia | | dengue virus 4 | no rank | 64 | 0 |
| french polynesia | | flavivirus | genus | 0 | 3 |
| french polynesia | | hepacivirus | genus | 0 | 2 |
| french polynesia | | hepatitis c virus | species | 0 | 4 |
| french polynesia | | japanese encephalitis virus | species | 0 | 1 |
| french polynesia | | st. louis encephalitis virus | species | 0 | 1 |
| french polynesia | | west nile virus | species | 0 | 7 |
| french polynesia | | zika virus | species | 25 | 0 |
| french polynesia | austral islands | dengue virus 1 | no rank | 3 | 0 |
| french polynesia | austral islands | dengue virus 3 | no rank | 2 | 0 |
| french polynesia | leeward islands | dengue virus 1 | no rank | 18 | 0 |
| french polynesia | leeward islands | dengue virus 2 | no rank | 1 | 0 |
| french polynesia | leeward islands | dengue virus 3 | no rank | 4 | 0 |
| french polynesia | leeward islands | dengue virus 4 | no rank | 14 | 0 |
| french polynesia | marquesas islands | dengue virus 1 | no rank | 3 | 0 |
| french polynesia | marquesas islands | dengue virus 2 | no rank | 1 | 0 |
| french polynesia | marquesas islands | dengue virus 3 | no rank | 2 | 0 |
| french polynesia | marquesas islands | dengue virus 4 | no rank | 2 | 0 |
| french polynesia | marquesas islands | zika virus | species | 1 | 0 |
| french polynesia | tuamotu-gambier islands | dengue virus 1 | no rank | 3 | 0 |
| french polynesia | windward islands | dengue virus 1 | no rank | 51 | 0 |
| french polynesia | windward islands | dengue virus 2 | no rank | 13 | 0 |
| french polynesia | windward islands | dengue virus 3 | no rank | 18 | 0 |
| french polynesia | windward islands | dengue virus 4 | no rank | 40 | 0 |
| gabon | | bat flavivirus belinga gb09 219 | species | 1 | 0 |
| gabon | | bat flavivirus belinga gb09 934 | species | 1 | 0 |
| gabon | | bat gb virus jfd/gabon/2005 | species | 10 | 0 |
| gabon | | bat gb-like virus jfd-2011 | species | 6 | 0 |
| gabon | | bat pegivirus | no rank | 3 | 0 |
| gabon | | dengue virus 1 | no rank | 3 | 0 |
| gabon | | dengue virus 2 | no rank | 8 | 0 |
| gabon | | dengue virus 3 | no rank | 1 | 0 |
| gabon | | hepatitis c virus | species | 311 | 0 |
| gabon | | hepatitis c virus genotype 4 | no rank | 1 | 0 |
| gabon | | hepatitis c virus subtype 4f | no rank | 1 | 0 |
| gabon | | zika virus | species | 2 | 0 |
| gabon | estuaire province | dengue virus | species | 0 | 1 |
| gabon | estuaire province | west nile virus | species | 0 | 1 |
| gabon | haut-ogooue province | dengue virus | species | 0 | 1 |
| gabon | haut-ogooue province | yellow fever virus | species | 0 | 1 |
| gabon | haut-ogooue province | zika virus | species | 0 | 1 |
| gabon | moyen-ogooue province | dengue virus 1 | no rank | 2 | 0 |
| gabon | moyen-ogooue province | dengue virus 3 | no rank | 10 | 0 |
| gabon | ogooue-ivindo province | hepatitis c virus | species | 15 | 0 |
| gabon | ogooue-lolo province | dengue virus | species | 0 | 1 |
| gabon | ogooue-lolo province | hepatitis c virus | species | 93 | 0 |
| gambia | | dengue virus 1 | no rank | 1 | 0 |
| gambia | | hepatitis c virus | species | 3 | 0 |
| gambia | | simian pegivirus | no rank | 3 | 0 |
| gambia | | yellow fever virus | species | 2 | 0 |
| georgia | | hepatitis c virus | species | 142 | 0 |
| germany | | atypical porcine pestivirus | no rank | 7 | 0 |
| germany | | atypical porcine pestivirus 1 | species | 4 | 0 |
| germany | | border disease virus | species | 12 | 0 |
| germany | | bovine hepacivirus | species | 25 | 0 |
| germany | | bovine viral diarrhea virus 1 | species | 43 | 0 |
| germany | | bovine viral diarrhea virus 2 | no rank | 7 | 0 |
| germany | | classical swine fever virus | species | 18 | 0 |
| germany | | crangon crangon flavivirus | species | 1 | 0 |
| germany | | dengue virus 1 | no rank | 1 | 0 |
| germany | | equine hepacivirus | species | 20 | 0 |
| germany | | equine pegivirus 1 | no rank | 1 | 0 |
| germany | | gb virus c | species | 171 | 0 |
| germany | | hepacivirus j | species | 2 | 0 |
| germany | | hepacivirus n | species | 2 | 0 |
| germany | | hepatitis c virus | species | 2468 | 0 |
| germany | | hepatitis c virus subtype 1a | no rank | 25 | 0 |
| germany | | hepatitis c virus subtype 1b | no rank | 154 | 0 |
| germany | | hepatitis c virus subtype 3a | no rank | 111 | 0 |
| germany | | jingmen tick virus | no rank | 4 | 0 |
| germany | | non-primate hepacivirus | species | 27 | 0 |
| germany | | pegivirus k | species | 8 | 0 |
| germany | | porcine pegivirus | species | 4 | 0 |
| germany | | porcine pestivirus 1 | species | 20 | 0 |
| germany | | rodent hepacivirus | species | 16 | 0 |
| germany | | tick-borne encephalitis virus | species | 37 | 0 |
| germany | | usutu virus | species | 144 | 0 |
| germany | | west nile virus | species | 32 | 0 |
| germany | | yellow fever virus | species | 1 | 0 |
| germany | | zika virus | species | 2 | 0 |
| germany | baden-wuerttemberg | bovine viral diarrhea virus 2 | no rank | 1 | 0 |
| germany | baden-wuerttemberg | classical swine fever virus | species | 1 | 0 |
| germany | baden-wuerttemberg | hepatitis c virus subtype 1a | no rank | 3 | 0 |
| germany | baden-wuerttemberg | tick-borne encephalitis virus | species | 3 | 5 |
| germany | baden-wuerttemberg | usutu virus | species | 1 | 0 |
| germany | bavaria | bovine viral diarrhea virus 1 | species | 0 | 1 |
| germany | bavaria | gb virus c | species | 0 | 1 |
| germany | bavaria | hepatitis c virus | species | 0 | 3 |
| germany | bavaria | japanese encephalitis virus | species | 0 | 1 |
| germany | bavaria | tick-borne encephalitis virus | species | 41 | 16 |
| germany | bavaria | usutu virus | species | 67 | 0 |
| germany | berlin | dengue virus | species | 0 | 1 |
| germany | berlin | flavivirus | genus | 0 | 1 |
| germany | berlin | hepacivirus | genus | 0 | 3 |
| germany | berlin | hepatitis c virus | species | 0 | 10 |
| germany | berlin | tick-borne encephalitis virus | species | 0 | 1 |
| germany | berlin | usutu virus | species | 2 | 1 |
| germany | brandenburg | bovine viral diarrhea virus 1 | species | 0 | 1 |
| germany | brandenburg | bovine viral diarrhea virus 2 | no rank | 1 | 0 |
| germany | brandenburg | classical swine fever virus | species | 0 | 5 |
| germany | brandenburg | hepatitis c virus | species | 0 | 1 |
| germany | brandenburg | tick-borne encephalitis virus | species | 0 | 2 |
| germany | brandenburg | west nile virus | species | 0 | 2 |
| germany | bremen | hepatitis c virus | species | 0 | 1 |
| germany | hamburg | hepacivirus | genus | 0 | 2 |
| germany | hamburg | hepatitis c virus | species | 0 | 5 |
| germany | hesse | hepatitis c virus | species | 5 | 0 |
| germany | hesse | tick-borne encephalitis virus | species | 0 | 8 |
| germany | hesse | usutu virus | species | 1 | 0 |
| germany | hesse | west nile virus | species | 0 | 1 |
| germany | lower saxony | atypical porcine pestivirus 1 | species | 12 | 0 |
| germany | lower saxony | bovine viral diarrhea virus 1 | species | 0 | 4 |
| germany | lower saxony | bovine viral diarrhea virus 104/98 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus 10846/91 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus 1103/88 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus 11207/98 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus 128/88 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus 16484/93 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus 1891/99 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus 2 | no rank | 0 | 1 |
| germany | lower saxony | bovine viral diarrhea virus 2204/82 | no rank | 2 | 0 |
| germany | lower saxony | bovine viral diarrhea virus 22146/81 | no rank | 2 | 0 |
| germany | lower saxony | bovine viral diarrhea virus 2900/83 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus 3596/86 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus 4998/89 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus 5551/84 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus 9466/91 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus lamspringe/735 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus lamspringe/738 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 104/98 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 10846/91 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 1103/88 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 11158/98 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 11202/98 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 11203/98 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 11205/98 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 11207/98 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 11253/98 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 11255/98 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 11336/98 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 11337/98 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 11357/98 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 11358/98 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 11359/98 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 11360/98 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 11361/98 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 11362/98 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 128/88 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 151/95 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 152/95 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 16484/93 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 17004/85 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 1891/99 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 2037/93 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 2204/82 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 22146/81 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 223/00 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 2324/94 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 2336/85 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 2543/87 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 2583/86 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 2823/87 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 2900/83 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 3185/83 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 3187/83 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 3206/83 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 3208/83 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 321/80 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 3596/86 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 3833/84 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 4315/84 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 4998/89 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 5059/89 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 5190/89 | no rank | 2 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 5551/84 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 5586/84 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 5769/84 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 5862/94 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 638/87 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 6533/90 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 710/80 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 712/80 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 715/80 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 7331/92 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 7417/90 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 9368/92 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain 9466/91 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain lamspringe/735 | no rank | 1 | 0 |
| germany | lower saxony | bovine viral diarrhea virus strain lamspringe/738 | no rank | 1 | 0 |
| germany | lower saxony | classical swine fever virus | species | 0 | 6 |
| germany | lower saxony | hepacivirus | genus | 0 | 2 |
| germany | lower saxony | hepatitis c virus | species | 17 | 6 |
| germany | lower saxony | pestivirus | genus | 0 | 2 |
| germany | lower saxony | tick-borne encephalitis virus | species | 398 | 1 |
| germany | lower saxony | usutu virus | species | 2 | 0 |
| germany | mecklenburg-vorpommern | classical swine fever virus | species | 59837 | 1 |
| germany | mecklenburg-vorpommern | tick-borne encephalitis virus | species | 0 | 5 |
| germany | mecklenburg-vorpommern | usutu virus | species | 6 | 0 |
| germany | north rhine-westphalia | atypical porcine pestivirus 1 | species | 1 | 0 |
| germany | north rhine-westphalia | bovine viral diarrhea virus 2 | no rank | 12 | 0 |
| germany | north rhine-westphalia | dengue virus | species | 0 | 1 |
| germany | north rhine-westphalia | gb virus c | species | 0 | 1 |
| germany | north rhine-westphalia | hepacivirus | genus | 0 | 1 |
| germany | north rhine-westphalia | hepatitis c virus | species | 0 | 2 |
| germany | north rhine-westphalia | japanese encephalitis virus | species | 0 | 2 |
| germany | north rhine-westphalia | tick-borne encephalitis virus | species | 1 | 1 |
| germany | north rhine-westphalia | usutu virus | species | 1 | 0 |
| germany | north rhine-westphalia | west nile virus | species | 0 | 1 |
| germany | rhineland-palatinate | bovine viral diarrhea virus 1 | species | 0 | 1 |
| germany | rhineland-palatinate | classical swine fever virus | species | 0 | 3 |
| germany | rhineland-palatinate | japanese encephalitis virus | species | 0 | 1 |
| germany | rhineland-palatinate | pestivirus | genus | 0 | 1 |
| germany | rhineland-palatinate | tick-borne encephalitis virus | species | 0 | 6 |
| germany | rhineland-palatinate | west nile virus | species | 0 | 1 |
| germany | saarland | tick-borne encephalitis virus | species | 0 | 6 |
| germany | saxony | border disease virus | species | 0 | 1 |
| germany | saxony | bovine viral diarrhea virus 1 | species | 0 | 6 |
| germany | saxony | bovine viral diarrhea virus 2 | no rank | 0 | 1 |
| germany | saxony | classical swine fever virus | species | 0 | 6 |
| germany | saxony | hepatitis c virus | species | 0 | 5 |
| germany | saxony | pestivirus | genus | 0 | 2 |
| germany | saxony | tick-borne encephalitis virus | species | 0 | 6 |
| germany | saxony | usutu virus | species | 33 | 0 |
| germany | saxony | west nile virus | species | 0 | 1 |
| germany | saxony-anhalt | atypical porcine pestivirus 1 | species | 1 | 0 |
| germany | saxony-anhalt | bovine viral diarrhea virus 1 | species | 0 | 2 |
| germany | saxony-anhalt | classical swine fever virus | species | 0 | 3 |
| germany | saxony-anhalt | hepatitis c virus | species | 0 | 2 |
| germany | saxony-anhalt | tick-borne encephalitis virus | species | 0 | 1 |
| germany | saxony-anhalt | usutu virus | species | 3 | 0 |
| germany | schleswig-holstein | bovine viral diarrhea virus 1 | species | 0 | 1 |
| germany | schleswig-holstein | bovine viral diarrhea virus 2 | no rank | 3 | 0 |
| germany | schleswig-holstein | classical swine fever virus | species | 0 | 1 |
| germany | schleswig-holstein | pestivirus | genus | 0 | 1 |
| germany | schleswig-holstein | tick-borne encephalitis virus | species | 0 | 2 |
| germany | schleswig-holstein | usutu virus | species | 1 | 0 |
| germany | thuringen | hepatitis c virus | species | 0 | 1 |
| germany | thuringen | tick-borne encephalitis virus | species | 0 | 7 |
| ghana | | bat gb-like virus jfd-2011 | species | 37 | 0 |
| ghana | | bovine hepacivirus | species | 10 | 0 |
| ghana | | dengue virus 2 | no rank | 4 | 0 |
| ghana | | dengue virus 3 | no rank | 5 | 0 |
| ghana | | gb virus c | species | 8 | 0 |
| ghana | | hepatitis c virus | species | 121 | 0 |
| ghana | | hepatitis c virus genotype 2 | no rank | 2 | 0 |
| ghana | | hepatitis c virus genotype 4 | no rank | 4 | 0 |
| ghana | | human pegivirus | no rank | 26 | 0 |
| ghana | | yaounde-like virus ave-ghana/2007 | species | 1 | 0 |
| ghana | | yellow fever virus | species | 1 | 0 |
