Organism Interactions

We distinguish between carrier and cargo organisms. Carriers correspond to vectors or hosts whereas cargos correspond to potential pathogen, parasite, commensal etc.. This page shows the interactions between carriers and cargos plus potential evidence from the nucleotide database and/or pubmed. Please note that organism can interact with each other indirectly/recursively via their children. To obtain this information please navigate to a particular organism. You can click on numbers greater than zero in column sequences or publications to obtain potential evidence. Use the grid to filter (click funnel), sort (click on column name) or page (click on page numbers below).

Cargoes Carriers
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  • celluar organisms

Carrier(sorted ascending)
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Carrier Taxa
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Cargo
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Sequences
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Interaction Details
sus scrofa9823speciesmammalsenterococcus faecium engen00081138887no rank 70 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/italy/76687/2010(h1n2))1353044no rank 20 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/korea/pl01/2012(h3n2))1357697no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/iowa/a01432806/2013(h1n1))1357698no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/indiana/13tosu486/2013(h1n1))1366898no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/indiana/13tosu490/2013(h3n2))1366899no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/minnesota/a01397957/2013(h1n2))1379156no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/italy/166015/2010(h1n2))1353019no rank 20 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/italy/195639/2010(h1n2))1353026no rank 10 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/italy/196875/2008(h1n2))1353027no rank 20 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/italy/269578/2006(h1n2))1353035no rank 20 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/italy/274551/2011(h1n2))1353036no rank 20 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/italy/63580/2010(h1n2))1353043no rank 20 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/minnesota/a01381276/2013(h1n1))1346742no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/minnesota/a01350905/2013(h1n1))1348155no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/illinois/a01244623/2013(h1n2))1349392no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/illinois/a01432795/2013(h3n2))1349393no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/iowa/a01351140/2013(h1n1))1352819no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/italy/134110/2011(h1n2))1353018no rank 20 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/ohio/11sw238/2011(h1n2))1343769no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/south dakota/a01350648/2013(h1n2))1346232no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/south dakota/a01350803/2013(h3n2))1346235no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/kansas/13-112936/2013(h1n2))1346240no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/jy2/1931(h1n1))1346352no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/illinois/a01381319/2013(h1n1))1346741no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/indiana/a01260280/2013(h3n2))1341145no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/indiana/a01260283/2013(h1n2))1341146no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/indiana/a01076191/2010(h3n2))1135257no rank 90 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/minnesota/a01076196/2010(h3n2))1135258no rank 90 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/north carolina/a01076212/2010(h3n2))1135261no rank 90 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/ohio/11sw233/2011(mixed))1343768no rank 90 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/ohio/11sw133/2011(h1n2))1336717no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/ohio/11sw344/2011(h3n2))1336724no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/ohio/11sw349/2011(h3n2))1336725no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/korea/cy0423-12/2013(h1n2))1337100no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/korea/cy0423-33/2013(h1n2))1337101no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/minnesota/a01380666/2013(h1n2))1338478no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/north carolina/a01432666/2013(h1n2))1335604no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/jiangsu/s14/2011(h1n1))1335636no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/illinois/a01380437/2013(h1n2))1335720no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/nebraska/a01380413/2013(h1n1))1335721no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/north carolina/a01432728/2013(h1n2))1336013no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/virginia/a01432711/2013(h1n1))1336014no rank 60 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/north carolina/23592/2009(h3n2))1330449no rank 10 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/north carolina/6368/2012(h3n2))1330450no rank 10 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/iowa/a01379899/2013(h1n1))1331491no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/wyoming/a01380322/2013(h3n2))1334015no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/illinois/a01380195/2013(h1n1))1334016no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/north carolina/a01432660/2013(h1n2))1335603no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/wyoming/a01379329/2013(h1n1))1325954no rank 70 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsporcine stool-associated circular virus 31328032species 50 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/italy/218884-2/2012(h1n1))1328174no rank 90 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/italy/290104/2012(h1n1))1328175no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/italy/55230/2012(h1n1))1328176no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/north carolina/1026/2007(h3n2))1330448no rank 10 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/denmark/14738-1/2003(h1n1))1322243no rank 10 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/north carolina/a01432634/2013(h1n2))1324940no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/illinois/a01158947/2012(h1n2))1324948no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/ohio/a01116889/2011(h1n2))1324949no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalssapovirus swine/wgp15/usa/20091325151no rank 10 Latest Pubmed Search0click here
sus scrofa9823speciesmammalssapovirus swine/wgp190/usa/20091325152no rank 10 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/north carolina/a01202766/2011(h3n2))1133362no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/denmark/10282/2004(h1n1))1322224no rank 20 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/denmark/12813-1/2004(h1n1))1322232no rank 20 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/denmark/13160-1/2004(h1n1))1322233no rank 20 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/denmark/13380/2004(h1n2))1322235no rank 20 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/denmark/14348-9/2003(h3n2))1322242no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/ohio/12tosu50/2012(h3n2))1316508no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/nebraska/a01443969/2013(h1n2))1316811no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/argentina/cip051-a204/2012(h1n1))1317093no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/argentina/cip051-a207/2012(h1n1))1317094no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/ohio/a01349559/2013(h1n2))1317921no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/ohio/a01349572/2013(h1n2))1317922no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/thailand/pb484/2009(h3n2))1315825no rank 90 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/thailand/pb486/2009(h3n2))1315826no rank 100 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/nebraska/a01445765/2013(h1n2))1316157no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/kentucky/12tosu1054/2012(h1n2))1316495no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/ohio/12tosu45/2012(h1n1))1316500no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/ohio/12tosu409/2012(h3n2))1316503no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/south dakota/a01349306/2013(h1n1))1312860no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/thailand/cb072/2010(h1n1))1315806no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/thailand/cb143/2010(h1n1))1315807no rank 90 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/thailand/cs210/2010(h1n1))1315810no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/thailand/nr145/2010(h1n1))1315817no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/thailand/ry227/2010(h1n1))1315818no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/illinois/a01443719/2013(h1n1))1310117no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/illinois/a01443560/2013(h1n2))1310118no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/michigan/a01259034/2012(h3n2))1311771no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/minnesota/a01432544/2013(h3n2))1312374no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/north carolina/a01432566/2013(h3n2))1312375no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/ohio/a01349305/2013(h3n2))1312857no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/minnesota/a01349160/2013(h3n2))1305632no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/shanghai/y1/2009(h9n2))1305679no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/iowa/a01244529/2013(h1n1))1307091no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/iowa/a01432535/2013(h1n2))1307092no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/indiana/a00968322/2010(h3n2))1131591no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/minnesota/a01445352/2013(h1n2))1302280no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/kansas/13-105721b/2013(h1n2))1302696no rank 30 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/iowa/a0143271/2013(h1n1))1302988no rank 80 Latest Pubmed Search0click here
sus scrofa9823speciesmammalsinfluenza a virus (a/swine/south dakota/a01280755/2013(h1n1))1303383no rank 30 Latest Pubmed Search0click here
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