| ghana | ashanti region | hepacivirus | genus | 0 | 3 |
| ghana | ashanti region | hepatitis c virus | species | 0 | 5 |
| ghana | ashanti region | west nile virus | species | 0 | 1 |
| ghana | ashanti region | yellow fever virus | species | 0 | 1 |
| ghana | central region | hepatitis c virus | species | 0 | 1 |
| ghana | central region | yellow fever virus group | subgenus | 0 | 1 |
| ghana | greater accra region | cell fusing agent virus | species | 1 | 0 |
| ghana | greater accra region | dengue virus 2 | no rank | 2 | 0 |
| ghana | greater accra region | hepatitis c virus | species | 0 | 2 |
| ghana | greater accra region | hepatitis c virus genotype 2 | no rank | 4 | 0 |
| ghana | northern region | hepatitis c virus | species | 0 | 1 |
| ghana | northern region | yellow fever virus group | subgenus | 0 | 1 |
| ghana | upper west region | hepatitis c virus | species | 6 | 0 |
| ghana | western region | hepatitis c virus | species | 0 | 1 |
| ghana | western region | yellow fever virus | species | 0 | 1 |
| greece | | greek goat encephalitis virus | species | 3 | 1 |
| greece | | hepatitis c virus | species | 170 | 0 |
| greece | | louping ill virus | species | 1 | 0 |
| greece | | ochlerotatus caspius flavivirus | species | 9 | 0 |
| greece | | west nile virus | species | 77 | 4 |
| greece | attica region | dengue virus | species | 0 | 1 |
| greece | attica region | gb virus c | species | 0 | 1 |
| greece | attica region | hepacivirus | genus | 0 | 4 |
| greece | attica region | hepatitis c virus | species | 0 | 12 |
| greece | attica region | japanese encephalitis virus | species | 0 | 1 |
| greece | attica region | west nile virus | species | 14 | 3 |
| greece | central greece region | hepacivirus | genus | 0 | 1 |
| greece | central greece region | hepatitis c virus | species | 0 | 5 |
| greece | central greece region | japanese encephalitis virus | species | 0 | 1 |
| greece | central greece region | west nile virus | species | 5 | 2 |
| greece | central macedonia region | flavivirus | genus | 0 | 1 |
| greece | central macedonia region | hepatitis c virus | species | 0 | 1 |
| greece | central macedonia region | japanese encephalitis virus | species | 0 | 1 |
| greece | central macedonia region | mosquito flavivirus | no rank | 2 | 0 |
| greece | central macedonia region | usutu virus | species | 0 | 2 |
| greece | central macedonia region | west nile virus | species | 21 | 16 |
| greece | crete region | hepacivirus | genus | 0 | 1 |
| greece | crete region | hepatitis c virus | species | 0 | 10 |
| greece | crete region | west nile virus | species | 2 | 0 |
| greece | east macedonia and thrace region | west nile virus | species | 133 | 0 |
| greece | epirus region | hepatitis c virus | species | 0 | 1 |
| greece | peloponnese region | west nile virus | species | 3 | 0 |
| greece | thessaly region | hepatitis c virus | species | 0 | 1 |
| greece | thessaly region | japanese encephalitis virus | species | 0 | 1 |
| greece | thessaly region | west nile virus | species | 4 | 2 |
| greece | west greece region | dengue virus | species | 0 | 1 |
| greece | west greece region | hepatitis c virus | species | 0 | 2 |
| greece | west greece region | west nile virus | species | 1 | 2 |
| grenada | | dengue virus | species | 0 | 2 |
| grenada | | dengue virus 1 | no rank | 13 | 0 |
| grenada | | dengue virus 2 | no rank | 4 | 0 |
| grenada | | dengue virus 3 | no rank | 6 | 0 |
| grenada | | zika virus | species | 1 | 0 |
| guadeloupe | | cell fusing agent virus | species | 16 | 0 |
| guadeloupe | | dengue virus | species | 0 | 14 |
| guadeloupe | | dengue virus 1 | no rank | 1 | 0 |
| guadeloupe | | dengue virus 2 | no rank | 2 | 0 |
| guadeloupe | | dengue virus 4 | no rank | 3 | 0 |
| guadeloupe | | west nile virus | species | 0 | 4 |
| guadeloupe | | zika virus | species | 7 | 6 |
| guadeloupe | guadeloupe | dengue virus | species | 0 | 1 |
| guadeloupe | guadeloupe | west nile virus | species | 0 | 5 |
| guadeloupe | guadeloupe | zika virus | species | 0 | 1 |
| guam | | dengue virus | species | 0 | 1 |
| guam | | dengue virus 2 | no rank | 2 | 0 |
| guam | | hepatitis c virus | species | 0 | 1 |
| guatemala | | bat pegivirus | no rank | 5 | 0 |
| guatemala | | classical swine fever virus | species | 2 | 0 |
| guatemala | | culex flavivirus | species | 2 | 0 |
| guatemala | | dengue virus 1 | no rank | 1 | 0 |
| guatemala | | dengue virus 2 | no rank | 6 | 0 |
| guatemala | | dengue virus 3 | no rank | 1 | 0 |
| guatemala | | jutiapa virus | species | 3 | 0 |
| guatemala | | pegivirus f | species | 1 | 0 |
| guatemala | | pegivirus i | species | 1 | 0 |
| guatemala | | st. louis encephalitis virus | species | 4 | 0 |
| guatemala | | zika virus | species | 6 | 0 |
| guatemala | guatemala department | dengue virus | species | 0 | 5 |
| guatemala | guatemala department | dengue virus 2 | no rank | 1 | 1 |
| guatemala | guatemala department | flavivirus | genus | 0 | 2 |
| guatemala | guatemala department | ilheus virus | species | 0 | 1 |
| guatemala | guatemala department | japanese encephalitis virus | species | 0 | 2 |
| guatemala | guatemala department | kamiti river virus | species | 0 | 1 |
| guatemala | guatemala department | ngoye virus | species | 0 | 1 |
| guatemala | guatemala department | quang binh virus | species | 0 | 1 |
| guatemala | guatemala department | st. louis encephalitis virus | species | 0 | 3 |
| guatemala | guatemala department | west nile virus | species | 0 | 4 |
| guatemala | izabal department | culex flavivirus | species | 0 | 2 |
| guatemala | izabal department | flavivirus | genus | 0 | 2 |
| guatemala | izabal department | japanese encephalitis virus | species | 0 | 1 |
| guatemala | izabal department | kamiti river virus | species | 0 | 1 |
| guatemala | izabal department | ngoye virus | species | 0 | 1 |
| guatemala | izabal department | quang binh virus | species | 0 | 1 |
| guatemala | izabal department | west nile virus | species | 0 | 2 |
| guinea | | dengue virus 2 | no rank | 1 | 0 |
| guinea | | hepatitis c virus | species | 3 | 0 |
| guinea | | zika virus | species | 1 | 0 |
| guinea | conakry region | hepacivirus | genus | 0 | 1 |
| guinea | conakry region | hepatitis c virus | species | 0 | 1 |
| guinea | faranah region | zika virus | species | 1 | 0 |
| guinea | kindia region | dengue virus | species | 0 | 1 |
| guinea | kindia region | hepacivirus | genus | 0 | 1 |
| guinea | kindia region | hepatitis c virus | species | 0 | 1 |
| guinea | mamou region | yellow fever virus | species | 114 | 0 |
| guinea-bissau | | hepatitis c virus genotype 2 | no rank | 56 | 0 |
| guinea-bissau | | yellow fever virus | species | 2 | 0 |
| guinea-bissau | biombo region | hepacivirus | genus | 0 | 1 |
| guinea-bissau | biombo region | hepatitis c virus | species | 0 | 1 |
| guinea-bissau | bissau region | dengue virus | species | 0 | 1 |
| guinea-bissau | bissau region | dengue virus 2 | no rank | 0 | 1 |
| guinea-bissau | bissau region | hepacivirus | genus | 0 | 2 |
| guinea-bissau | bissau region | hepatitis c virus | species | 0 | 2 |
| guinea-bissau | bissau region | yellow fever virus | species | 0 | 1 |
| guinea-bissau | cacheu region | hepacivirus | genus | 0 | 1 |
| guinea-bissau | cacheu region | hepatitis c virus | species | 0 | 1 |
| guyana | | dengue virus | species | 1 | 0 |
| guyana | | dengue virus 1 | no rank | 2 | 0 |
| guyana | | dengue virus 2 | no rank | 3 | 0 |
| guyana | | dengue virus 3 | no rank | 1 | 0 |
| guyana | | hepatitis c virus | species | 2 | 0 |
| guyana | | zika virus | species | 1 | 0 |
| guyana | demerara-mahaica region | dengue virus | species | 0 | 1 |
| haiti | | dengue virus | species | 0 | 8 |
| haiti | | dengue virus 1 | no rank | 8 | 0 |
| haiti | | dengue virus 2 | no rank | 4 | 1 |
| haiti | | dengue virus 4 | no rank | 4 | 0 |
| haiti | | hepacivirus | genus | 0 | 1 |
| haiti | | spondweni virus | species | 1 | 0 |
| haiti | | st. louis encephalitis virus | species | 2 | 0 |
| haiti | | west nile virus | species | 0 | 1 |
| haiti | | zika virus | species | 26 | 0 |
| haiti | centre department | dengue virus | species | 0 | 1 |
| haiti | centre department | zika virus | species | 0 | 1 |
| haiti | l'artibonite department | classical swine fever virus | species | 0 | 1 |
| haiti | sud department | dengue virus | species | 0 | 1 |
| haiti | sud department | west nile virus | species | 0 | 1 |
| haiti | sud-est department | dengue virus | species | 0 | 1 |
| haiti | sud-est department | west nile virus | species | 0 | 1 |
| honduras | | classical swine fever virus | species | 3 | 0 |
| honduras | | dengue virus | species | 2 | 0 |
| honduras | | dengue virus 1 | no rank | 5 | 0 |
| honduras | | dengue virus 2 | no rank | 29 | 0 |
| honduras | | dengue virus 3 | no rank | 20 | 0 |
| honduras | | dengue virus 4 | no rank | 2 | 0 |
| honduras | | zika virus | species | 16 | 0 |
| honduras | cortes department | zika virus | species | 8 | 0 |
| honduras | francisco morazan department | dengue virus | species | 0 | 3 |
| honduras | francisco morazan department | zika virus | species | 25 | 0 |
| honduras | olancho department | st. louis encephalitis virus | species | 0 | 1 |
| honduras | olancho department | west nile virus | species | 0 | 1 |
| hong kong | | classical swine fever virus | species | 5 | 0 |
| hong kong | | dengue virus | species | 0 | 11 |
| hong kong | | dengue virus 1 | no rank | 0 | 1 |
| hong kong | | equine hepacivirus | species | 0 | 1 |
| hong kong | | equine pegivirus | no rank | 0 | 1 |
| hong kong | | gb virus c | species | 0 | 1 |
| hong kong | | hepacivirus | genus | 0 | 17 |
| hong kong | | hepatitis c virus | species | 8 | 48 |
| hong kong | | hepatitis c virus (isolate 6a33) | no rank | 1 | 0 |
| hong kong | | hepatitis c virus subtype 1b | no rank | 168 | 0 |
| hong kong | | hepatitis c virus subtype 2a | no rank | 3 | 0 |
| hong kong | | hepatitis c virus subtype 3a | no rank | 13 | 0 |
| hong kong | | hepatitis c virus subtype 3b | no rank | 5 | 0 |
| hong kong | | hepatitis c virus subtype 6a | no rank | 167 | 0 |
| hong kong | | hepatitis c virus subtype 6e | no rank | 1 | 0 |
| hong kong | | hepatitis c virus subtype 6g | no rank | 1 | 0 |
| hong kong | | hepatitis c virus subtype 6h | no rank | 1 | 0 |
| hong kong | | japanese encephalitis virus | species | 1 | 5 |
| hong kong | | pegivirus sp. | species | 1 | 0 |
| hong kong | | theiler's disease-associated virus | no rank | 0 | 1 |
| hong kong | | west nile virus | species | 0 | 1 |
| hong kong | | zika virus | species | 0 | 1 |
| hungary | | anopheles hyrcanus flavivirus | species | 1 | 0 |
| hungary | | bovine viral diarrhea virus strain 3142 | no rank | 1 | 0 |
| hungary | | bovine viral diarrhea virus strain 3887 | no rank | 1 | 0 |
| hungary | | bovine viral diarrhea virus vedevac | no rank | 1 | 0 |
| hungary | | classical swine fever virus | species | 1 | 0 |
| hungary | | dengue virus 2 | no rank | 3 | 0 |
| hungary | | gb virus c | species | 9 | 0 |
| hungary | | hepacivirus horse/dh1/hun/2013 | species | 1 | 0 |
| hungary | | hepatitis c virus | species | 77 | 0 |
| hungary | | hepatitis c virus genotype 3 | no rank | 1 | 0 |
| hungary | | hepatitis c virus genotype 4 | no rank | 1 | 0 |
| hungary | | hepatitis c virus subtype 1b | no rank | 22 | 0 |
| hungary | | tick-borne encephalitis virus | species | 9 | 0 |
| hungary | | usutu virus | species | 2 | 1 |
| hungary | | west nile virus | species | 49 | 1 |
| hungary | | zika virus | species | 2 | 0 |
| hungary | bacs-kiskun county | usutu virus | species | 9 | 0 |
| hungary | baranya county | atypical porcine pestivirus | no rank | 409 | 0 |
| hungary | baranya county | hepacivirus | genus | 0 | 1 |
| hungary | baranya county | hepatitis c virus | species | 0 | 1 |
| hungary | bekes county | atypical porcine pestivirus | no rank | 260 | 0 |
| hungary | budapest | classical swine fever virus | species | 18 | 0 |
| hungary | budapest | flavivirus | genus | 0 | 1 |
| hungary | budapest | hepacivirus | genus | 0 | 1 |
| hungary | budapest | hepatitis c virus | species | 0 | 8 |
| hungary | budapest | japanese encephalitis virus | species | 0 | 2 |
| hungary | budapest | usutu virus | species | 2 | 2 |
| hungary | budapest | west nile virus | species | 0 | 2 |
| hungary | hajdu-bihar county | hepatitis c virus | species | 0 | 1 |
| hungary | pest county | usutu virus | species | 3 | 0 |
| hungary | pest county | west nile virus | species | 1 | 0 |
| hungary | veszprem county | atypical porcine pestivirus | no rank | 13 | 0 |
| iceland | | dengue virus | species | 2 | 0 |
| iceland | capital region | hepacivirus | genus | 0 | 1 |
| india | | bagaza virus | species | 1 | 0 |
| india | | border disease virus | species | 1 | 0 |
| india | | bovine viral diarrhea virus 1 | species | 73 | 0 |
| india | | bovine viral diarrhea virus 1 ind s1226 | no rank | 1 | 0 |
| india | | bovine viral diarrhea virus 1 ind s1449 | no rank | 1 | 0 |
| india | | bovine viral diarrhea virus 1 ind s1456 | no rank | 1 | 0 |
| india | | bovine viral diarrhea virus 1-osloss | no rank | 1 | 0 |
| india | | bovine viral diarrhea virus 2 | no rank | 11 | 0 |
| india | | bovine viral diarrhea virus 3 | species | 40 | 0 |
| india | | classical swine fever virus | species | 479 | 0 |
| india | | dengue virus | species | 640 | 12 |
| india | | dengue virus 1 | no rank | 640 | 0 |
| india | | dengue virus 2 | no rank | 839 | 0 |
| india | | dengue virus 3 | no rank | 789 | 2 |
| india | | dengue virus 4 | no rank | 199 | 0 |
| india | | flavivirus sp. | species | 1 | 0 |
| india | | gb virus c | species | 18 | 0 |
| india | | hepatitis c virus | species | 3889 | 0 |
| india | | hepatitis c virus (isolate india) | no rank | 1 | 0 |
| india | | hepatitis c virus genotype 1 | no rank | 24 | 0 |
| india | | hepatitis c virus genotype 3 | no rank | 47 | 0 |
| india | | hepatitis c virus subtype 1a | no rank | 14 | 0 |
| india | | hepatitis c virus subtype 1b | no rank | 11 | 0 |
| india | | hepatitis c virus subtype 1c | no rank | 1 | 0 |
| india | | hepatitis c virus subtype 2a | no rank | 1 | 0 |
| india | | hepatitis c virus subtype 3a | no rank | 166 | 0 |
| india | | hepatitis c virus subtype 3b | no rank | 36 | 0 |
| india | | hepatitis c virus subtype 3e | no rank | 2 | 0 |
| india | | hepatitis c virus subtype 3g | no rank | 14 | 0 |
| india | | hepatitis c virus subtype 6a | no rank | 1 | 0 |
| india | | hepatitis c virus subtype 6h | no rank | 7 | 0 |
| india | | hepatitis c virus subtype 6k | no rank | 3 | 0 |
| india | | japanese encephalitis virus | species | 221 | 32 |
| india | | kyasanur forest disease virus | species | 19 | 1 |
| india | | pestivirus c | species | 4 | 0 |
| india | | pestivirus h | species | 18 | 0 |
| india | | west nile virus | species | 113 | 6 |
| india | | zika virus | species | 8 | 0 |
| india | andaman and nicobar islands | classical swine fever virus | species | 2 | 0 |
| india | andaman and nicobar islands | dengue virus | species | 0 | 9 |
| india | andaman and nicobar islands | dengue virus 3 | no rank | 8 | 0 |
| india | andaman and nicobar islands | japanese encephalitis virus | species | 0 | 1 |
| india | andhra pradesh | classical swine fever virus | species | 2 | 0 |
| india | andhra pradesh | dengue virus | species | 0 | 12 |
| india | andhra pradesh | dengue virus 1 | no rank | 91 | 0 |
| india | andhra pradesh | dengue virus 2 | no rank | 169 | 0 |
| india | andhra pradesh | dengue virus 3 | no rank | 71 | 0 |
| india | andhra pradesh | dengue virus 4 | no rank | 78 | 1 |
| india | andhra pradesh | flavivirus | genus | 0 | 2 |
| india | andhra pradesh | hepacivirus | genus | 0 | 1 |
| india | andhra pradesh | hepatitis c virus | species | 0 | 2 |
| india | andhra pradesh | japanese encephalitis virus | species | 1 | 17 |
| india | andhra pradesh | west nile virus | species | 0 | 2 |
| india | arunachal pradesh | bovine viral diarrhea virus 1 | species | 0 | 1 |
| india | arunachal pradesh | classical swine fever virus | species | 3 | 1 |
| india | arunachal pradesh | dengue virus | species | 14 | 3 |
| india | arunachal pradesh | hepacivirus | genus | 0 | 1 |
| india | arunachal pradesh | hepatitis c virus | species | 0 | 1 |
| india | arunachal pradesh | japanese encephalitis virus | species | 0 | 2 |
| india | assam | classical swine fever virus | species | 74 | 2 |
| india | assam | dengue virus | species | 0 | 12 |
| india | assam | dengue virus 1 | no rank | 20 | 0 |
| india | assam | dengue virus 2 | no rank | 19 | 1 |
| india | assam | dengue virus 3 | no rank | 1 | 0 |
| india | assam | flavivirus | genus | 0 | 1 |
| india | assam | hepatitis c virus | species | 29 | 2 |
| india | assam | japanese encephalitis virus | species | 16 | 30 |
| india | assam | palm creek virus | species | 0 | 1 |
| india | assam | west nile virus | species | 3 | 4 |
| india | bihar | dengue virus | species | 0 | 2 |
| india | bihar | hepacivirus | genus | 0 | 1 |
| india | bihar | hepatitis c virus | species | 0 | 2 |
| india | bihar | japanese encephalitis virus | species | 0 | 7 |
| india | bihar | west nile virus | species | 0 | 1 |
| india | chandigarh | dengue virus | species | 0 | 1 |
| india | chandigarh | hepatitis c virus | species | 0 | 1 |
| india | chandigarh | japanese encephalitis virus | species | 0 | 4 |
| india | chandigarh | west nile virus | species | 0 | 1 |
| india | chhattisgarh | dengue virus | species | 0 | 1 |
| india | chhattisgarh | dengue virus 1 | no rank | 0 | 1 |
| india | goa | dengue virus | species | 0 | 3 |
| india | goa | japanese encephalitis virus | species | 1 | 7 |
| india | goa | west nile virus | species | 0 | 1 |
| india | gujarat | dengue virus | species | 0 | 5 |
| india | gujarat | hepacivirus | genus | 0 | 1 |
| india | gujarat | hepatitis c virus | species | 0 | 1 |
| india | gujarat | japanese encephalitis virus | species | 0 | 2 |
| india | gujarat | west nile virus | species | 0 | 2 |
| india | haryana | classical swine fever virus | species | 469 | 0 |
| india | haryana | dengue virus | species | 0 | 7 |
| india | haryana | dengue virus 2 | no rank | 4 | 0 |
| india | haryana | hepacivirus | genus | 0 | 1 |
| india | haryana | japanese encephalitis virus | species | 0 | 11 |
| india | haryana | murray valley encephalitis virus | species | 0 | 1 |
| india | haryana | west nile virus | species | 0 | 1 |
| india | himachal pradesh | dengue virus | species | 0 | 3 |
| india | himachal pradesh | dengue virus 1 | no rank | 2 | 0 |
| india | himachal pradesh | hepatitis c virus | species | 0 | 1 |
| india | himachal pradesh | japanese encephalitis virus | species | 0 | 1 |
| india | jammu and kashmir | dengue virus | species | 0 | 2 |
| india | jammu and kashmir | dengue virus 2 | no rank | 1 | 0 |
| india | jammu and kashmir | hepatitis c virus | species | 0 | 1 |
| india | jammu and kashmir | japanese encephalitis virus | species | 0 | 1 |
| india | jharkhand | dengue virus | species | 0 | 3 |
| india | jharkhand | japanese encephalitis virus | species | 0 | 3 |
| india | jharkhand | west nile virus | species | 0 | 1 |
| india | karnataka | classical swine fever virus | species | 5 | 0 |
| india | karnataka | dengue virus | species | 0 | 14 |
| india | karnataka | dengue virus 1 | no rank | 11 | 0 |
| india | karnataka | dengue virus 2 | no rank | 27 | 1 |
| india | karnataka | dengue virus 3 | no rank | 15 | 0 |
| india | karnataka | dengue virus 4 | no rank | 105 | 0 |
| india | karnataka | flavivirus | genus | 0 | 2 |
| india | karnataka | hepatitis c virus | species | 0 | 1 |
| india | karnataka | japanese encephalitis virus | species | 14 | 28 |
| india | karnataka | kyasanur forest disease virus | species | 31 | 6 |
| india | karnataka | langat virus | species | 0 | 1 |
| india | karnataka | louping ill virus | species | 0 | 1 |
| india | karnataka | omsk hemorrhagic fever virus | species | 0 | 1 |
| india | karnataka | powassan virus | species | 0 | 1 |
| india | karnataka | west nile virus | species | 0 | 5 |
| india | kerala | aedes flavivirus | species | 9 | 0 |
| india | kerala | bagaza virus | species | 0 | 1 |
| india | kerala | classical swine fever virus | species | 21 | 0 |
| india | kerala | dengue virus | species | 56 | 23 |
| india | kerala | dengue virus 1 | no rank | 424 | 0 |
| india | kerala | dengue virus 2 | no rank | 42 | 0 |
| india | kerala | dengue virus 3 | no rank | 32 | 1 |
| india | kerala | dengue virus 4 | no rank | 7 | 0 |
| india | kerala | flavivirus | genus | 0 | 3 |
| india | kerala | hepatitis c virus | species | 0 | 2 |
| india | kerala | japanese encephalitis virus | species | 0 | 12 |
| india | kerala | kyasanur forest disease virus | species | 5 | 1 |
| india | kerala | west nile virus | species | 1 | 6 |
| india | kerala | zika virus | species | 50 | 0 |
| india | madhya pradesh | classical swine fever virus | species | 1 | 0 |
| india | madhya pradesh | dengue virus | species | 5 | 10 |
| india | madhya pradesh | dengue virus 1 | no rank | 5 | 2 |
| india | madhya pradesh | dengue virus 2 | no rank | 21 | 3 |
| india | madhya pradesh | dengue virus 3 | no rank | 11 | 1 |
| india | madhya pradesh | hepacivirus | genus | 0 | 2 |
| india | madhya pradesh | hepatitis c virus | species | 0 | 2 |
| india | madhya pradesh | japanese encephalitis virus | species | 1 | 3 |
| india | madhya pradesh | kyasanur forest disease virus | species | 0 | 1 |
| india | madhya pradesh | west nile virus | species | 0 | 1 |
| india | maharashtra | classical swine fever virus | species | 3 | 0 |
| india | maharashtra | dengue virus | species | 2 | 17 |
| india | maharashtra | dengue virus 1 | no rank | 1 | 1 |
| india | maharashtra | dengue virus 2 | no rank | 3 | 1 |
| india | maharashtra | dengue virus 3 | no rank | 7 | 0 |
| india | maharashtra | dengue virus 4 | no rank | 1 | 0 |
| india | maharashtra | hepacivirus | genus | 0 | 6 |
| india | maharashtra | hepatitis c virus | species | 0 | 12 |
| india | maharashtra | japanese encephalitis virus | species | 3 | 6 |
| india | maharashtra | kyasanur forest disease virus | species | 2 | 0 |
| india | maharashtra | west nile virus | species | 0 | 1 |
| india | manipur | bovine viral diarrhea virus 1 | species | 0 | 1 |
| india | manipur | classical swine fever virus | species | 3 | 0 |
| india | manipur | dengue virus | species | 0 | 4 |
| india | manipur | dengue virus 1 | no rank | 2 | 0 |
| india | manipur | dengue virus 2 | no rank | 2 | 0 |
| india | manipur | hepacivirus | genus | 0 | 2 |
| india | manipur | hepatitis c virus | species | 139 | 9 |
| india | manipur | japanese encephalitis virus | species | 21 | 5 |
| india | manipur | west nile virus | species | 0 | 1 |
| india | meghalaya | classical swine fever virus | species | 28 | 0 |
| india | meghalaya | dengue virus | species | 0 | 1 |
| india | meghalaya | hepatitis c virus | species | 0 | 1 |
| india | mizoram | bovine viral diarrhea virus 1 | species | 0 | 1 |
| india | mizoram | classical swine fever virus | species | 12 | 0 |
| india | mizoram | dengue virus | species | 0 | 1 |
| india | mizoram | hepatitis c virus | species | 0 | 2 |
| india | nagaland | bovine viral diarrhea virus 1 | species | 0 | 1 |
| india | nagaland | dengue virus | species | 0 | 4 |
| india | nagaland | dengue virus 2 | no rank | 0 | 1 |
| india | nagaland | flavivirus | genus | 0 | 2 |
| india | nagaland | hepatitis c virus | species | 0 | 5 |
| india | nagaland | japanese encephalitis virus | species | 0 | 4 |
| india | national capital territory of delhi | dengue virus | species | 0 | 90 |
| india | national capital territory of delhi | dengue virus 1 | no rank | 22 | 6 |
| india | national capital territory of delhi | dengue virus 2 | no rank | 25 | 5 |
| india | national capital territory of delhi | dengue virus 3 | no rank | 49 | 5 |
| india | national capital territory of delhi | dengue virus 4 | no rank | 18 | 0 |
| india | national capital territory of delhi | flavivirus | genus | 0 | 1 |
| india | national capital territory of delhi | gb virus c | species | 6 | 2 |
| india | national capital territory of delhi | hepacivirus | genus | 0 | 6 |
| india | national capital territory of delhi | hepatitis c virus | species | 20 | 28 |
| india | national capital territory of delhi | japanese encephalitis virus | species | 0 | 6 |
| india | odisha | dengue virus | species | 6 | 11 |
| india | odisha | dengue virus 1 | no rank | 1 | 0 |
| india | odisha | dengue virus 2 | no rank | 3 | 0 |
| india | odisha | dengue virus 3 | no rank | 5 | 0 |
| india | odisha | hepatitis c virus | species | 0 | 2 |
| india | odisha | japanese encephalitis virus | species | 7 | 7 |
| india | odisha | west nile virus | species | 0 | 1 |
| india | puducherry | dengue virus | species | 0 | 3 |
| india | puducherry | hepatitis c virus | species | 0 | 1 |
| india | puducherry | japanese encephalitis virus | species | 0 | 4 |
| india | punjab | classical swine fever virus | species | 4 | 0 |
| india | punjab | dengue virus | species | 0 | 7 |
| india | punjab | dengue virus 2 | no rank | 0 | 1 |
| india | punjab | dengue virus 4 | no rank | 1 | 0 |
| india | punjab | hepatitis c virus | species | 0 | 7 |
| india | punjab | japanese encephalitis virus | species | 0 | 3 |
| india | punjab | west nile virus | species | 0 | 1 |
| india | rajasthan | dengue virus | species | 0 | 26 |
| india | rajasthan | dengue virus 1 | no rank | 1 | 0 |
| india | rajasthan | dengue virus 2 | no rank | 3 | 0 |
| india | rajasthan | hepatitis c virus | species | 0 | 1 |
| india | rajasthan | japanese encephalitis virus | species | 0 | 2 |
| india | rajasthan | west nile virus | species | 0 | 1 |
| india | rio grande do norte | dengue virus 1 | no rank | 160 | 0 |
| india | rio grande do norte | dengue virus 2 | no rank | 236 | 0 |
| india | rio grande do norte | dengue virus 3 | no rank | 92 | 0 |
| india | rio grande do norte | dengue virus 4 | no rank | 124 | 0 |
| india | sikkim | classical swine fever virus | species | 2 | 0 |
| india | sikkim | dengue virus | species | 11 | 0 |
| india | sikkim | hepatitis c virus | species | 221 | 1 |
| india | tamil nadu | classical swine fever virus | species | 1 | 0 |
| india | tamil nadu | dengue virus | species | 0 | 47 |
| india | tamil nadu | dengue virus 1 | no rank | 25 | 0 |
| india | tamil nadu | dengue virus 2 | no rank | 25 | 2 |
| india | tamil nadu | dengue virus 3 | no rank | 11 | 0 |
| india | tamil nadu | dengue virus 4 | no rank | 7 | 0 |
| india | tamil nadu | flavivirus | genus | 0 | 1 |
| india | tamil nadu | hepacivirus | genus | 0 | 5 |
| india | tamil nadu | hepatitis c virus | species | 0 | 9 |
| india | tamil nadu | japanese encephalitis virus | species | 9 | 26 |
| india | tamil nadu | kyasanur forest disease virus | species | 0 | 1 |
| india | tamil nadu | west nile virus | species | 2 | 4 |
| india | tripura | classical swine fever virus | species | 1 | 0 |
| india | tripura | dengue virus | species | 0 | 1 |
| india | tripura | hepatitis c virus | species | 0 | 1 |
| india | uttar pradesh | classical swine fever virus | species | 0 | 1 |
| india | uttar pradesh | dengue virus | species | 0 | 16 |
| india | uttar pradesh | dengue virus 1 | no rank | 0 | 1 |
| india | uttar pradesh | dengue virus 3 | no rank | 8 | 0 |
| india | uttar pradesh | dengue virus 4 | no rank | 6 | 0 |
| india | uttar pradesh | flavivirus | genus | 0 | 2 |
| india | uttar pradesh | hepacivirus | genus | 0 | 1 |
| india | uttar pradesh | hepatitis c virus | species | 16 | 1 |
| india | uttar pradesh | hepatitis c virus subtype 3a | no rank | 2 | 0 |
| india | uttar pradesh | japanese encephalitis virus | species | 11 | 37 |
| india | uttar pradesh | west nile virus | species | 0 | 2 |
| india | uttarakhand | classical swine fever virus | species | 2 | 0 |
| india | uttarakhand | dengue virus | species | 0 | 3 |
| india | uttarakhand | hepatitis c virus | species | 0 | 1 |
| india | uttarakhand | japanese encephalitis virus | species | 0 | 1 |
| india | west bengal | classical swine fever virus | species | 5 | 0 |
| india | west bengal | dengue virus | species | 0 | 17 |
| india | west bengal | dengue virus 1 | no rank | 9 | 0 |
| india | west bengal | dengue virus 2 | no rank | 8 | 0 |
| india | west bengal | dengue virus 3 | no rank | 12 | 0 |
| india | west bengal | dengue virus 4 | no rank | 2 | 0 |
| india | west bengal | flavivirus | genus | 0 | 2 |
| india | west bengal | hepacivirus | genus | 0 | 3 |
| india | west bengal | hepatitis c virus | species | 177 | 8 |
| india | west bengal | japanese encephalitis virus | species | 51 | 29 |
| india | west bengal | murray valley encephalitis virus | species | 0 | 1 |
| india | west bengal | west nile virus | species | 4 | 2 |
| indonesia | | bovine viral diarrhea virus 1 | species | 15 | 0 |
| indonesia | | cell fusing agent virus | species | 6 | 0 |
| indonesia | | classical swine fever virus | species | 3 | 0 |
| indonesia | | culex flavivirus | species | 6 | 0 |
| indonesia | | culex theileri flavivirus | species | 2 | 0 |
| indonesia | | dengue virus | species | 40 | 5 |
| indonesia | | dengue virus 1 | no rank | 334 | 1 |
| indonesia | | dengue virus 2 | no rank | 184 | 1 |
| indonesia | | dengue virus 3 | no rank | 211 | 1 |
| indonesia | | dengue virus 4 | no rank | 76 | 1 |
| indonesia | | gb virus c | species | 9 | 0 |
| indonesia | | hepatitis c virus | species | 120 | 0 |
| indonesia | | hepatitis c virus 08.40.072 | no rank | 2 | 0 |
| indonesia | | hepatitis c virus 08.80.014 | no rank | 2 | 0 |
| indonesia | | hepatitis c virus 08.80.070 | no rank | 2 | 0 |
| indonesia | | hepatitis c virus 08.80.075 | no rank | 2 | 0 |
| indonesia | | hepatitis c virus genotype 1 | no rank | 127 | 0 |
| indonesia | | hepatitis c virus genotype 2 | no rank | 36 | 0 |
| indonesia | | hepatitis c virus genotype 3 | no rank | 36 | 0 |
| indonesia | | hepatitis c virus genotype 4 | no rank | 2 | 0 |
| indonesia | | hepatitis c virus isolate 06.10.009 | no rank | 2 | 0 |
| indonesia | | hepatitis c virus isolate 07.22.133 | no rank | 2 | 0 |
| indonesia | | hepatitis c virus isolate p.x01.27 | no rank | 2 | 0 |
| indonesia | | hepatitis c virus subtype 1a | no rank | 109 | 0 |
| indonesia | | hepatitis c virus subtype 1b | no rank | 102 | 0 |
| indonesia | | hepatitis c virus subtype 1c | no rank | 48 | 0 |
| indonesia | | hepatitis c virus subtype 2a | no rank | 24 | 0 |
| indonesia | | hepatitis c virus subtype 2e | no rank | 12 | 0 |
| indonesia | | hepatitis c virus subtype 2f | no rank | 1 | 0 |
| indonesia | | hepatitis c virus subtype 3a | no rank | 3 | 0 |
| indonesia | | hepatitis c virus subtype 3k | no rank | 19 | 0 |
| indonesia | | japanese encephalitis virus | species | 11 | 0 |
| indonesia | | mosquito flavivirus | no rank | 19 | 0 |
| indonesia | | zika virus | species | 1 | 0 |
| indonesia | aceh province | dengue virus | species | 0 | 3 |
| indonesia | aceh province | dengue virus 1 | no rank | 1 | 0 |
| indonesia | bali province | dengue virus | species | 0 | 9 |
| indonesia | bali province | dengue virus 1 | no rank | 41 | 0 |
| indonesia | bali province | dengue virus 2 | no rank | 47 | 1 |
| indonesia | bali province | dengue virus 3 | no rank | 10 | 1 |
| indonesia | bali province | dengue virus 4 | no rank | 12 | 0 |
| indonesia | bali province | flavivirus | genus | 0 | 1 |
| indonesia | bali province | hepatitis c virus | species | 0 | 1 |
| indonesia | bali province | japanese encephalitis virus | species | 3 | 13 |
| indonesia | bali province | zika virus | species | 0 | 1 |
| indonesia | central java province | dengue virus | species | 1 | 9 |
| indonesia | central java province | dengue virus 1 | no rank | 3 | 0 |
| indonesia | central java province | dengue virus 2 | no rank | 4 | 0 |
| indonesia | central java province | dengue virus 3 | no rank | 7 | 2 |
| indonesia | central java province | dengue virus 4 | no rank | 2 | 0 |
| indonesia | central java province | flavivirus | genus | 0 | 1 |
| indonesia | central java province | hepatitis c virus | species | 0 | 2 |
| indonesia | central java province | japanese encephalitis virus | species | 3 | 0 |
| indonesia | central java province | zika virus | species | 0 | 1 |
| indonesia | central kalimantan province | dengue virus 3 | no rank | 1 | 0 |
| indonesia | east java province | cell fusing agent virus | species | 6 | 0 |
| indonesia | east java province | culex flavivirus | species | 6 | 0 |
| indonesia | east java province | dengue virus | species | 0 | 7 |
| indonesia | east java province | dengue virus 1 | no rank | 116 | 0 |
| indonesia | east java province | dengue virus 2 | no rank | 20 | 1 |
| indonesia | east java province | dengue virus 3 | no rank | 22 | 0 |
| indonesia | east java province | dengue virus 4 | no rank | 5 | 0 |
| indonesia | east java province | gb virus c | species | 0 | 2 |
| indonesia | east java province | hepacivirus | genus | 0 | 3 |
| indonesia | east java province | hepatitis c virus | species | 0 | 7 |
| indonesia | east java province | japanese encephalitis virus | species | 0 | 4 |
| indonesia | east java province | yellow fever virus | species | 0 | 1 |
| indonesia | east nusa tenggara province | classical swine fever virus | species | 0 | 1 |
| indonesia | east nusa tenggara province | japanese encephalitis virus | species | 4 | 0 |
| indonesia | jakarta | dengue virus | species | 0 | 28 |
| indonesia | jakarta | dengue virus 1 | no rank | 4 | 1 |
| indonesia | jakarta | dengue virus 2 | no rank | 6 | 0 |
| indonesia | jakarta | dengue virus 3 | no rank | 16 | 0 |
| indonesia | jakarta | dengue virus 4 | no rank | 2 | 0 |
| indonesia | jakarta | hepacivirus | genus | 0 | 2 |
| indonesia | jakarta | hepatitis c virus | species | 0 | 7 |
| indonesia | jakarta | japanese encephalitis virus | species | 15 | 6 |
| indonesia | jambi province | dengue virus | species | 0 | 1 |
| indonesia | jambi province | dengue virus 1 | no rank | 1 | 0 |
| indonesia | jambi province | dengue virus 2 | no rank | 3 | 0 |
| indonesia | jambi province | dengue virus 3 | no rank | 2 | 0 |
| indonesia | jambi province | dengue virus 4 | no rank | 1 | 0 |
| indonesia | jambi province | zika virus | species | 37 | 1 |
| indonesia | maluku province | japanese encephalitis virus | species | 0 | 1 |
| indonesia | north sulawesi province | dengue virus | species | 0 | 1 |
| indonesia | north sulawesi province | dengue virus 1 | no rank | 1 | 0 |
| indonesia | north sulawesi province | dengue virus 2 | no rank | 2 | 0 |
| indonesia | north sulawesi province | dengue virus 3 | no rank | 11 | 0 |
| indonesia | north sulawesi province | dengue virus 4 | no rank | 2 | 0 |
| indonesia | north sumatra province | dengue virus | species | 0 | 1 |
| indonesia | papua province | dengue virus | species | 0 | 3 |
| indonesia | papua province | japanese encephalitis virus | species | 0 | 4 |
| indonesia | riau province | dengue virus | species | 0 | 1 |
| indonesia | south sulawesi province | dengue virus | species | 0 | 2 |
| indonesia | south sulawesi province | dengue virus 1 | no rank | 37 | 0 |
| indonesia | south sulawesi province | dengue virus 2 | no rank | 29 | 0 |
| indonesia | south sulawesi province | dengue virus 3 | no rank | 18 | 0 |
| indonesia | south sulawesi province | dengue virus 4 | no rank | 10 | 0 |
| indonesia | south sumatra province | dengue virus | species | 0 | 2 |
| indonesia | special region of yogyakarta | dengue virus | species | 0 | 5 |
| indonesia | special region of yogyakarta | dengue virus 1 | no rank | 14 | 0 |
| indonesia | special region of yogyakarta | dengue virus 2 | no rank | 8 | 0 |
| indonesia | special region of yogyakarta | dengue virus 3 | no rank | 23 | 0 |
| indonesia | special region of yogyakarta | dengue virus 4 | no rank | 9 | 0 |
| indonesia | special region of yogyakarta | gb virus c | species | 242 | 1 |
| indonesia | special region of yogyakarta | hepacivirus | genus | 0 | 2 |
| indonesia | special region of yogyakarta | hepatitis c virus | species | 0 | 4 |
| indonesia | special region of yogyakarta | hepatitis c virus subtype 1a | no rank | 95 | 0 |
| indonesia | special region of yogyakarta | hepatitis c virus subtype 1b | no rank | 1 | 0 |
| indonesia | special region of yogyakarta | hepatitis c virus subtype 1c | no rank | 2 | 0 |
| indonesia | special region of yogyakarta | hepatitis c virus subtype 3a | no rank | 2 | 0 |
| indonesia | special region of yogyakarta | japanese encephalitis virus | species | 1 | 0 |
| indonesia | west java province | aedes flavivirus | species | 1 | 0 |
| indonesia | west java province | cell fusing agent virus | species | 6 | 0 |
| indonesia | west java province | culex flavivirus | species | 1 | 0 |
| indonesia | west java province | dengue virus | species | 0 | 5 |
| indonesia | west java province | dengue virus 1 | no rank | 5 | 0 |
| indonesia | west java province | dengue virus 2 | no rank | 28 | 1 |
| indonesia | west java province | dengue virus 4 | no rank | 17 | 0 |
| indonesia | west java province | hepacivirus | genus | 0 | 1 |
| indonesia | west java province | hepatitis c virus | species | 0 | 3 |
| indonesia | west java province | japanese encephalitis virus | species | 1 | 4 |
| indonesia | west java province | yellow fever virus | species | 0 | 1 |
| indonesia | west nusa tenggara province | dengue virus 2 | no rank | 2 | 0 |
| indonesia | west nusa tenggara province | japanese encephalitis virus | species | 3 | 0 |
| indonesia | west nusa tenggara province | rodent pegivirus | species | 2 | 0 |
| iran | | bovine viral diarrhea virus 1 | species | 26 | 0 |
| iran | | bovine viral diarrhea virus 1a | no rank | 3 | 0 |
| iran | | bovine viral diarrhea virus 2 | no rank | 2 | 0 |
| iran | | bovine viral diarrhea virus type 1b | no rank | 1 | 0 |
| iran | | dengue virus | species | 2 | 0 |
| iran | | dengue virus 1 | no rank | 2 | 0 |
| iran | | dengue virus 2 | no rank | 1 | 0 |
| iran | | gb virus c | species | 15 | 0 |
| iran | | hepatitis c virus | species | 1385 | 0 |
| iran | | hepatitis c virus genotype 2 | no rank | 1 | 0 |
| iran | | hepatitis c virus subtype 1a | no rank | 128 | 0 |
| iran | | hepatitis c virus subtype 1b | no rank | 5 | 0 |
| iran | | hepatitis c virus subtype 3a | no rank | 202 | 0 |
| iran | | hepatitis c virus subtype 4a | no rank | 1 | 0 |
| iran | | hepatitis c virus subtype 5a | no rank | 1 | 0 |
| iran | | human hepegivirus 1 | species | 4 | 0 |
| iran | | west nile virus | species | 37 | 0 |
| iran | alborz province | bovine viral diarrhea virus 1 | species | 1 | 0 |
| iran | bushire province | hepacivirus | genus | 0 | 1 |
| iran | bushire province | hepatitis c virus | species | 0 | 1 |
| iran | chaharmahal and bakhtiari province | hepatitis c virus | species | 0 | 1 |
| iran | east azerbaijan province | bovine viral diarrhea virus 1 | species | 1 | 0 |
| iran | east azerbaijan province | hepatitis c virus | species | 0 | 3 |
| iran | fars province | bovine viral diarrhea virus 1 | species | 6 | 0 |
| iran | fars province | hepatitis c virus | species | 38 | 8 |
| iran | gilan province | hepacivirus | genus | 0 | 1 |
| iran | gilan province | hepatitis c virus | species | 0 | 8 |
| iran | golestan province | hepacivirus | genus | 0 | 1 |
| iran | golestan province | hepatitis c virus | species | 0 | 4 |
| iran | hamadan province | hepatitis c virus | species | 0 | 2 |
| iran | hormozgan province | hepatitis c virus | species | 0 | 2 |
| iran | isfahan province | bovine viral diarrhea virus 1 | species | 3 | 1 |
| iran | isfahan province | hepatitis c virus | species | 0 | 2 |
| iran | isfahan province | west nile virus | species | 0 | 1 |
| iran | kerman province | hepacivirus | genus | 0 | 2 |
| iran | kerman province | hepatitis c virus | species | 0 | 9 |
| iran | khuzestan province | bovine viral diarrhea virus 1 | species | 1 | 0 |
| iran | khuzestan province | hepacivirus | genus | 0 | 5 |
| iran | khuzestan province | hepatitis c virus | species | 0 | 6 |
| iran | lorestan province | hepatitis c virus | species | 0 | 2 |
| iran | markazi province | hepatitis c virus | species | 0 | 3 |
| iran | mazandaran province | bovine viral diarrhea virus 1 | species | 1 | 0 |
| iran | mazandaran province | dengue virus | species | 0 | 1 |
| iran | mazandaran province | hepacivirus | genus | 0 | 2 |
| iran | mazandaran province | hepatitis c virus | species | 115 | 6 |
| iran | mazandaran province | west nile virus | species | 0 | 1 |
| iran | qazvin province | bovine viral diarrhea virus 1 | species | 1 | 0 |
| iran | qazvin province | hepatitis c virus | species | 0 | 2 |
| iran | qom province | bovine viral diarrhea virus 1 | species | 1 | 0 |
| iran | razavi khorasan province | bovine viral diarrhea virus 1 | species | 1 | 3 |
| iran | razavi khorasan province | hepatitis c virus | species | 3 | 1 |
| iran | semnan province | hepatitis c virus | species | 0 | 1 |
| iran | sistan and baluchestan province | dengue virus | species | 0 | 2 |
| iran | sistan and baluchestan province | hepacivirus | genus | 0 | 1 |
| iran | sistan and baluchestan province | hepatitis c virus | species | 0 | 2 |
| iran | tehran province | bovine viral diarrhea virus 1 | species | 3 | 1 |
| iran | tehran province | gb virus c | species | 0 | 1 |
| iran | tehran province | hepacivirus | genus | 0 | 2 |
| iran | tehran province | hepatitis c virus | species | 112 | 33 |
| iran | tehran province | west nile virus | species | 0 | 1 |
| iran | west azerbaijan province | hepatitis c virus | species | 0 | 1 |
| iran | west azerbaijan province | west nile virus | species | 0 | 1 |
| iran | yazd province | hepacivirus | genus | 0 | 1 |
| iran | yazd province | hepatitis c virus | species | 0 | 3 |
| iran | zanjan province | bovine viral diarrhea virus 1 | species | 1 | 0 |
| iran | zanjan province | hepatitis c virus | species | 0 | 2 |
| iraq | | border disease virus | species | 1 | 0 |
| iraq | | bovine viral diarrhea virus 1 | species | 10 | 0 |
| iraq | | bovine viral diarrhea virus 2 | no rank | 4 | 0 |
| iraq | | gb virus c | species | 10 | 0 |
| iraq | | hepatitis c virus | species | 69 | 0 |
| iraq | | hepatitis c virus subtype 1a | no rank | 9 | 0 |
| iraq | | hepatitis c virus subtype 1b | no rank | 1 | 0 |
| iraq | | hepatitis c virus subtype 4a | no rank | 1 | 0 |
| iraq | baghdad governorate | hepacivirus | genus | 0 | 1 |
| iraq | baghdad governorate | hepatitis c virus | species | 0 | 4 |
| iraq | baghdad governorate | west nile virus | species | 0 | 1 |
| iraq | dahuk governorate | hepatitis c virus | species | 0 | 1 |
| iraq | sulaymaniyah governorate | bovine viral diarrhea virus 1 | species | 1 | 0 |
| ireland | | bovine viral diarrhea virus 1 | species | 551 | 0 |
| ireland | | dengue virus 1 | no rank | 2 | 0 |
| ireland | | dengue virus 2 | no rank | 3 | 0 |
| ireland | | hepatitis c virus | species | 4310 | 0 |
| ireland | | hepatitis c virus genotype 1 | no rank | 94 | 0 |
| ireland | | hepatitis c virus genotype 3 | no rank | 314 | 0 |
| ireland | | hepatitis c virus subtype 1a | no rank | 2 | 0 |
| ireland | | hepatitis c virus subtype 1b | no rank | 180 | 0 |
| ireland | | hepatitis c virus subtype 2b | no rank | 2 | 0 |
| ireland | | hepatitis c virus subtype 3a | no rank | 1 | 0 |
| ireland | | hepatitis c virus subtype 4a | no rank | 2 | 0 |
| ireland | | hepatitis c virus subtype 5a | no rank | 2 | 0 |
| ireland | | louping ill virus | species | 2 | 0 |
| ireland | leinster province | hepacivirus | genus | 0 | 3 |
| ireland | leinster province | hepatitis c virus | species | 0 | 5 |
| ireland | munster province | hepatitis c virus | species | 0 | 1 |
| israel | | barkedji virus | species | 1 | 0 |
| israel | | border disease virus | species | 1 | 0 |
| israel | | bovine viral diarrhea virus 1 | species | 3 | 0 |
| israel | | classical swine fever virus | species | 38 | 0 |
| israel | | hepatitis c virus | species | 99 | 0 |
| israel | | israel turkey meningoencephalomyelitis virus | species | 7 | 0 |
| israel | | pestivirus i | species | 2 | 0 |
| israel | | usutu virus | species | 9 | 0 |
| israel | | west nile virus | species | 185 | 0 |
| israel | | zika virus | species | 4 | 0 |
| israel | central district | west nile virus | species | 0 | 6 |
| israel | jerusalem district | hepatitis c virus | species | 0 | 6 |
| israel | jerusalem district | west nile virus | species | 0 | 1 |
| israel | northern district | classical swine fever virus | species | 0 | 1 |
| israel | northern district | hepatitis c virus | species | 0 | 1 |
| israel | southern district | hepatitis c virus | species | 0 | 2 |
| israel | southern district | west nile virus | species | 0 | 1 |
| israel | tel aviv district | hepatitis c virus | species | 0 | 2 |
| israel | tel aviv district | west nile virus | species | 0 | 4 |
| italy | | aedes flavivirus | species | 8 | 0 |
| italy | | atypical porcine pestivirus | no rank | 28 | 0 |
| italy | | border disease virus | species | 24 | 0 |
| italy | | bovine hepacivirus | species | 7 | 0 |
| italy | | bovine viral diarrhea virus 1 | species | 156 | 0 |
| italy | | bovine viral diarrhea virus 2 | no rank | 9 | 0 |
| italy | | bovine viral diarrhea virus 3 | species | 15 | 0 |
| italy | | bovine viral diarrhea virus type 1b | no rank | 2 | 0 |
| italy | | classical swine fever virus | species | 4 | 0 |
| italy | | dengue virus 1 | no rank | 3 | 0 |
| italy | | dengue virus 3 | no rank | 2 | 0 |
| italy | | dengue virus 4 | no rank | 1 | 0 |
| italy | | equine hepacivirus | species | 6 | 0 |
| italy | | equine pegivirus 1 | no rank | 8 | 0 |
| italy | | flavivirus 1493vn | species | 1 | 0 |
| italy | | flavivirus aedes/mo-ac/ita/2009 | species | 1 | 0 |
| italy | | flavivirus anopheles/pv-am/ita/2009 | species | 1 | 0 |
| italy | | flavivirus oc599-al/ita/2012 | species | 1 | 0 |
| italy | | flavivirus oc748-al/ita/2012 | species | 1 | 0 |
| italy | | gb virus c | species | 1 | 0 |
| italy | | hepatitis c virus | species | 7114 | 0 |
| italy | | hepatitis c virus genotype 2 | no rank | 30 | 0 |
| italy | | hepatitis c virus genotype 3 | no rank | 33 | 0 |
| italy | | hepatitis c virus genotype 4 | no rank | 23 | 0 |
| italy | | hepatitis c virus s52 | no rank | 1 | 0 |
| italy | | hepatitis c virus subtype 1a | no rank | 31 | 0 |
| italy | | hepatitis c virus subtype 1b | no rank | 2018 | 0 |
| italy | | hepatitis c virus subtype 2c | no rank | 10 | 0 |
| italy | | hepatitis c virus subtype 3a | no rank | 367 | 0 |
| italy | | human pegivirus | no rank | 16 | 0 |
| italy | | mosquito flavivirus | no rank | 71 | 0 |
| italy | | pegivirus k | species | 1 | 0 |
| italy | | pestivirus a | species | 19 | 0 |
| italy | | pestivirus sp. | species | 3 | 0 |
| italy | | plasmopara viticola associated jingman-like virus 1 | species | 2 | 0 |
| italy | | rodent hepacivirus | species | 3 | 0 |
| italy | | theiler's disease-associated virus | no rank | 6 | 0 |
| italy | | tick-borne encephalitis virus | species | 3 | 0 |
| italy | | tunisian small ruminant pestivirus | species | 7 | 0 |
| italy | | usutu virus | species | 216 | 4 |
| italy | | west nile virus | species | 227 | 15 |
| italy | | zika virus | species | 7 | 0 |
| italy | abruzzo region | hepacivirus | genus | 0 | 1 |
| italy | abruzzo region | hepatitis c virus | species | 0 | 4 |
| italy | aosta valley autonomous region | border disease virus | species | 266 | 0 |
| italy | aosta valley autonomous region | bovine viral diarrhea virus 1 | species | 25 | 1 |
| italy | aosta valley autonomous region | hepacivirus | genus | 0 | 1 |
| italy | apulia region | border disease virus | species | 2 | 1 |
| italy | apulia region | bovine hepacivirus | species | 28 | 0 |
| italy | apulia region | bovine viral diarrhea virus 1 | species | 50 | 0 |
| italy | apulia region | bovine viral diarrhea virus 2 | no rank | 3 | 0 |
| italy | apulia region | equine hepacivirus | species | 48 | 0 |
| italy | apulia region | hepacivirus | genus | 0 | 6 |
| italy | apulia region | hepatitis c virus | species | 0 | 8 |
| italy | apulia region | pestivirus | genus | 0 | 1 |
| italy | apulia region | west nile virus | species | 0 | 1 |
| italy | basilicata region | border disease virus | species | 1 | 0 |
| italy | basilicata region | bovine viral diarrhea virus 1 | species | 19 | 0 |
| italy | basilicata region | hepatitis c virus | species | 0 | 2 |
| italy | basilicata region | tick-borne encephalitis virus | species | 0 | 1 |
| italy | calabria region | bovine hepacivirus | species | 4 | 0 |
| italy | calabria region | bovine viral diarrhea virus 1 | species | 23 | 0 |
| italy | calabria region | bovine viral diarrhea virus 2 | no rank | 17 | 0 |
| italy | calabria region | hepacivirus | genus | 0 | 4 |
| italy | calabria region | hepatitis c virus | species | 0 | 8 |
| italy | campania region | bovine viral diarrhea virus 1 | species | 4 | 0 |
| italy | campania region | classical swine fever virus | species | 1 | 1 |
| italy | campania region | gb virus c | species | 0 | 1 |
| italy | campania region | hepacivirus | genus | 0 | 5 |
| italy | campania region | hepatitis c virus | species | 0 | 7 |
| italy | campania region | west nile virus | species | 1 | 0 |
| italy | emilia-romagna region | aedes flavivirus | species | 0 | 1 |
| italy | emilia-romagna region | apoi virus | species | 0 | 1 |
| italy | emilia-romagna region | bovine viral diarrhea virus 1 | species | 3 | 2 |
| italy | emilia-romagna region | classical swine fever virus | species | 4 | 0 |
| italy | emilia-romagna region | culex flavivirus | species | 0 | 1 |
| italy | emilia-romagna region | dengue virus | species | 0 | 9 |
| italy | emilia-romagna region | dengue virus 1 | no rank | 0 | 1 |
| italy | emilia-romagna region | flavivirus | genus | 0 | 5 |
| italy | emilia-romagna region | hepacivirus | genus | 0 | 1 |
| italy | emilia-romagna region | hepatitis c virus | species | 0 | 12 |
| italy | emilia-romagna region | japanese encephalitis virus | species | 0 | 1 |
| italy | emilia-romagna region | kamiti river virus | species | 0 | 2 |
| italy | emilia-romagna region | modoc virus | species | 0 | 1 |
| italy | emilia-romagna region | powassan virus | species | 0 | 1 |
| italy | emilia-romagna region | tick-borne encephalitis virus | species | 0 | 1 |
| italy | emilia-romagna region | usutu virus | species | 15 | 9 |
| italy | emilia-romagna region | west nile virus | species | 2 | 24 |
| italy | emilia-romagna region | yellow fever virus | species | 0 | 1 |
| italy | friuli-venezia giulia autonomous region | dengue virus | species | 0 | 1 |
| italy | friuli-venezia giulia autonomous region | flavivirus | genus | 0 | 1 |
| italy | friuli-venezia giulia autonomous region | tick-borne encephalitis virus | species | 14 | 4 |
| italy | friuli-venezia giulia autonomous region | usutu virus | species | 1 | 1 |
| italy | friuli-venezia giulia autonomous region | west nile virus | species | 0 | 2 |
| italy | lazio region | atypical porcine pestivirus | no rank | 3 | 0 |
| italy | lazio region | border disease virus | species | 3 | 0 |
| italy | lazio region | bovine viral diarrhea virus 1 | species | 10 | 0 |
| italy | lazio region | dengue virus | species | 0 | 1 |
| italy | lazio region | hepacivirus | genus | 0 | 4 |
| italy | lazio region | hepatitis c virus | species | 0 | 8 |
| italy | lazio region | tick-borne encephalitis virus | species | 0 | 1 |
| italy | lazio region | west nile virus | species | 0 | 1 |
| italy | lazio region | zika virus | species | 1 | 0 |
| italy | liguria region | dengue virus | species | 0 | 1 |
| italy | liguria region | hepatitis c virus | species | 0 | 1 |
| italy | liguria region | mosquito flavivirus | no rank | 0 | 1 |
| italy | liguria region | usutu virus | species | 214 | 1 |
| italy | liguria region | west nile virus | species | 0 | 1 |
| italy | lombardy region | aedes flavivirus | species | 0 | 1 |
| italy | lombardy region | bovine viral diarrhea virus 1 | species | 6 | 2 |
| italy | lombardy region | classical swine fever virus | species | 9 | 1 |
| italy | lombardy region | culex flavivirus | species | 0 | 1 |
| italy | lombardy region | dengue virus | species | 0 | 2 |
| italy | lombardy region | flavivirus | genus | 0 | 1 |
| italy | lombardy region | gb virus c | species | 0 | 2 |
| italy | lombardy region | hepacivirus | genus | 0 | 8 |
| italy | lombardy region | hepatitis c virus | species | 0 | 21 |
| italy | lombardy region | hepatitis c virus subtype 2a | no rank | 1 | 0 |
| italy | lombardy region | hepatitis c virus subtype 2c | no rank | 19 | 0 |
| italy | lombardy region | japanese encephalitis virus | species | 0 | 1 |
| italy | lombardy region | kamiti river virus | species | 0 | 1 |
| italy | lombardy region | usutu virus | species | 76 | 3 |
| italy | lombardy region | west nile virus | species | 11 | 12 |
| italy | marche region | border disease virus | species | 2 | 0 |
| italy | marche region | bovine viral diarrhea virus 1 | species | 3 | 0 |
| italy | marche region | usutu virus | species | 27 | 0 |
| italy | marche region | west nile virus | species | 0 | 1 |
| italy | molise region | usutu virus | species | 68 | 0 |
| italy | molise region | west nile virus | species | 0 | 2 |
| italy | piemonte region | aedes flavivirus | species | 0 | 1 |
| italy | piemonte region | border disease virus | species | 1 | 0 |
| italy | piemonte region | bovine hepacivirus | species | 4 | 0 |
| italy | piemonte region | bovine viral diarrhea virus 1 | species | 3 | 0 |
| italy | piemonte region | classical swine fever virus | species | 1 | 1 |
| italy | piemonte region | dengue virus | species | 0 | 4 |
| italy | piemonte region | hepacivirus | genus | 0 | 2 |
| italy | piemonte region | hepatitis c virus | species | 0 | 3 |
| italy | piemonte region | marisma mosquito virus | species | 0 | 1 |
| italy | piemonte region | tick-borne encephalitis virus | species | 0 | 1 |
| italy | piemonte region | usutu virus | species | 11 | 4 |
| italy | piemonte region | west nile virus | species | 0 | 3 |
| italy | sardinia autonomous region | bovine viral diarrhea virus 1 | species | 29 | 0 |
| italy | sardinia autonomous region | classical swine fever virus | species | 16 | 7 |
| italy | sardinia autonomous region | dengue virus | species | 0 | 3 |
| italy | sardinia autonomous region | hepacivirus | genus | 0 | 4 |
| italy | sardinia autonomous region | hepatitis c virus | species | 9 | 7 |
| italy | sardinia autonomous region | japanese encephalitis virus | species | 0 | 3 |
| italy | sardinia autonomous region | usutu virus | species | 17 | 0 |
| italy | sardinia autonomous region | west nile virus | species | 9 | 11 |
| italy | sicily autonomous region | border disease virus | species | 0 | 1 |
| italy | sicily autonomous region | bovine viral diarrhea virus 1 | species | 21 | 0 |
| italy | sicily autonomous region | bovine viral diarrhea virus 2 | no rank | 0 | 1 |
| italy | sicily autonomous region | classical swine fever virus | species | 0 | 1 |
| italy | sicily autonomous region | dengue virus | species | 0 | 1 |
| italy | sicily autonomous region | flavivirus | genus | 0 | 1 |
| italy | sicily autonomous region | gb virus c | species | 0 | 2 |
| italy | sicily autonomous region | hepacivirus | genus | 0 | 14 |
| italy | sicily autonomous region | hepatitis c virus | species | 0 | 24 |
| italy | sicily autonomous region | west nile virus | species | 0 | 3 |
| italy | south tyrol autonomous region | classical swine fever virus | species | 1 | 0 |
| italy | south tyrol autonomous region | culex flavivirus | species | 0 | 1 |
| italy | south tyrol autonomous region | dengue virus | species | 0 | 1 |
| italy | south tyrol autonomous region | flavivirus | genus | 0 | 1 |
| italy | south tyrol autonomous region | kamiti river virus | species | 0 | 1 |
| italy | south tyrol autonomous region | tick-borne encephalitis virus | species | 8 | 8 |
| italy | south tyrol autonomous region | usutu virus | species | 0 | 2 |
| italy | south tyrol autonomous region | west nile virus | species | 0 | 2 |
| italy | tuscany region | bovine viral diarrhea virus 1 | species | 2 | 1 |
| italy | tuscany region | dengue virus | species | 0 | 5 |
| italy | tuscany region | flavivirus | genus | 0 | 2 |
| italy | tuscany region | hepacivirus | genus | 0 | 1 |
| italy | tuscany region | hepatitis c virus | species | 10 | 4 |
| italy | tuscany region | japanese encephalitis virus | species | 0 | 3 |
| italy | tuscany region | tick-borne encephalitis virus | species | 0 | 6 |
| italy | tuscany region | usutu virus | species | 2 | 4 |
| italy | tuscany region | west nile virus | species | 1 | 12 |
| italy | umbria region | bovine viral diarrhea virus 1 | species | 10 | 0 |
| italy | umbria region | classical swine fever virus | species | 1 | 1 |
| italy | umbria region | hepacivirus | genus | 0 | 2 |
| italy | umbria region | hepatitis c virus | species | 0 | 2 |
| italy | umbria region | usutu virus | species | 9 | 0 |
| italy | veneto region | aedes flavivirus | species | 0 | 1 |
| italy | veneto region | bovine viral diarrhea virus 1 | species | 2 | 1 |
| italy | veneto region | dengue virus | species | 0 | 3 |
| italy | veneto region | equine hepacivirus | species | 9 | 0 |
| italy | veneto region | flavivirus | genus | 0 | 3 |
| italy | veneto region | hepacivirus | genus | 0 | 3 |
| italy | veneto region | hepatitis c virus | species | 0 | 8 |
| italy | veneto region | japanese encephalitis virus | species | 0 | 1 |
| italy | veneto region | tick-borne encephalitis virus | species | 0 | 3 |
| italy | veneto region | usutu virus | species | 10 | 3 |
| italy | veneto region | west nile virus | species | 18 | 19 |
| italy | veneto region | zika virus | species | 3 | 0 |
| ivory coast | | anopheles flavivirus | species | 2 | 0 |
| ivory coast | | bagaza virus | species | 1 | 0 |
| ivory coast | | dengue virus 1 | no rank | 7 | 0 |
| ivory coast | | dengue virus 2 | no rank | 10 | 0 |
| ivory coast | | dengue virus 3 | no rank | 2 | 0 |
| ivory coast | | hepatitis c virus | species | 5 | 0 |
| ivory coast | | nienokoue virus | species | 4 | 0 |
| ivory coast | | nounane virus | species | 3 | 0 |
| ivory coast | | tai forest virus b31 | species | 1 | 0 |
| ivory coast | | yellow fever virus | species | 7 | 0 |
| ivory coast | | zika virus | species | 33 | 0 |
| ivory coast | lagunes region | dengue virus 1 | no rank | 1 | 0 |
| ivory coast | lagunes region | dengue virus 2 | no rank | 1 | 0 |
| jamaica | | dengue virus | species | 1 | 0 |
| jamaica | | dengue virus 1 | no rank | 2 | 0 |
| jamaica | | dengue virus 2 | no rank | 4 | 0 |
| jamaica | | dengue virus 3 | no rank | 3 | 0 |
| jamaica | | dengue virus 4 | no rank | 2 | 0 |
| jamaica | | st. louis encephalitis virus | species | 1 | 0 |
| jamaica | | zika virus | species | 5 | 0 |
| jamaica | kingston parish | dengue virus | species | 0 | 2 |
| jamaica | kingston parish | hepatitis c virus | species | 0 | 1 |
| jamaica | portland parish | dengue virus | species | 0 | 1 |
| jamaica | saint ann parish | dengue virus | species | 0 | 1 |
| jamaica | westmoreland parish | dengue virus | species | 0 | 1 |
| japan | | apoi virus | species | 1 | 0 |
| japan | | bovine viral diarrhea virus 1 | species | 249 | 0 |
| japan | | bovine viral diarrhea virus 2 | no rank | 43 | 0 |
| japan | | classical swine fever virus | species | 19 | 0 |
| japan | | culex tritaeniorhynchus flavi-like virus | species | 1 | 0 |
| japan | | dengue virus 1 | no rank | 3 | 0 |
| japan | | dengue virus 2 | no rank | 3 | 0 |
| japan | | dengue virus 3 | no rank | 2 | 0 |
| japan | | dengue virus 4 | no rank | 1 | 0 |
| japan | | equine hepacivirus | species | 15 | 0 |
| japan | | equine hepacivirus jpn3/japan/2013 | species | 2 | 0 |
| japan | | feline pegivirus jp03-2471 | species | 1 | 0 |
| japan | | feline pegivirus jp03-3208 | species | 1 | 0 |
| japan | | firefly squid flavivirus | species | 2 | 0 |
| japan | | gb virus c | species | 48 | 0 |
| japan | | hepatitis c virus | species | 310 | 0 |
| japan | | hepatitis c virus genotype 2 | no rank | 2 | 0 |
| japan | | hepatitis c virus subtype 1a | no rank | 20 | 0 |
| japan | | hepatitis c virus subtype 1b | no rank | 1145 | 0 |
| japan | | hepatitis c virus subtype 2a | no rank | 97 | 0 |
| japan | | hepatitis c virus subtype 2b | no rank | 162 | 0 |
| japan | | hepatitis c virus subtype 2b/1a | no rank | 1 | 0 |
| japan | | hepatitis c virus subtype 2c | no rank | 2 | 0 |
| japan | | hepatitis c virus subtype 3a | no rank | 12 | 0 |
| japan | | hepatitis c virus subtype 3b | no rank | 1 | 0 |
| japan | | hepatitis c virus subtype 4a | no rank | 6 | 0 |
| japan | | japanese encephalitis virus | species | 63 | 5 |
| japan | | japanese encephalitis virus strain nakayama | no rank | 1 | 0 |
| japan | | louping ill virus | species | 1 | 0 |
| japan | | tick-borne encephalitis virus | species | 2 | 0 |
| japan | | yokose virus | species | 1 | 1 |
| japan | | zika virus | species | 3 | 0 |
| japan | aichi prefecture | bovine viral diarrhea virus 1 | species | 1 | 0 |
| japan | aichi prefecture | classical swine fever virus | species | 24 | 0 |
| japan | aichi prefecture | dengue virus 2 | no rank | 2 | 0 |
| japan | aichi prefecture | hepacivirus | genus | 0 | 1 |
| japan | aichi prefecture | hepatitis c virus | species | 0 | 2 |
| japan | aichi prefecture | japanese encephalitis virus | species | 3 | 0 |
| japan | aomori prefecture | border disease virus | species | 0 | 1 |
| japan | aomori prefecture | bovine viral diarrhea virus 1 | species | 0 | 1 |
| japan | aomori prefecture | hepatitis c virus | species | 0 | 1 |
| japan | chiba prefecture | aedes flavivirus | species | 7 | 0 |
| japan | chiba prefecture | classical swine fever virus | species | 1 | 0 |
| japan | chiba prefecture | culex flavivirus | species | 2 | 0 |
| japan | chiba prefecture | dengue virus 1 | no rank | 1 | 0 |
| japan | chiba prefecture | hepacivirus | genus | 0 | 1 |
| japan | chiba prefecture | hepatitis c virus | species | 0 | 5 |
| japan | chiba prefecture | hepatitis c virus subtype 1b | no rank | 40 | 0 |
| japan | chiba prefecture | hepatitis c virus subtype 2a | no rank | 40 | 0 |
| japan | chiba prefecture | hepatitis c virus subtype 2b | no rank | 70 | 0 |
| japan | chiba prefecture | japanese encephalitis virus | species | 12 | 0 |
| japan | chiba prefecture | zika virus | species | 1 | 0 |
| japan | ehime prefecture | hepatitis c virus | species | 0 | 1 |
| japan | ehime prefecture | japanese encephalitis virus | species | 4 | 0 |
| japan | ehime prefecture | jingmen tick virus | no rank | 28 | 0 |
| japan | fukui prefecture | classical swine fever virus | species | 3 | 0 |
| japan | fukuoka prefecture | dengue virus 2 | no rank | 1 | 0 |
| japan | fukuoka prefecture | gb virus c | species | 0 | 1 |
| japan | fukuoka prefecture | hepacivirus | genus | 0 | 5 |
| japan | fukuoka prefecture | hepatitis c virus | species | 0 | 16 |
| japan | fukuoka prefecture | japanese encephalitis virus | species | 0 | 2 |
| japan | fukuoka prefecture | west nile virus | species | 0 | 1 |
| japan | fukushima prefecture | classical swine fever virus | species | 1 | 0 |
| japan | fukushima prefecture | japanese encephalitis virus | species | 0 | 1 |
| japan | gifu prefecture | classical swine fever virus | species | 89 | 0 |
| japan | gifu prefecture | hepatitis c virus | species | 0 | 1 |
| japan | gunma prefecture | atypical porcine pestivirus | no rank | 1 | 0 |
| japan | gunma prefecture | bovine viral diarrhea virus 1 | species | 44 | 0 |
| japan | gunma prefecture | bovine viral diarrhea virus 2 | no rank | 10 | 0 |
| japan | gunma prefecture | classical swine fever virus | species | 4 | 0 |
| japan | gunma prefecture | dengue virus | species | 0 | 1 |
| japan | gunma prefecture | dengue virus 2 | no rank | 1 | 0 |
| japan | gunma prefecture | dengue virus 3 | no rank | 2 | 1 |
| japan | gunma prefecture | hepatitis c virus | species | 5 | 0 |
| japan | hiroshima prefecture | dengue virus | species | 0 | 1 |
| japan | hiroshima prefecture | gb virus c | species | 0 | 1 |
| japan | hiroshima prefecture | hepacivirus | genus | 0 | 6 |
| japan | hiroshima prefecture | hepatitis c virus | species | 1 | 11 |
| japan | hiroshima prefecture | hepatitis c virus subtype 1b | no rank | 198 | 0 |
| japan | hiroshima prefecture | hepatitis c virus subtype 2a | no rank | 28 | 0 |
| japan | hiroshima prefecture | hepatitis c virus subtype 2b | no rank | 15 | 0 |
| japan | hiroshima prefecture | japanese encephalitis virus | species | 10 | 3 |
| japan | hokkaido prefecture | aedes galloisi flavivirus | species | 42 | 1 |
| japan | hokkaido prefecture | border disease virus | species | 0 | 1 |
| japan | hokkaido prefecture | bovine viral diarrhea virus 1 | species | 38 | 5 |
| japan | hokkaido prefecture | bovine viral diarrhea virus 2 | no rank | 16 | 1 |
| japan | hokkaido prefecture | bovine viral diarrhea virus 2a | no rank | 3 | 0 |
| japan | hokkaido prefecture | bovine viral diarrhea virus eb01-3 | no rank | 2 | 0 |
| japan | hokkaido prefecture | bovine viral diarrhea virus eb02-5 | no rank | 2 | 0 |
| japan | hokkaido prefecture | bovine viral diarrhea virus en02-1 | no rank | 2 | 0 |
| japan | hokkaido prefecture | bovine viral diarrhea virus hy02-12 | no rank | 2 | 0 |
| japan | hokkaido prefecture | bovine viral diarrhea virus sr02-54 | no rank | 1 | 0 |
| japan | hokkaido prefecture | bovine viral diarrhea virus type 1b | no rank | 25 | 0 |
| japan | hokkaido prefecture | culex flavivirus | species | 2 | 0 |
| japan | hokkaido prefecture | dengue virus | species | 0 | 1 |
| japan | hokkaido prefecture | equine hepacivirus | species | 15 | 0 |
| japan | hokkaido prefecture | flavivirus | genus | 0 | 3 |
| japan | hokkaido prefecture | hepatitis c virus | species | 132 | 3 |
| japan | hokkaido prefecture | japanese encephalitis virus | species | 0 | 12 |
| japan | hokkaido prefecture | kamiti river virus | species | 0 | 1 |
| japan | hokkaido prefecture | langat virus | species | 0 | 2 |
| japan | hokkaido prefecture | omsk hemorrhagic fever virus | species | 0 | 1 |
| japan | hokkaido prefecture | russian spring-summer encephalitis virus | species | 0 | 1 |
| japan | hokkaido prefecture | st. louis encephalitis virus | species | 0 | 1 |
| japan | hokkaido prefecture | tick-borne encephalitis virus | species | 13 | 11 |
| japan | hokkaido prefecture | west nile virus | species | 0 | 3 |
| japan | hyogo prefecture | dengue virus | species | 0 | 1 |
| japan | hyogo prefecture | dengue virus 1 | no rank | 1 | 1 |
| japan | hyogo prefecture | japanese encephalitis virus | species | 1 | 2 |
| japan | ibaraki prefecture | border disease virus | species | 1 | 0 |
| japan | ibaraki prefecture | bovine viral diarrhea virus 1 | species | 4 | 0 |
| japan | ibaraki prefecture | classical swine fever virus | species | 1 | 0 |
| japan | ibaraki prefecture | hepatitis c virus | species | 133 | 0 |
| japan | ibaraki prefecture | hepatitis c virus subtype 1b | no rank | 3 | 0 |
| japan | ibaraki prefecture | japanese encephalitis virus | species | 0 | 2 |
| japan | ishikawa prefecture | bovine viral diarrhea virus 1 | species | 1 | 0 |
| japan | ishikawa prefecture | bovine viral diarrhea virus 2 | no rank | 2 | 0 |
| japan | ishikawa prefecture | japanese encephalitis virus | species | 1 | 3 |
| japan | ishikawa prefecture | jingmen tick virus | no rank | 4 | 0 |
| japan | iwate prefecture | border disease virus | species | 0 | 1 |
| japan | iwate prefecture | bovine viral diarrhea virus 1 | species | 29 | 1 |
| japan | iwate prefecture | bovine viral diarrhea virus 1a | no rank | 4 | 0 |
| japan | iwate prefecture | bovine viral diarrhea virus 2 | no rank | 4 | 0 |
| japan | iwate prefecture | bovine viral diarrhea virus 2a | no rank | 23 | 0 |
| japan | iwate prefecture | bovine viral diarrhea virus type 1b | no rank | 3 | 0 |
| japan | iwate prefecture | culex flavivirus | species | 2 | 0 |
| japan | iwate prefecture | hepacivirus | genus | 0 | 1 |
| japan | iwate prefecture | hepatitis c virus | species | 0 | 1 |
| japan | kagawa prefecture | japanese encephalitis virus | species | 7 | 1 |
| japan | kagoshima prefecture | bovine viral diarrhea virus 1 | species | 0 | 1 |
| japan | kagoshima prefecture | japanese encephalitis virus | species | 1 | 1 |
| japan | kanagawa prefecture | bovine viral diarrhea virus 1 | species | 0 | 1 |
| japan | kanagawa prefecture | classical swine fever virus | species | 1 | 1 |
| japan | kanagawa prefecture | pestivirus | genus | 0 | 1 |
| japan | kanagawa prefecture | zika virus | species | 2 | 0 |
| japan | kochi prefecture | japanese encephalitis virus | species | 13 | 0 |
| japan | kumamoto prefecture | bovine viral diarrhea virus 1 | species | 2 | 0 |
| japan | kumamoto prefecture | bovine viral diarrhea virus 2 | no rank | 4 | 0 |
| japan | kumamoto prefecture | flavivirus | genus | 0 | 1 |
| japan | kumamoto prefecture | hepacivirus | genus | 0 | 1 |
| japan | kumamoto prefecture | hepatitis c virus | species | 0 | 2 |
| japan | kumamoto prefecture | japanese encephalitis virus | species | 4 | 5 |
| japan | kyoto prefecture | dengue virus | species | 3 | 0 |
| japan | kyoto prefecture | hepatitis c virus | species | 0 | 2 |
| japan | kyoto prefecture | hepatitis c virus subtype 1b | no rank | 1 | 0 |
| japan | kyoto prefecture | japanese encephalitis virus | species | 108 | 4 |
| japan | kyoto prefecture | tick-borne encephalitis virus | species | 0 | 1 |
| japan | mie prefecture | aedes flavivirus | species | 4 | 0 |
| japan | mie prefecture | classical swine fever virus | species | 3 | 0 |
| japan | mie prefecture | culex flavivirus | species | 4 | 0 |
| japan | mie prefecture | hepatitis c virus | species | 4 | 0 |
| japan | mie prefecture | japanese encephalitis virus | species | 11 | 2 |
| japan | miyagi ken prefecture | hepatitis c virus | species | 0 | 1 |
| japan | miyagi ken prefecture | japanese encephalitis virus | species | 0 | 1 |
| japan | miyazaki prefecture | bovine viral diarrhea virus 1 | species | 2 | 0 |
| japan | miyazaki prefecture | hepacivirus | genus | 0 | 2 |
| japan | miyazaki prefecture | hepatitis c virus | species | 0 | 5 |
| japan | miyazaki prefecture | japanese encephalitis virus | species | 3 | 0 |
| japan | nagano prefecture | classical swine fever virus | species | 7 | 0 |
| japan | nagano prefecture | hepacivirus | genus | 0 | 1 |
| japan | nagano prefecture | hepatitis c virus | species | 0 | 2 |
| japan | nagasaki prefecture | aedes flavivirus | species | 3 | 0 |
| japan | nagasaki prefecture | culex flavivirus | species | 1 | 0 |
| japan | nagasaki prefecture | dengue virus | species | 0 | 5 |
| japan | nagasaki prefecture | hepacivirus | genus | 0 | 1 |
| japan | nagasaki prefecture | hepatitis c virus | species | 0 | 8 |
| japan | nagasaki prefecture | japanese encephalitis virus | species | 89 | 2 |
| japan | nagasaki prefecture | mosquito flavivirus | no rank | 2 | 0 |
| japan | nagasaki prefecture | west nile virus | species | 0 | 1 |
| japan | nagasaki prefecture | yellow fever virus | species | 0 | 0 |
| japan | nara prefecture | hepatitis c virus | species | 0 | 2 |
| japan | niigata prefecture | hepacivirus | genus | 0 | 1 |
| japan | niigata prefecture | hepatitis c virus | species | 1 | 1 |
| japan | oita prefecture | bovine viral diarrhea virus 1 | species | 6 | 0 |
| japan | oita prefecture | bovine viral diarrhea virus 2 | no rank | 2 | 0 |
| japan | oita prefecture | dengue virus | species | 0 | 1 |
| japan | oita prefecture | dengue virus 2 | no rank | 0 | 1 |
| japan | oita prefecture | entebbe bat virus | species | 0 | 1 |
| japan | oita prefecture | flavivirus | genus | 0 | 1 |
| japan | oita prefecture | japanese encephalitis virus | species | 19 | 3 |
| japan | oita prefecture | modoc virus | species | 0 | 1 |
| japan | oita prefecture | rio bravo virus | species | 0 | 1 |
| japan | oita prefecture | sepik virus | species | 0 | 1 |
| japan | oita prefecture | tick-borne encephalitis virus | species | 0 | 1 |
| japan | oita prefecture | west nile virus | species | 0 | 1 |
| japan | oita prefecture | yellow fever virus | species | 0 | 0 |
| japan | oita prefecture | yokose virus | species | 0 | 1 |
| japan | okayama prefecture | bovine viral diarrhea virus 1 | species | 6 | 0 |
| japan | okayama prefecture | bovine viral diarrhea virus 2 | no rank | 4 | 0 |
| japan | okayama prefecture | hepacivirus | genus | 0 | 1 |
| japan | okayama prefecture | hepatitis c virus | species | 0 | 4 |
| japan | okayama prefecture | japanese encephalitis virus | species | 1 | 0 |
| japan | okayama prefecture | sitobion miscanthi flavi-like virus 1 | species | 1 | 0 |
| japan | okinawa prefecture | atypical porcine pestivirus | no rank | 1 | 0 |
| japan | okinawa prefecture | bovine viral diarrhea virus 1 | species | 0 | 1 |
| japan | okinawa prefecture | classical swine fever virus | species | 7 | 1 |
| japan | okinawa prefecture | dengue virus | species | 0 | 3 |
| japan | okinawa prefecture | dengue virus 1 | no rank | 2 | 0 |
| japan | okinawa prefecture | dengue virus 4 | no rank | 1 | 0 |
| japan | okinawa prefecture | flavivirus | genus | 0 | 2 |
| japan | okinawa prefecture | hepacivirus | genus | 0 | 4 |
| japan | okinawa prefecture | hepatitis c virus | species | 0 | 6 |
| japan | okinawa prefecture | hepatitis c virus subtype 1a | no rank | 26 | 0 |
| japan | okinawa prefecture | japanese encephalitis virus | species | 90 | 18 |
| japan | okinawa prefecture | murray valley encephalitis virus | species | 0 | 1 |
| japan | okinawa prefecture | pestivirus | genus | 0 | 1 |
| japan | okinawa prefecture | west nile virus | species | 0 | 1 |
| japan | osaka prefecture | classical swine fever virus | species | 1 | 0 |
| japan | osaka prefecture | culex flavivirus | species | 2 | 0 |
| japan | osaka prefecture | dengue virus | species | 0 | 4 |
| japan | osaka prefecture | dengue virus 1 | no rank | 2 | 0 |
| japan | osaka prefecture | gb virus c | species | 0 | 1 |
| japan | osaka prefecture | hepacivirus | genus | 0 | 8 |
| japan | osaka prefecture | hepatitis c virus | species | 0 | 14 |
| japan | osaka prefecture | hepatitis c virus subtype 1b | no rank | 130 | 0 |
| japan | osaka prefecture | japanese encephalitis virus | species | 3 | 3 |
| japan | saga prefecture | hepacivirus | genus | 0 | 5 |
| japan | saga prefecture | hepatitis c virus | species | 0 | 7 |
| japan | saga prefecture | hepatitis c virus subtype 1b | no rank | 12 | 0 |
| japan | saga prefecture | japanese encephalitis virus | species | 0 | 1 |
| japan | saitama prefecture | classical swine fever virus | species | 10 | 0 |
| japan | saitama prefecture | dengue virus | species | 0 | 1 |
| japan | saitama prefecture | hepatitis c virus | species | 25 | 0 |
| japan | saitama prefecture | hepatitis c virus isolate m2123 | no rank | 1 | 0 |
| japan | saitama prefecture | japanese encephalitis virus | species | 0 | 1 |
| japan | shiga prefecture | classical swine fever virus | species | 5 | 0 |
| japan | shiga prefecture | japanese encephalitis virus | species | 0 | 1 |
| japan | shimane prefecture | dengue virus 4 | no rank | 1 | 0 |
| japan | shimane prefecture | hepacivirus | genus | 0 | 1 |
| japan | shimane prefecture | hepatitis c virus | species | 0 | 1 |
| japan | shimane prefecture | tick-borne encephalitis virus | species | 0 | 1 |
| japan | shizuoka prefecture | classical swine fever virus | species | 1 | 0 |
| japan | shizuoka prefecture | dengue virus | species | 0 | 2 |
| japan | shizuoka prefecture | dengue virus 1 | no rank | 2 | 1 |
| japan | shizuoka prefecture | japanese encephalitis virus | species | 3 | 0 |
| japan | tochigi prefecture | bovine viral diarrhea virus 1 | species | 6 | 1 |
| japan | tochigi prefecture | bovine viral diarrhea virus 2 | no rank | 0 | 1 |
| japan | tochigi prefecture | pestivirus | genus | 0 | 1 |
| japan | tokushima prefecture | hepacivirus | genus | 0 | 1 |
| japan | tokyo prefecture | culex flavivirus | species | 3 | 1 |
| japan | tokyo prefecture | dengue virus | species | 0 | 13 |
| japan | tokyo prefecture | dengue virus 1 | no rank | 23 | 1 |
| japan | tokyo prefecture | dengue virus 3 | no rank | 1 | 0 |
| japan | tokyo prefecture | flavivirus | genus | 0 | 2 |
| japan | tokyo prefecture | gb virus c | species | 0 | 1 |
| japan | tokyo prefecture | hepacivirus | genus | 0 | 7 |
| japan | tokyo prefecture | hepatitis c virus | species | 0 | 15 |
| japan | tokyo prefecture | hepatitis c virus subtype 2a | no rank | 2 | 0 |
| japan | tokyo prefecture | japanese encephalitis virus | species | 8 | 9 |
| japan | tokyo prefecture | west nile virus | species | 0 | 2 |
| japan | tokyo prefecture | zika virus | species | 1 | 0 |
| japan | tottori prefecture | japanese encephalitis virus | species | 2 | 2 |
| japan | toyama prefecture | aedes flavivirus | species | 4 | 0 |
| japan | toyama prefecture | classical swine fever virus | species | 5 | 0 |
| japan | toyama prefecture | culex flavivirus | species | 96 | 1 |
| japan | toyama prefecture | japanese encephalitis virus | species | 261 | 1 |
| japan | wakayama prefecture | japanese encephalitis virus | species | 0 | 1 |
| japan | wakayama prefecture | yamaguchi virus | species | 17 | 0 |
| japan | yamagata prefecture | gb virus c | species | 0 | 1 |
| japan | yamagata prefecture | hepacivirus | genus | 0 | 1 |
| japan | yamagata prefecture | hepatitis c virus | species | 0 | 3 |
| japan | yamaguchi prefecture | gb virus c | species | 0 | 1 |
| japan | yamaguchi prefecture | hepacivirus | genus | 0 | 1 |
| japan | yamaguchi prefecture | hepatitis c virus | species | 0 | 3 |
| japan | yamaguchi prefecture | japanese encephalitis virus | species | 7 | 1 |
| japan | yamaguchi prefecture | mosquito flavivirus | no rank | 12 | 0 |
| japan | yamaguchi prefecture | yamaguchi virus | species | 15 | 0 |
| japan | yamanashi prefecture | classical swine fever virus | species | 106 | 0 |
| japan | yamanashi prefecture | hepatitis c virus | species | 0 | 1 |
| jordan | | gb virus c | species | 13 | 0 |
| jordan | amman governorate | hepacivirus | genus | 0 | 1 |
| jordan | amman governorate | hepatitis c virus | species | 0 | 1 |
| jordan | balqa governorate | west nile virus | species | 0 | 1 |
| kazakhstan | | gb virus c | species | 1 | 0 |
| kazakhstan | | tick-borne encephalitis virus | species | 4 | 0 |
| kazakhstan | almaty city | hepatitis c virus | species | 0 | 1 |
| kazakhstan | almaty region | tick-borne encephalitis virus | species | 30 | 0 |
| kazakhstan | aqmola region | tick-borne encephalitis virus | species | 1 | 0 |
| kazakhstan | east kazakhstan region | tick-borne encephalitis virus | species | 0 | 1 |
| kazakhstan | west kazakhstan region | west nile virus | species | 2 | 0 |
| kenya | | anopheles flavivirus | species | 1 | 0 |
| kenya | | bat hepacivirus | species | 9 | 0 |
| kenya | | bat pegivirus | no rank | 11 | 0 |
| kenya | | cell fusing agent virus | species | 1 | 0 |
| kenya | | culex flavivirus | species | 22 | 0 |
| kenya | | dengue virus | species | 14 | 1 |
| kenya | | dengue virus 1 | no rank | 2 | 0 |
| kenya | | dengue virus 2 | no rank | 33 | 0 |
| kenya | | dengue virus 3 | no rank | 1 | 0 |
| kenya | | gb virus c | species | 1 | 0 |
| kenya | | hepacivirus k | species | 2 | 0 |
| kenya | | hepacivirus l | species | 1 | 0 |
| kenya | | hepacivirus m | species | 2 | 0 |
| kenya | | hepatitis c virus | species | 48 | 0 |
| kenya | | jingmen tick virus | no rank | 1 | 0 |
| kenya | | kamiti river virus | species | 1 | 0 |
| kenya | | mosquito flavivirus | no rank | 11 | 0 |
| kenya | | pegivirus g | species | 1 | 0 |
| kenya | | pestivirus pg-2 | no rank | 1 | 0 |
| kenya | | takaungu virus | species | 1 | 0 |
| kenya | | trinbago virus | species | 1 | 0 |
| kenya | | wesselsbron virus | species | 1 | 0 |
| kenya | | west nile virus | species | 3 | 0 |
| kenya | | yellow fever virus | species | 2 | 0 |
| kenya | central province | cell fusing agent virus | species | 0 | 2 |
| kenya | central province | flavivirus | genus | 0 | 2 |
| kenya | central province | kamiti river virus | species | 0 | 2 |
| kenya | coast province | dengue virus | species | 0 | 1 |
| kenya | coast province | dengue virus 2 | no rank | 126 | 0 |
| kenya | coast province | dengue virus 3 | no rank | 18 | 0 |
| kenya | coast province | west nile virus | species | 0 | 2 |
| kenya | eastern province | dengue virus | species | 0 | 1 |
| kenya | eastern province | west nile virus | species | 0 | 1 |
| kenya | eastern province | yellow fever virus | species | 0 | 1 |
| kenya | nairobi province | dengue virus | species | 0 | 3 |
| kenya | nairobi province | dengue virus 2 | no rank | 0 | 1 |
| kenya | nairobi province | hepacivirus | genus | 0 | 1 |
| kenya | nairobi province | hepatitis c virus | species | 0 | 9 |
| kenya | nairobi province | kadam virus | species | 0 | 1 |
| kenya | nairobi province | yellow fever virus | species | 0 | 1 |
| kenya | north eastern province | dengue virus | species | 0 | 1 |
| kenya | north eastern province | west nile virus | species | 1 | 1 |
| kenya | north eastern province | yellow fever virus | species | 0 | 1 |
| kenya | nyanza province | dengue virus | species | 0 | 1 |
| kenya | nyanza province | dengue virus 2 | no rank | 5 | 0 |
| kenya | nyanza province | dengue virus 3 | no rank | 4 | 0 |
| kenya | nyanza province | dengue virus 4 | no rank | 5 | 0 |
| kenya | nyanza province | hepatitis c virus | species | 0 | 1 |
| kenya | rift valley province | flavivirus | genus | 0 | 1 |
| kenya | rift valley province | west nile virus | species | 82 | 4 |
| kenya | rift valley province | yellow fever virus | species | 0 | 1 |
| kenya | western province | cell fusing agent virus | species | 2 | 0 |
| kenya | western province | hepatitis c virus | species | 0 | 1 |
| kiribati | | dengue virus 1 | no rank | 4 | 0 |
| kiribati | | dengue virus 4 | no rank | 1 | 0 |
| kiribati | | hepatitis c virus | species | 0 | 1 |
| kosovo | | bovine viral diarrhea virus 1 | species | 0 | 1 |
| kosovo | | classical swine fever virus | species | 1 | 0 |
| kosovo | | hepatitis c virus | species | 328 | 0 |
| kosovo | | jingmen tick virus | no rank | 12 | 0 |
| kosovo | gjilan municipality | hepatitis c virus | species | 0 | 1 |
| kosovo | mitrovica municipality | hepatitis c virus | species | 0 | 1 |
| kosovo | prishtina municipality | hepatitis c virus | species | 0 | 1 |
| kosovo | prizren municipality | hepatitis c virus | species | 0 | 1 |
| kuwait | | dengue virus | species | 0 | 2 |
| kuwait | | gb virus c | species | 4 | 1 |
| kuwait | | hepatitis c virus | species | 7 | 15 |
| kyrgyzstan | | gb virus c | species | 3 | 0 |
| kyrgyzstan | | sokoluk virus | species | 6 | 0 |
| kyrgyzstan | | tick-borne encephalitis virus | species | 1 | 0 |
| kyrgyzstan | issyk-kul region | tick-borne encephalitis virus | species | 1 | 0 |
| laos | | dengue virus | species | 8 | 1 |
| laos | | dengue virus 1 | no rank | 28 | 0 |
| laos | | dengue virus 2 | no rank | 11 | 0 |
| laos | | dengue virus 3 | no rank | 8 | 0 |
| laos | | dengue virus 4 | no rank | 14 | 0 |
| laos | | hepacivirus sp. | species | 4 | 0 |
| laos | | hepatitis c virus | species | 179 | 0 |
| laos | | japanese encephalitis virus | species | 5 | 4 |
| laos | | jingmen tick virus | no rank | 4 | 0 |
| laos | | pegivirus sp. | species | 1 | 0 |
| laos | attapeu province | dengue virus | species | 0 | 1 |
| laos | attapeu province | dengue virus 1 | no rank | 6 | 0 |
| laos | attapeu province | dengue virus 2 | no rank | 7 | 0 |
| laos | attapeu province | dengue virus 4 | no rank | 6 | 0 |
| laos | champasak province | dengue virus | species | 2 | 0 |
| laos | champasak province | dengue virus 2 | no rank | 1 | 0 |
| laos | champasak province | dengue virus 3 | no rank | 2 | 0 |
| laos | khammouan province | flavivirus | genus | 0 | 1 |
| laos | louangnamtha province | dengue virus 1 | no rank | 8 | 0 |
| laos | louangnamtha province | dengue virus 2 | no rank | 6 | 0 |
| laos | luang prabang province | dengue virus | species | 2 | 1 |
| laos | luang prabang province | dengue virus 1 | no rank | 1 | 0 |
| laos | luang prabang province | dengue virus 2 | no rank | 4 | 0 |
| laos | luang prabang province | japanese encephalitis virus | species | 0 | 2 |
| laos | oudomxai province | dengue virus | species | 0 | 1 |
| laos | oudomxai province | dengue virus 3 | no rank | 6 | 0 |
| laos | oudomxai province | japanese encephalitis virus | species | 0 | 1 |
| laos | salavan province | dengue virus | species | 0 | 1 |
| laos | salavan province | dengue virus 1 | no rank | 55 | 0 |
| laos | salavan province | dengue virus 2 | no rank | 2 | 0 |
| laos | salavan province | dengue virus 4 | no rank | 1 | 0 |
| laos | savannakhet province | dengue virus | species | 0 | 2 |
| laos | savannakhet province | dengue virus 2 | no rank | 4 | 0 |
| laos | savannakhet province | dengue virus 4 | no rank | 1 | 0 |
| laos | savannakhet province | japanese encephalitis virus | species | 0 | 2 |
| laos | viangchan province | dengue virus | species | 5 | 0 |
| laos | viangchan province | dengue virus 1 | no rank | 39 | 0 |
| laos | viangchan province | dengue virus 2 | no rank | 7 | 0 |
| laos | viangchan province | dengue virus 3 | no rank | 8 | 0 |
| laos | viangchan province | dengue virus 4 | no rank | 26 | 0 |
| laos | viangchan province | hepatitis c virus | species | 1 | 0 |
| laos | viangchan province | japanese encephalitis virus | species | 4 | 0 |
| laos | vientiane prefecture | dengue virus | species | 54 | 8 |
| laos | vientiane prefecture | dengue virus 1 | no rank | 13 | 0 |
| laos | vientiane prefecture | dengue virus 2 | no rank | 46 | 0 |
| laos | vientiane prefecture | dengue virus 3 | no rank | 1 | 1 |
| laos | vientiane prefecture | flavivirus | genus | 0 | 1 |
| laos | vientiane prefecture | gb virus c | species | 0 | 1 |
| laos | vientiane prefecture | hepatitis c virus | species | 0 | 2 |
| laos | vientiane prefecture | japanese encephalitis virus | species | 0 | 5 |
| laos | vientiane prefecture | murray valley encephalitis virus | species | 0 | 1 |
| laos | vientiane prefecture | west nile virus | species | 0 | 1 |
| laos | vientiane prefecture | zika virus | species | 0 | 1 |
| laos | xiangkhouang province | dengue virus | species | 0 | 1 |
| laos | xiangkhouang province | japanese encephalitis virus | species | 0 | 1 |
| latvia | | hepatitis c virus | species | 19 | 0 |
| latvia | | tick-borne encephalitis virus | species | 12 | 0 |
| latvia | riga municipality | classical swine fever virus | species | 2 | 0 |
| latvia | riga municipality | tick-borne encephalitis virus | species | 0 | 1 |
| lebanon | | hepatitis c virus | species | 1 | 0 |
| lebanon | beirut governorate | hepacivirus | genus | 0 | 2 |
| lebanon | beirut governorate | hepatitis c virus | species | 0 | 5 |
| lebanon | beirut governorate | west nile virus | species | 0 | 1 |
| liberia | | anopheles flavivirus variant 1 | no rank | 2 | 0 |
| liberia | | anopheles flavivirus variant 2 | no rank | 1 | 0 |
| libya | benghazi district | hepacivirus | genus | 0 | 1 |
| libya | benghazi district | hepatitis c virus | species | 0 | 3 |
| libya | tripoli district | hepacivirus | genus | 0 | 2 |
| libya | tripoli district | hepatitis c virus | species | 0 | 5 |
| libya | tripoli district | west nile virus | species | 0 | 1 |
| liechtenstein | | tick-borne encephalitis virus | species | 0 | 2 |
| lithuania | | classical swine fever virus | species | 12 | 0 |
| lithuania | | hepatitis c virus | species | 285 | 0 |
| lithuania | | tick-borne encephalitis virus | species | 68 | 0 |
| lithuania | alytus municipality | tick-borne encephalitis virus | species | 8 | 0 |
| lithuania | kaunas municipality | tick-borne encephalitis virus | species | 4 | 1 |
| lithuania | klaipeda municipality | hepatitis c virus | species | 0 | 1 |
| lithuania | marijampole municipality | tick-borne encephalitis virus | species | 6 | 0 |
| lithuania | panevezys municipality | tick-borne encephalitis virus | species | 5 | 1 |
| lithuania | siauliai municipality | tick-borne encephalitis virus | species | 19 | 2 |
| lithuania | telsiai municipality | tick-borne encephalitis virus | species | 11 | 0 |
| lithuania | vilnius municipality | hepacivirus | genus | 0 | 1 |
| lithuania | vilnius municipality | hepatitis c virus | species | 0 | 2 |
| lithuania | vilnius municipality | tick-borne encephalitis virus | species | 1 | 0 |
| luxembourg | | hepacivirus | genus | 0 | 3 |
| luxembourg | | hepatitis c virus | species | 0 | 6 |
| luxembourg | | tick-borne encephalitis virus | species | 0 | 1 |
| luxembourg | | usutu virus | species | 1 | 0 |
| macao | | dengue virus | species | 0 | 3 |
| macao | | hepacivirus | genus | 0 | 4 |
| macao | | hepatitis c virus | species | 0 | 6 |
| macedonia | bitola municipality | hepatitis c virus | species | 0 | 1 |
| madagascar | | dengue virus 1 | no rank | 2 | 0 |
| madagascar | | dengue virus 3 | no rank | 2 | 0 |
| madagascar | | hepatitis c virus | species | 49 | 0 |
| madagascar | | human pegivirus | no rank | 4 | 0 |
| madagascar | | indri pegivirus | species | 1 | 0 |
| madagascar | | lepilemur pegivirus | species | 1 | 0 |
| madagascar | | mosquito flavivirus | no rank | 2 | 0 |
| madagascar | | sifaka hepacivirus | species | 9 | 0 |
| madagascar | | sifaka pegivirus | species | 3 | 0 |
| madagascar | | west nile virus | species | 16 | 0 |
| madagascar | amoron'i mania region | west nile virus | species | 0 | 1 |
| madagascar | analamanga region | hepacivirus | genus | 0 | 2 |
| madagascar | analamanga region | hepatitis c virus | species | 49 | 3 |
| madagascar | analamanga region | west nile virus | species | 0 | 1 |
| madagascar | atsinanana region | hepatitis c virus | species | 0 | 1 |
| madagascar | boeny region | west nile virus | species | 0 | 1 |
| malawi | central region | hepacivirus | genus | 0 | 1 |
| malawi | central region | hepatitis c virus | species | 0 | 1 |
| malaysia | | batu cave virus | species | 1 | 0 |
| malaysia | | batu kawa virus | species | 1 | 0 |
| malaysia | | bovine viral diarrhea virus 1 | species | 2 | 0 |
| malaysia | | bovine viral diarrhea virus 2 | no rank | 1 | 0 |
| malaysia | | carey island virus | species | 1 | 0 |
| malaysia | | classical swine fever virus | species | 1 | 0 |
| malaysia | | dengue virus | species | 2 | 0 |
| malaysia | | dengue virus 1 | no rank | 264 | 0 |
| malaysia | | dengue virus 2 | no rank | 206 | 0 |
| malaysia | | dengue virus 3 | no rank | 124 | 0 |
| malaysia | | dengue virus 4 | no rank | 67 | 0 |
| malaysia | | duck tembusu virus | no rank | 8 | 0 |
| malaysia | | hepatitis c virus | species | 503 | 0 |
| malaysia | | hepatitis c virus genotype 6 | no rank | 1 | 0 |
| malaysia | | human pegivirus | no rank | 98 | 0 |
| malaysia | | japanese encephalitis virus | species | 4 | 6 |
| malaysia | | jugra virus | species | 3 | 0 |
| malaysia | | kunjin virus | no rank | 2 | 1 |
| malaysia | | langat virus | species | 3 | 0 |
| malaysia | | sitiawan virus | no rank | 2 | 0 |
| malaysia | | tembusu virus | species | 6 | 0 |
| malaysia | | west nile virus | species | 23 | 0 |
| malaysia | | zika virus | species | 43 | 0 |
| malaysia | johor | dengue virus | species | 0 | 3 |
| malaysia | johor | dengue virus 1 | no rank | 24 | 0 |
| malaysia | johor | dengue virus 2 | no rank | 42 | 0 |
| malaysia | kedah | dengue virus | species | 0 | 1 |
| malaysia | kelantan | dengue virus | species | 0 | 2 |
| malaysia | kelantan | hepatitis c virus | species | 0 | 2 |
| malaysia | kuala lumpur | dengue virus | species | 0 | 30 |
| malaysia | kuala lumpur | dengue virus 2 | no rank | 2 | 0 |
| malaysia | kuala lumpur | dengue virus 3 | no rank | 5 | 0 |
| malaysia | kuala lumpur | dengue virus 4 | no rank | 2 | 0 |
| malaysia | kuala lumpur | hepacivirus | genus | 0 | 1 |
| malaysia | kuala lumpur | hepatitis c virus | species | 0 | 7 |
| malaysia | kuala lumpur | human pegivirus | no rank | 0 | 1 |
| malaysia | kuala lumpur | japanese encephalitis virus | species | 0 | 1 |
| malaysia | kuala lumpur | west nile virus | species | 0 | 1 |
| malaysia | negeri sembilan | dengue virus | species | 0 | 1 |
| malaysia | pahang | dengue virus | species | 0 | 2 |
| malaysia | pahang | hepatitis c virus | species | 0 | 1 |
| malaysia | perak | dengue virus | species | 0 | 2 |
| malaysia | perak | dengue virus 2 | no rank | 0 | 1 |
| malaysia | perak | duck tembusu virus | no rank | 0 | 1 |
| malaysia | perak | japanese encephalitis virus | species | 0 | 2 |
| malaysia | perak | ntaya virus | species | 0 | 1 |
| malaysia | perak | tembusu virus | species | 0 | 1 |
| malaysia | pulau pinang | dengue virus | species | 0 | 11 |
| malaysia | pulau pinang | hepatitis c virus | species | 0 | 1 |
| malaysia | pulau pinang | japanese encephalitis virus | species | 0 | 2 |
| malaysia | putrajaya | dengue virus | species | 0 | 2 |
| malaysia | sabah | dengue virus | species | 0 | 3 |
| malaysia | sabah | dengue virus 1 | no rank | 2 | 0 |
| malaysia | sabah | dengue virus 2 | no rank | 1 | 0 |
| malaysia | sabah | dengue virus 3 | no rank | 2 | 0 |
| malaysia | sabah | dengue virus 4 | no rank | 4 | 0 |
| malaysia | sabah | japanese encephalitis virus | species | 0 | 2 |
| malaysia | sabah | zika virus | species | 4 | 1 |
| malaysia | sarawak | dengue virus | species | 0 | 12 |
| malaysia | sarawak | dengue virus 2 | no rank | 8 | 0 |
| malaysia | sarawak | dengue virus 3 | no rank | 2 | 0 |
| malaysia | sarawak | dengue virus 4 | no rank | 12 | 0 |
| malaysia | sarawak | japanese encephalitis virus | species | 0 | 13 |
| malaysia | sarawak | kampung karu virus | species | 2 | 0 |
| malaysia | sarawak | tembusu virus | species | 0 | 1 |
| malaysia | sarawak | west nile virus | species | 0 | 1 |
| malaysia | selangor | dengue virus | species | 0 | 28 |
| malaysia | selangor | dengue virus 1 | no rank | 0 | 1 |
| malaysia | selangor | dengue virus 2 | no rank | 27 | 1 |
| malaysia | selangor | dengue virus 3 | no rank | 31 | 0 |
| malaysia | selangor | dengue virus 4 | no rank | 34 | 0 |
| malaysia | selangor | japanese encephalitis virus | species | 0 | 7 |
| malaysia | selangor | west nile virus | species | 0 | 1 |
| malaysia | terengganu | hepatitis c virus | species | 0 | 1 |
| maldives | | dakar bat virus | species | 0 | 1 |
| maldives | | dengue virus | species | 2 | 38 |
| maldives | | dengue virus 1 | no rank | 7 | 1 |
| maldives | | dengue virus 2 | no rank | 1 | 7 |
| maldives | | dengue virus 3 | no rank | 4 | 0 |
| maldives | | flavivirus | genus | 0 | 8 |
| maldives | | hepacivirus | genus | 0 | 8 |
| maldives | | hepatitis c virus | species | 0 | 14 |
| maldives | | japanese encephalitis virus | species | 0 | 9 |
| maldives | | tick-borne encephalitis virus | species | 0 | 1 |
| maldives | | wesselsbron virus | species | 0 | 1 |
| maldives | | west nile virus | species | 0 | 12 |
| maldives | | yellow fever virus | species | 0 | 4 |
| mali | | dengue virus 2 | no rank | 1 | 0 |
| mali | | hepatitis c virus | species | 29 | 0 |
| mali | | human pegivirus | no rank | 10 | 0 |
| mali | | yellow fever virus | species | 4 | 0 |
| mali | bamako region | dengue virus | species | 0 | 1 |
| mali | bamako region | hepatitis c virus | species | 0 | 3 |
| mali | bamako region | yellow fever virus | species | 0 | 1 |
| mali | segou region | hepatitis c virus | species | 0 | 1 |
| malta | | hepatitis c virus | species | 0 | 2 |
| marshall islands | | dengue virus 1 | no rank | 1 | 0 |
| marshall islands | | dengue virus 4 | no rank | 1 | 0 |
| martinique | | dengue virus | species | 1 | 36 |
| martinique | | dengue virus 1 | no rank | 4 | 0 |
| martinique | | dengue virus 2 | no rank | 6 | 1 |
| martinique | | dengue virus 3 | no rank | 17 | 2 |
| martinique | | dengue virus 4 | no rank | 8 | 0 |
| martinique | | gb virus c | species | 0 | 1 |
| martinique | | hepacivirus | genus | 0 | 5 |
| martinique | | hepatitis c virus | species | 46 | 5 |
| martinique | | west nile virus | species | 0 | 1 |
| martinique | | yellow fever virus | species | 0 | 1 |
| martinique | | zika virus | species | 2 | 15 |
| mauritania | | dengue virus 1 | no rank | 1 | 0 |
| mauritania | | dengue virus 2 | no rank | 11 | 0 |
| mauritania | | hepatitis c virus | species | 3 | 0 |
| mauritania | | human pegivirus | no rank | 3 | 0 |
| mauritania | | yellow fever virus | species | 1 | 0 |
| mauritania | nouakchott region | dengue virus | species | 0 | 2 |
| mauritania | nouakchott region | hepatitis c virus | species | 0 | 1 |
| mauritania | tagant region | dengue virus | species | 0 | 1 |
| mauritius | | dengue virus | species | 0 | 7 |
| mauritius | | dengue virus 2 | no rank | 0 | 1 |
| mauritius | | hepacivirus | genus | 0 | 1 |
| mauritius | | hepatitis c virus | species | 6 | 3 |
| mauritius | | west nile virus | species | 0 | 1 |
| mauritius | rodrigues | west nile virus | species | 0 | 1 |
| mayotte | | dengue virus | species | 0 | 2 |
| mexico | | bat pegivirus | no rank | 8 | 0 |
| mexico | | bovine viral diarrhea virus 1 | species | 36 | 0 |
| mexico | | bovine viral diarrhea virus 2 | no rank | 1 | 0 |
| mexico | | bovine viral diarrhea virus 3 | species | 1 | 0 |
| mexico | | cell fusing agent virus | species | 7 | 0 |
| mexico | | classical swine fever virus | species | 7 | 0 |
| mexico | | culex flavivirus | species | 19 | 0 |
| mexico | | dengue virus | species | 14 | 6 |
| mexico | | dengue virus 1 | no rank | 185 | 0 |
| mexico | | dengue virus 2 | no rank | 88 | 0 |
| mexico | | dengue virus 3 | no rank | 3 | 1 |
| mexico | | dengue virus 4 | no rank | 7 | 0 |
| mexico | | hepatitis c virus | species | 343 | 0 |
| mexico | | hepatitis c virus subtype 1a | no rank | 25 | 0 |
| mexico | | hepatitis c virus subtype 1b | no rank | 11 | 0 |
| mexico | | hepatitis c virus subtype 2a | no rank | 2 | 0 |
| mexico | | hepatitis c virus subtype 2b | no rank | 5 | 0 |
| mexico | | hepatitis c virus subtype 3a | no rank | 3 | 0 |
| mexico | | st. louis encephalitis virus | species | 6 | 2 |
| mexico | | west nile virus | species | 21 | 15 |
| mexico | | zika virus | species | 24 | 0 |
| mexico | baja california | dengue virus | species | 0 | 4 |
| mexico | baja california | hepatitis c virus | species | 0 | 1 |
| mexico | baja california | west nile virus | species | 7 | 1 |
| mexico | baja california sur | dengue virus | species | 0 | 2 |
| mexico | baja california sur | dengue virus 2 | no rank | 1 | 0 |
| mexico | baja california sur | dengue virus 3 | no rank | 1 | 0 |
| mexico | campeche | dengue virus | species | 0 | 1 |
| mexico | campeche | dengue virus 2 | no rank | 1 | 0 |
| mexico | campeche | west nile virus | species | 0 | 3 |
| mexico | campeche | zika virus | species | 1 | 0 |
| mexico | chiapas | dengue virus | species | 0 | 11 |
| mexico | chiapas | dengue virus 1 | no rank | 3 | 0 |
| mexico | chiapas | dengue virus 2 | no rank | 4 | 0 |
| mexico | chiapas | dengue virus 3 | no rank | 4 | 0 |
| mexico | chiapas | dengue virus 4 | no rank | 2 | 0 |
| mexico | chiapas | ilheus virus | species | 0 | 1 |
| mexico | chiapas | st. louis encephalitis virus | species | 0 | 1 |
| mexico | chiapas | west nile virus | species | 5 | 3 |
| mexico | chiapas | zika virus | species | 73 | 1 |
| mexico | chihuahua | dengue virus | species | 0 | 1 |
| mexico | chihuahua | dengue virus 2 | no rank | 1 | 0 |
| mexico | chihuahua | st. louis encephalitis virus | species | 0 | 1 |
| mexico | chihuahua | west nile virus | species | 0 | 1 |
| mexico | coahuila zaragoza | bovine viral diarrhea virus 1 | species | 0 | 1 |
| mexico | coahuila zaragoza | dengue virus 2 | no rank | 1 | 0 |
| mexico | coahuila zaragoza | west nile virus | species | 0 | 1 |
| mexico | colima | cell fusing agent virus | species | 0 | 1 |
| mexico | colima | dengue virus | species | 0 | 9 |
| mexico | colima | flavivirus | genus | 0 | 1 |
| mexico | durango | hepatitis c virus | species | 0 | 3 |
| mexico | durango | st. louis encephalitis virus | species | 0 | 1 |
| mexico | federal district | dengue virus | species | 0 | 2 |
| mexico | federal district | dengue virus 2 | no rank | 3 | 0 |
| mexico | federal district | dengue virus 3 | no rank | 1 | 0 |
| mexico | federal district | hepacivirus | genus | 0 | 4 |
| mexico | federal district | hepatitis c virus | species | 0 | 14 |
| mexico | federal district | pestivirus a | species | 1 | 0 |
| mexico | federal district | west nile virus | species | 0 | 1 |
| mexico | guanajuato | dengue virus 1 | no rank | 1 | 0 |
| mexico | guanajuato | hepatitis c virus | species | 0 | 3 |
| mexico | guerrero | dengue virus | species | 0 | 12 |
| mexico | guerrero | dengue virus 1 | no rank | 2 | 1 |
| mexico | guerrero | dengue virus 2 | no rank | 1 | 0 |
| mexico | guerrero | hepatitis c virus | species | 0 | 1 |
| mexico | guerrero | zika virus | species | 13 | 0 |
| mexico | hidalgo | dengue virus 2 | no rank | 1 | 0 |
| mexico | jalisco | dengue virus | species | 0 | 2 |
| mexico | jalisco | dengue virus 1 | no rank | 11 | 0 |
| mexico | jalisco | dengue virus 2 | no rank | 1 | 0 |
| mexico | jalisco | dengue virus 4 | no rank | 1 | 0 |
| mexico | jalisco | hepacivirus | genus | 0 | 2 |
| mexico | jalisco | hepatitis c virus | species | 0 | 3 |
| mexico | mexico | dengue virus | species | 0 | 1 |
| mexico | mexico | dengue virus 2 | no rank | 2 | 1 |
| mexico | mexico | hepatitis c virus | species | 0 | 2 |
| mexico | mexico | west nile virus | species | 3 | 1 |
| mexico | michoacan ocampo | bovine viral diarrhea virus 1 | species | 0 | 1 |
| mexico | michoacan ocampo | dengue virus 1 | no rank | 3 | 0 |
| mexico | michoacan ocampo | dengue virus 2 | no rank | 1 | 0 |
| mexico | morelos | dengue virus | species | 0 | 8 |
| mexico | morelos | dengue virus 1 | no rank | 1 | 0 |
| mexico | morelos | dengue virus 2 | no rank | 2 | 0 |
| mexico | morelos | dengue virus 3 | no rank | 2 | 0 |
| mexico | morelos | west nile virus | species | 2 | 0 |
| mexico | morelos | zika virus | species | 2 | 0 |
| mexico | nayarit | dengue virus 2 | no rank | 2 | 0 |
| mexico | nuevo leon | bovine viral diarrhea virus 1 | species | 0 | 1 |
| mexico | nuevo leon | dengue virus | species | 0 | 2 |
| mexico | nuevo leon | dengue virus 2 | no rank | 3 | 0 |
| mexico | nuevo leon | flavivirus | genus | 0 | 1 |
| mexico | nuevo leon | hepacivirus | genus | 0 | 2 |
| mexico | nuevo leon | hepatitis c virus | species | 0 | 2 |
| mexico | nuevo leon | japanese encephalitis virus | species | 0 | 1 |
| mexico | nuevo leon | kunjin virus | no rank | 0 | 1 |
| mexico | nuevo leon | west nile virus | species | 2 | 3 |
| mexico | oaxaca | dengue virus | species | 0 | 5 |
| mexico | oaxaca | dengue virus 1 | no rank | 44 | 0 |
| mexico | oaxaca | dengue virus 2 | no rank | 243 | 0 |
| mexico | oaxaca | dengue virus 3 | no rank | 3 | 0 |
| mexico | oaxaca | flavivirus | genus | 0 | 1 |
| mexico | oaxaca | japanese encephalitis virus | species | 0 | 1 |
| mexico | oaxaca | st. louis encephalitis virus | species | 0 | 1 |
| mexico | oaxaca | west nile virus | species | 1 | 0 |
| mexico | oaxaca | yellow fever virus group | subgenus | 0 | 1 |
| mexico | oaxaca | zika virus | species | 7 | 0 |
| mexico | puebla | dengue virus | species | 0 | 1 |
| mexico | puebla | dengue virus 1 | no rank | 5 | 0 |
| mexico | puebla | dengue virus 3 | no rank | 3 | 0 |
| mexico | puebla | hepacivirus | genus | 0 | 2 |
| mexico | puebla | hepatitis c virus | species | 0 | 4 |
| mexico | puebla | ilheus virus | species | 0 | 1 |
| mexico | puebla | st. louis encephalitis virus | species | 0 | 1 |
| mexico | puebla | west nile virus | species | 0 | 1 |
| mexico | queretaro arteaga | dengue virus 1 | no rank | 16 | 0 |
| mexico | queretaro arteaga | zika virus | species | 2 | 0 |
| mexico | quintana roo | dengue virus | species | 0 | 1 |
| mexico | quintana roo | dengue virus 1 | no rank | 29 | 0 |
| mexico | quintana roo | dengue virus 2 | no rank | 2 | 1 |
| mexico | quintana roo | west nile virus | species | 0 | 1 |
| mexico | san luis potosi | dengue virus 2 | no rank | 5 | 0 |
| mexico | san luis potosi | dengue virus 4 | no rank | 1 | 0 |
| mexico | sinaloa | dengue virus | species | 0 | 3 |
| mexico | sinaloa | dengue virus 1 | no rank | 63 | 0 |
| mexico | sinaloa | dengue virus 2 | no rank | 3 | 0 |
| mexico | sinaloa | hepacivirus | genus | 0 | 1 |
| mexico | sinaloa | hepatitis c virus | species | 0 | 1 |
| mexico | sonora | dengue virus | species | 0 | 5 |
| mexico | sonora | dengue virus 1 | no rank | 6 | 0 |
| mexico | sonora | dengue virus 2 | no rank | 2 | 0 |
| mexico | sonora | st. louis encephalitis virus | species | 0 | 1 |
| mexico | sonora | west nile virus | species | 2 | 0 |
| mexico | sonora | yellow fever virus group | subgenus | 0 | 1 |
| mexico | tabasco | dengue virus | species | 0 | 2 |
| mexico | tabasco | dengue virus 1 | no rank | 16 | 0 |
| mexico | tabasco | dengue virus 2 | no rank | 1 | 0 |
| mexico | tabasco | dengue virus 3 | no rank | 2 | 0 |
| mexico | tabasco | dengue virus 4 | no rank | 38 | 0 |
| mexico | tabasco | west nile virus | species | 0 | 3 |
| mexico | tamaulipas | bovine viral diarrhea virus 1 | species | 0 | 1 |
| mexico | tamaulipas | dengue virus | species | 0 | 10 |
| mexico | tamaulipas | dengue virus 1 | no rank | 1 | 0 |
| mexico | tamaulipas | dengue virus 2 | no rank | 1 | 0 |
| mexico | tamaulipas | flavivirus | genus | 0 | 3 |
| mexico | tamaulipas | hepacivirus | genus | 0 | 1 |
| mexico | tamaulipas | hepatitis c virus | species | 0 | 1 |
| mexico | tamaulipas | st. louis encephalitis virus | species | 0 | 2 |
| mexico | tamaulipas | west nile virus | species | 1 | 1 |
| mexico | veracruz-llave | dengue virus | species | 0 | 8 |
| mexico | veracruz-llave | dengue virus 1 | no rank | 13 | 0 |
| mexico | veracruz-llave | dengue virus 2 | no rank | 30 | 1 |
| mexico | veracruz-llave | dengue virus 3 | no rank | 3 | 0 |
| mexico | veracruz-llave | dengue virus 4 | no rank | 2 | 0 |
| mexico | veracruz-llave | flavivirus | genus | 0 | 1 |
| mexico | veracruz-llave | hepacivirus | genus | 0 | 1 |
| mexico | veracruz-llave | hepatitis c virus | species | 0 | 4 |
| mexico | veracruz-llave | pestivirus a | species | 2 | 0 |
| mexico | veracruz-llave | zika virus | species | 1 | 1 |
| mexico | yucatan | aedes flavivirus | species | 2 | 1 |
| mexico | yucatan | bagaza virus | species | 0 | 1 |
| mexico | yucatan | bovine viral diarrhea virus 1 | species | 0 | 1 |
| mexico | yucatan | bussuquara virus | no rank | 0 | 2 |
| mexico | yucatan | cacipacore virus | species | 0 | 1 |
| mexico | yucatan | culex flavivirus | species | 1 | 3 |
| mexico | yucatan | dengue virus | species | 0 | 19 |
| mexico | yucatan | dengue virus 1 | no rank | 68 | 1 |
| mexico | yucatan | dengue virus 2 | no rank | 7 | 3 |
| mexico | yucatan | dengue virus 4 | no rank | 0 | 1 |
| mexico | yucatan | flavivirus | genus | 0 | 4 |
| mexico | yucatan | hepacivirus | genus | 0 | 3 |
| mexico | yucatan | hepatitis c virus | species | 0 | 5 |
| mexico | yucatan | iguape virus | no rank | 0 | 1 |
| mexico | yucatan | ilheus virus | species | 0 | 2 |
| mexico | yucatan | japanese encephalitis virus | species | 0 | 4 |
| mexico | yucatan | kamiti river virus | species | 0 | 2 |
| mexico | yucatan | modoc virus | species | 0 | 1 |
| mexico | yucatan | murray valley encephalitis virus | species | 0 | 1 |
| mexico | yucatan | nakiwogo virus | species | 0 | 1 |
| mexico | yucatan | rio bravo virus | species | 0 | 1 |
| mexico | yucatan | rocio virus | species | 0 | 2 |
| mexico | yucatan | st. louis encephalitis virus | species | 0 | 2 |
| mexico | yucatan | tamana bat virus | species | 0 | 2 |
| mexico | yucatan | t'ho virus | species | 0 | 2 |
| mexico | yucatan | usutu virus | species | 0 | 1 |
| mexico | yucatan | west nile virus | species | 0 | 7 |
| mexico | yucatan | yellow fever virus | species | 0 | 1 |
| mexico | yucatan | zika virus | species | 1 | 0 |
| micronesia | | bagaza virus | species | 0 | 1 |
| micronesia | | bovine viral diarrhea virus 1 | species | 0 | 1 |
| micronesia | | dengue virus | species | 0 | 21 |
| micronesia | | dengue virus 1 | no rank | 3 | 1 |
| micronesia | | dengue virus 4 | no rank | 4 | 0 |
| micronesia | | flavivirus | genus | 0 | 3 |
| micronesia | | hepatitis c virus | species | 0 | 4 |
| micronesia | | japanese encephalitis virus | species | 0 | 9 |
| micronesia | | tembusu virus | species | 0 | 1 |
| micronesia | | usutu virus | species | 0 | 1 |
| micronesia | | west nile virus | species | 0 | 5 |
| micronesia | | zika virus | species | 1 | 15 |
| micronesia | yap | dengue virus 2 | no rank | 3 | 0 |
| micronesia | yap | kunjin virus | no rank | 0 | 1 |
| micronesia | yap | murray valley encephalitis virus | species | 0 | 1 |
| micronesia | yap | powassan virus | species | 0 | 1 |
| micronesia | yap | spondweni virus | species | 0 | 3 |
| micronesia | yap | yellow fever virus | species | 0 | 1 |
| moldova | | hepatitis c virus | species | 113 | 0 |
| moldova | | tick-borne encephalitis virus | species | 9 | 0 |
| moldova | balti | hepatitis c virus | species | 0 | 2 |
| moldova | chisinau | hepatitis c virus | species | 0 | 2 |
| mongolia | | bovine viral diarrhea virus 1 | species | 8 | 0 |
| mongolia | | bovine viral diarrhea virus 2 | no rank | 1 | 0 |
| mongolia | | classical swine fever virus | species | 19 | 0 |
| mongolia | | equine hepacivirus | species | 5 | 0 |
| mongolia | | hepacivirus a | species | 140 | 0 |
| mongolia | | hepatitis c virus | species | 28 | 0 |
| mongolia | | hepatitis c virus subtype 1b | no rank | 60 | 0 |
| mongolia | | tick-borne encephalitis virus | species | 25 | 0 |
| mongolia | arkhangai province | bovine viral diarrhea virus 1 | species | 2 | 0 |
| mongolia | arkhangai province | bovine viral diarrhea virus 2 | no rank | 3 | 0 |
| mongolia | bulgan province | bovine viral diarrhea virus 1 | species | 0 | 1 |
| mongolia | bulgan province | bovine viral diarrhea virus 2 | no rank | 0 | 1 |
| mongolia | bulgan province | tick-borne encephalitis virus | species | 2 | 1 |
| mongolia | darkhan-uul province | classical swine fever virus | species | 1 | 0 |
| mongolia | dornod province | classical swine fever virus | species | 2 | 0 |
| mongolia | dornod province | japanese encephalitis virus | species | 0 | 1 |
| mongolia | khovd province | hepacivirus a | species | 4 | 0 |
| mongolia | orkhon province | tick-borne encephalitis virus | species | 15 | 0 |
| mongolia | selenge province | tick-borne encephalitis virus | species | 5 | 2 |
| mongolia | tov province | tick-borne encephalitis virus | species | 0 | 3 |
| mongolia | ulaanbaatar province | classical swine fever virus | species | 6 | 0 |
| mongolia | ulaanbaatar province | gb virus c | species | 0 | 1 |
| mongolia | ulaanbaatar province | hepacivirus | genus | 0 | 3 |
| mongolia | ulaanbaatar province | hepatitis c virus | species | 0 | 5 |
| mongolia | ulaanbaatar province | tick-borne encephalitis virus | species | 0 | 1 |
| montenegro | | hepatitis c virus | species | 33 | 0 |
| montenegro | podgorica | hepatitis c virus | species | 0 | 2 |
| montserrat | | dengue virus 4 | no rank | 3 | 0 |
| morocco | | canine hepacivirus | species | 2 | 0 |
| morocco | | dengue virus | species | 1 | 0 |
| morocco | | equine hepacivirus | species | 6 | 0 |
| morocco | | hepatitis c virus | species | 198 | 0 |
| morocco | | hepatitis c virus genotype 2 | no rank | 1 | 0 |
| morocco | | hepatitis c virus subtype 1a | no rank | 1 | 0 |
| morocco | | hepatitis c virus subtype 1b | no rank | 47 | 0 |
| morocco | | hepatitis c virus subtype 2a | no rank | 2 | 0 |
| morocco | | hepatitis c virus subtype 2b | no rank | 2 | 0 |
| morocco | | hepatitis c virus subtype 2i | no rank | 19 | 0 |
| morocco | | hepatitis c virus subtype 2k | no rank | 5 | 0 |
| morocco | | hepatitis c virus subtype 3a | no rank | 2 | 0 |
| morocco | | hepatitis c virus subtype 4a | no rank | 3 | 0 |
| morocco | | west nile virus | species | 4 | 0 |
| morocco | grand casablanca | hepacivirus | genus | 0 | 1 |
| morocco | grand casablanca | hepatitis c virus | species | 0 | 3 |
| morocco | marrakech-tensift-al haouz | flavivirus | genus | 0 | 2 |
| morocco | marrakech-tensift-al haouz | west nile virus | species | 0 | 1 |
| morocco | meknes-tafilalet | hepatitis c virus | species | 0 | 1 |
| mozambique | | cuacua virus | species | 1 |